BLASTX nr result

ID: Cnidium21_contig00025258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025258
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|2...   238   9e-61
ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2,...   236   4e-60
ref|NP_001241220.1| uncharacterized protein LOC100815285 [Glycin...   232   6e-59
ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplas...   230   2e-58
ref|XP_003544794.1| PREDICTED: aspartate carbamoyltransferase 1,...   227   2e-57

>ref|XP_002300331.1| predicted protein [Populus trichocarpa] gi|222847589|gb|EEE85136.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  238 bits (607), Expect = 9e-61
 Identities = 118/148 (79%), Positives = 134/148 (90%)
 Frame = +2

Query: 269 RSRMQVRAMGVDKSPSFDKGNKFQLNDILEAQQFDRDTLSAIFEVAREMEKIEINSPGSR 448
           RSR+  + +G+  +PSF  G KFQL+D++EAQQFDR+ L+ IFEVA EMEK+E NSPGS+
Sbjct: 2   RSRIHSQLLGIQNTPSFSAGKKFQLDDLIEAQQFDREILADIFEVAHEMEKVEKNSPGSQ 61

Query: 449 ILKGYLMATLFYEPSTRTRLSFESSMKRLGGEVLTTENAREYSSAAKGETLEDTIRTVEG 628
           +LKGYLMATLFYEPSTRTRLSFES+MKRLGGEVLTTENARE+SSAAKGETLEDTIRTVEG
Sbjct: 62  VLKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEG 121

Query: 629 YSDIIVMRHFESGAAKRAANTASIPVIN 712
           YSDIIVMRHFESGAAKRAA TA +PVIN
Sbjct: 122 YSDIIVMRHFESGAAKRAAATAEVPVIN 149


>ref|XP_002277415.2| PREDICTED: aspartate carbamoyltransferase 2, chloroplastic-like
           [Vitis vinifera]
          Length = 403

 Score =  236 bits (601), Expect = 4e-60
 Identities = 129/196 (65%), Positives = 150/196 (76%), Gaps = 20/196 (10%)
 Frame = +2

Query: 185 EFMFGQSKFFKQSPEFKSIF-LSADNKYSR-------------------SRMQVRAMGVD 304
           EF+   S  + + P    +  LS D K+SR                   +R+   A+ ++
Sbjct: 26  EFVDNHSSLYSKQPLHSKLMPLSTDLKHSRFFTNEKPLQWEQTARLPQRNRVLSCALDIE 85

Query: 305 KSPSFDKGNKFQLNDILEAQQFDRDTLSAIFEVAREMEKIEINSPGSRILKGYLMATLFY 484
            +P F  GNKFQL+D++EAQQFDR+TLSAIFEVAREMEK+E  SPGS+ILKGYLMATLFY
Sbjct: 86  NTP-FSVGNKFQLDDVIEAQQFDRETLSAIFEVAREMEKVEKKSPGSQILKGYLMATLFY 144

Query: 485 EPSTRTRLSFESSMKRLGGEVLTTENAREYSSAAKGETLEDTIRTVEGYSDIIVMRHFES 664
           EPSTRTRLSFES+MKRLGGEVLTTENARE+SSAAKGETLEDTIRTVEGYSDIIVMRHFES
Sbjct: 145 EPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFES 204

Query: 665 GAAKRAANTASIPVIN 712
           GAA+RAA TA IP+IN
Sbjct: 205 GAARRAAVTAEIPIIN 220


>ref|NP_001241220.1| uncharacterized protein LOC100815285 [Glycine max]
           gi|255644754|gb|ACU22879.1| unknown [Glycine max]
          Length = 398

 Score =  232 bits (591), Expect = 6e-59
 Identities = 117/167 (70%), Positives = 140/167 (83%), Gaps = 4/167 (2%)
 Frame = +2

Query: 224 PEFKSIFLSADNKYS----RSRMQVRAMGVDKSPSFDKGNKFQLNDILEAQQFDRDTLSA 391
           P  +S+ ++  +K+     R  +  RA+ ++ +PSF  G KFQ +DI+EAQQFDRD LSA
Sbjct: 49  PNSRSLSMNMSSKWEQTDRRDALHCRALKIEPAPSFSVGQKFQFDDIIEAQQFDRDILSA 108

