BLASTX nr result

ID: Cnidium21_contig00025253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025253
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arab...    99   6e-19
gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]                97   2e-18
ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AA...    97   2e-18
ref|XP_003601896.1| hypothetical protein MTR_3g086550 [Medicago ...    95   7e-18
ref|XP_004173957.1| PREDICTED: uncharacterized LOC101214537, par...    94   2e-17

>ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arabidopsis lyrata subsp.
           lyrata] gi|297338567|gb|EFH68984.1| hypothetical protein
           ARALYDRAFT_471456 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
 Frame = -3

Query: 558 DGEESASQQDISLYKEDGSLEIDFRALIDVRLVKPNDTTSGKDATVKVGEGPVGNENATS 379
           + ++ + + D +LYKEDGSLEI+F AL+DVR VK   T+S   A V     P  +++AT 
Sbjct: 471 EDDDFSMEPDTALYKEDGSLEIEFSALLDVRSVK---TSSSDSAEVAKSAPPEPDQSATK 527

Query: 378 I-LSDDKQKETPDKGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSEGASKKSAPSYRAW 202
           + LS +K  +TP K NG+VN W+  ++ L+ KK ELS+ N+       +S   + SY+A 
Sbjct: 528 LKLSANKDLQTPIKENGKVNPWEELSEALSAKKAELSQANNGWNKKGSSSGGGSWSYKAL 587

Query: 201 RGSALGPTMARIRSKQ 154
           RGSA+GP M  +RS++
Sbjct: 588 RGSAMGPVMNYLRSQK 603


>gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]
          Length = 547

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 59/137 (43%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
 Frame = -3

Query: 558 DGEESASQQDISLYKEDGSLEIDFRALIDVRLVKPNDTTSGKDATVKVGEGPVGNENATS 379
           + ++   Q D SLYKEDGSLEI+F AL+DVR VK   T+S   A V     P  +++A  
Sbjct: 414 EDDDFCMQPDTSLYKEDGSLEIEFSALLDVRSVK---TSSSDSAEVAKSALPEPDQSAKK 470

Query: 378 -ILSDDKQKETPDKGNGEVNLWDHFTKDLNTKKTELSE-DNSWSTWSEGASKKSAPSYRA 205
             LS +K+ +TP K NGEV+ W+  ++ L+ KK  LS+ +N W+   +G+S   + SY+A
Sbjct: 471 PKLSANKELQTPAKENGEVSPWEELSEALSAKKAALSQANNGWN--KKGSSSGGSWSYKA 528

Query: 204 WRGSALGPTMARIRSKQ 154
            RGSA+GP M  +RS++
Sbjct: 529 LRGSAMGPVMNYLRSQK 545


>ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AAM13027.1| unknown
           protein [Arabidopsis thaliana]
           gi|22136510|gb|AAM91333.1| unknown protein [Arabidopsis
           thaliana] gi|332190840|gb|AEE28961.1| coilin
           [Arabidopsis thaliana]
          Length = 608

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 59/137 (43%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
 Frame = -3

Query: 558 DGEESASQQDISLYKEDGSLEIDFRALIDVRLVKPNDTTSGKDATVKVGEGPVGNENATS 379
           + ++   Q D SLYKEDGSLEI+F AL+DVR VK   T+S   A V     P  +++A  
Sbjct: 475 EDDDFCMQPDTSLYKEDGSLEIEFSALLDVRSVK---TSSSDSAEVAKSALPEPDQSAKK 531

Query: 378 -ILSDDKQKETPDKGNGEVNLWDHFTKDLNTKKTELSE-DNSWSTWSEGASKKSAPSYRA 205
             LS +K+ +TP K NGEV+ W+  ++ L+ KK  LS+ +N W+   +G+S   + SY+A
Sbjct: 532 PKLSANKELQTPAKENGEVSPWEELSEALSAKKAALSQANNGWN--KKGSSSGGSWSYKA 589

Query: 204 WRGSALGPTMARIRSKQ 154
            RGSA+GP M  +RS++
Sbjct: 590 LRGSAMGPVMNYLRSQK 606


>ref|XP_003601896.1| hypothetical protein MTR_3g086550 [Medicago truncatula]
            gi|355490944|gb|AES72147.1| hypothetical protein
            MTR_3g086550 [Medicago truncatula]
          Length = 782

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 58/150 (38%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
 Frame = -3

Query: 561  LDGEESASQQDISLYKEDGSLEIDFRALIDVRLVKPNDT-------------TSGKDATV 421
            +D + S SQ D S Y+EDGSLEID+ +L DVR++K   +             T  K    
Sbjct: 631  MDEDGSPSQSDPSPYQEDGSLEIDYASLADVRIIKHGHSDLATVVAHSDAFVTPTKATNN 690

Query: 420  KVGEGPVGNENATSILSDDKQKETPDKGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSE 241
               E P  NE A        +     K NGEVN+WD   + L  KKT LS+++ W    +
Sbjct: 691  STDEKPADNETAAGSSKPQIEGHVTAKENGEVNVWDEINEALKAKKTRLSQEDRWKKEGD 750

Query: 240  GASKKSAPSYRAWRGSALGPTMARIRSKQG 151
             +  +S  S RA R SALGPTMA +RS+ G
Sbjct: 751  SSENRSW-SQRALRCSALGPTMALLRSQNG 779


>ref|XP_004173957.1| PREDICTED: uncharacterized LOC101214537, partial [Cucumis sativus]
          Length = 187

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/133 (39%), Positives = 84/133 (63%)
 Frame = -3

Query: 552 EESASQQDISLYKEDGSLEIDFRALIDVRLVKPNDTTSGKDATVKVGEGPVGNENATSIL 373
           E+S  Q D + Y EDGSL+IDF +L+D+R+++  +  S + A  +        E++  + 
Sbjct: 56  EDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSSRTAVNQEITSKQIAESSKHVH 115

Query: 372 SDDKQKETPDKGNGEVNLWDHFTKDLNTKKTELSEDNSWSTWSEGASKKSAPSYRAWRGS 193
           ++     T  +GNG+V+ WD  ++ L+ KK ELS++N W+   E +S + + SYRA RGS
Sbjct: 116 NNVDANNT-RQGNGKVSAWDEISEALSAKKVELSKNNGWN--QEDSSGRKSWSYRALRGS 172

Query: 192 ALGPTMARIRSKQ 154
           ALGPTMA +RS++
Sbjct: 173 ALGPTMALLRSQK 185


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