BLASTX nr result

ID: Cnidium21_contig00025254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025254
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173957.1| PREDICTED: uncharacterized LOC101214537, par...    96   4e-18
ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214...    96   4e-18
gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]                96   4e-18
ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AA...    96   4e-18
ref|XP_003601896.1| hypothetical protein MTR_3g086550 [Medicago ...    94   1e-17

>ref|XP_004173957.1| PREDICTED: uncharacterized LOC101214537, partial [Cucumis sativus]
          Length = 187

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
 Frame = -3

Query: 542 EESASQQDISLYKEDGSLEIDFRSLIDVRLVKPNDTTFGKDATVKVGNENATSSLSDDKQ 363
           E+S  Q D + Y EDGSL+IDF SL+D+R+++  +    + A     N+  TS    +  
Sbjct: 56  EDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAV----NQEITSKQIAESS 111

Query: 362 KQTPD--------KGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSEGASKKSAPSYRAW 207
           K   +        +GNG+V+ WD  ++ L+ KK ELS++N W+   E +S + + SYRA 
Sbjct: 112 KHVHNNVDANNTRQGNGKVSAWDEISEALSAKKVELSKNNGWN--QEDSSGRKSWSYRAL 169

Query: 206 RGSALGPTMARLRSKQ 159
           RGSALGPTMA LRS++
Sbjct: 170 RGSALGPTMALLRSQK 185


>ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214537 [Cucumis sativus]
          Length = 612

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 8/136 (5%)
 Frame = -3

Query: 542 EESASQQDISLYKEDGSLEIDFRSLIDVRLVKPNDTTFGKDATVKVGNENATSSLSDDKQ 363
           E+S  Q D + Y EDGSL+IDF SL+D+R+++  +    + A     N+  TS    +  
Sbjct: 481 EDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAV----NQEITSKQIAESS 536

Query: 362 KQTPD--------KGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSEGASKKSAPSYRAW 207
           K   +        +GNG+V+ WD  ++ L+ KK ELS++N W+   E +S + + SYRA 
Sbjct: 537 KHVHNNVDANNTRQGNGKVSAWDEISEALSAKKVELSKNNGWN--QEDSSGRKSWSYRAL 594

Query: 206 RGSALGPTMARLRSKQ 159
           RGSALGPTMA LRS++
Sbjct: 595 RGSALGPTMALLRSQK 610


>gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]
          Length = 547

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
 Frame = -3

Query: 548 DGEESASQQDISLYKEDGSLEIDFRSLIDVRLVKPNDT---TFGKDATVKVGNENATSSL 378
           + ++   Q D SLYKEDGSLEI+F +L+DVR VK + +      K A  +         L
Sbjct: 414 EDDDFCMQPDTSLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPEPDQSAKKPKL 473

Query: 377 SDDKQKQTPDKGNGEVNLWDHFTKDLNTKKTELSE-DNSWSTWSEGASKKSAPSYRAWRG 201
           S +K+ QTP K NGEV+ W+  ++ L+ KK  LS+ +N W+   +G+S   + SY+A RG
Sbjct: 474 SANKELQTPAKENGEVSPWEELSEALSAKKAALSQANNGWN--KKGSSSGGSWSYKALRG 531

Query: 200 SALGPTMARLRSKQ 159
           SA+GP M  LRS++
Sbjct: 532 SAMGPVMNYLRSQK 545


>ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AAM13027.1| unknown
           protein [Arabidopsis thaliana]
           gi|22136510|gb|AAM91333.1| unknown protein [Arabidopsis
           thaliana] gi|332190840|gb|AEE28961.1| coilin
           [Arabidopsis thaliana]
          Length = 608

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
 Frame = -3

Query: 548 DGEESASQQDISLYKEDGSLEIDFRSLIDVRLVKPNDT---TFGKDATVKVGNENATSSL 378
           + ++   Q D SLYKEDGSLEI+F +L+DVR VK + +      K A  +         L
Sbjct: 475 EDDDFCMQPDTSLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPEPDQSAKKPKL 534

Query: 377 SDDKQKQTPDKGNGEVNLWDHFTKDLNTKKTELSE-DNSWSTWSEGASKKSAPSYRAWRG 201
           S +K+ QTP K NGEV+ W+  ++ L+ KK  LS+ +N W+   +G+S   + SY+A RG
Sbjct: 535 SANKELQTPAKENGEVSPWEELSEALSAKKAALSQANNGWN--KKGSSSGGSWSYKALRG 592

Query: 200 SALGPTMARLRSKQ 159
           SA+GP M  LRS++
Sbjct: 593 SAMGPVMNYLRSQK 606


>ref|XP_003601896.1| hypothetical protein MTR_3g086550 [Medicago truncatula]
            gi|355490944|gb|AES72147.1| hypothetical protein
            MTR_3g086550 [Medicago truncatula]
          Length = 782

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 59/150 (39%), Positives = 75/150 (50%), Gaps = 18/150 (12%)
 Frame = -3

Query: 551  LDGEESASQQDISLYKEDGSLEIDFRSLIDVRLVK------------------PNDTTFG 426
            +D + S SQ D S Y+EDGSLEID+ SL DVR++K                  P   T  
Sbjct: 631  MDEDGSPSQSDPSPYQEDGSLEIDYASLADVRIIKHGHSDLATVVAHSDAFVTPTKATNN 690

Query: 425  KDATVKVGNENATSSLSDDKQKQTPDKGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSE 246
                    NE A  S     +     K NGEVN+WD   + L  KKT LS+++ W    +
Sbjct: 691  STDEKPADNETAAGSSKPQIEGHVTAKENGEVNVWDEINEALKAKKTRLSQEDRWKKEGD 750

Query: 245  GASKKSAPSYRAWRGSALGPTMARLRSKQG 156
             +  +S  S RA R SALGPTMA LRS+ G
Sbjct: 751  SSENRSW-SQRALRCSALGPTMALLRSQNG 779


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