Query: 392 IFEVAREMEKIEINSPGSRILKGYLMATLFYEPSTRTRLSFESSMKRLGGEVLTTENARE 571
           IFEVAR ME +E +SPGS+ILKG+LMATLFYEPSTRTRLSFES+M+RLGGEVLTTENARE
Sbjct: 109 IFEVARNMENVEKDSPGSQILKGFLMATLFYEPSTRTRLSFESAMRRLGGEVLTTENARE 168

Query: 572 YSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKRAANTASIPVIN 712
           +SSAAKGETLEDTIRT+EGYSDIIVMRHFESGAA+RAA  A IP+IN
Sbjct: 169 FSSAAKGETLEDTIRTIEGYSDIIVMRHFESGAARRAAAIADIPIIN 215


>ref|XP_002529466.1| Aspartate carbamoyltransferase 2, chloroplast precursor, putative
           [Ricinus communis] gi|223531082|gb|EEF32932.1| Aspartate
           carbamoyltransferase 2, chloroplast precursor, putative
           [Ricinus communis]
          Length = 360

 Score =  230 bits (586), Expect = 2e-58
 Identities = 116/132 (87%), Positives = 125/132 (94%)
 Frame = +2

Query: 317 FDKGNKFQLNDILEAQQFDRDTLSAIFEVAREMEKIEINSPGSRILKGYLMATLFYEPST 496
           F  GN+FQL D++EAQQFDR+ L+AIFEVAREMEKIE NSPGS+ILKGYLMATLFYEPST
Sbjct: 46  FSTGNRFQLEDVIEAQQFDREILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPST 105

Query: 497 RTRLSFESSMKRLGGEVLTTENAREYSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAK 676
           RTRLSFES+MKRLGGEVLTTENARE+SSAAKGETLEDTIRTVEGYSDIIVMRHFESGAA+
Sbjct: 106 RTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAR 165

Query: 677 RAANTASIPVIN 712
           RAA TA IPVIN
Sbjct: 166 RAATTACIPVIN 177


>ref|XP_003544794.1| PREDICTED: aspartate carbamoyltransferase 1, chloroplastic-like
           [Glycine max]
          Length = 391

 Score =  227 bits (579), Expect = 2e-57
 Identities = 126/196 (64%), Positives = 147/196 (75%)
 Frame = +2

Query: 125 SACLLRNAMPFREAKGGYRNEFMFGQSKFFKQSPEFKSIFLSADNKYSRSRMQVRAMGVD 304
           S C L N  P+   K    ++  FG S  F++S           +K      +  A+ V+
Sbjct: 26  SPCCLLN-QPWNHLK----SKTPFGHSGVFEKS--------KLSHKGDEILWRAGALQVE 72

Query: 305 KSPSFDKGNKFQLNDILEAQQFDRDTLSAIFEVAREMEKIEINSPGSRILKGYLMATLFY 484
            +PSF  G KF L+D++EAQQFDR+TL+AIFEVAR ME IE  S  S++LKGYLMATLFY
Sbjct: 73  SAPSFSMGQKFHLHDVIEAQQFDRETLNAIFEVARSMESIESKSSRSQMLKGYLMATLFY 132

Query: 485 EPSTRTRLSFESSMKRLGGEVLTTENAREYSSAAKGETLEDTIRTVEGYSDIIVMRHFES 664
           EPSTRTRLSFES+MKRLGG+VLTTENARE+SSAAKGETLEDTIRTVEGY+DIIVMRHFES
Sbjct: 133 EPSTRTRLSFESAMKRLGGDVLTTENAREFSSAAKGETLEDTIRTVEGYTDIIVMRHFES 192

Query: 665 GAAKRAANTASIPVIN 712
           GAAKRAA TASIPVIN
Sbjct: 193 GAAKRAATTASIPVIN 208


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