BLASTX nr result
ID: Cnidium21_contig00025241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00025241
(771 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris] 456 e-126
gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycin... 456 e-126
ref|YP_086946.1| photosystem II protein D1 [Panax ginseng] gi|75... 449 e-124
ref|YP_003934108.1| photosystem II protein D1 [Geranium palmatum... 449 e-124
ref|YP_538745.1| photosystem II protein D1 [Glycine max] gi|1312... 449 e-124
>gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]
Length = 359
Score = 456 bits (1173), Expect = e-126
Identities = 225/241 (93%), Positives = 227/241 (94%)
Frame = -2
Query: 725 INQNFLMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 546
+NQ+F MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1 MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60
Query: 545 APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 366
APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61 APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120
Query: 365 IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPL 186
IVLHFLLGVACYMGREWELSFRLGMRPWI VFLIYPIGQGSFSDGMPL
Sbjct: 121 IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180
Query: 185 GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 6
GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181 GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240
Query: 5 E 3
E
Sbjct: 241 E 241
>gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycine max]
Length = 359
Score = 456 bits (1173), Expect = e-126
Identities = 225/241 (93%), Positives = 227/241 (94%)
Frame = -2
Query: 725 INQNFLMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 546
+NQ+F MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1 MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60
Query: 545 APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 366
APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61 APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120
Query: 365 IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPL 186
IVLHFLLGVACYMGREWELSFRLGMRPWI VFLIYPIGQGSFSDGMPL
Sbjct: 121 IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180
Query: 185 GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 6
GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181 GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240
Query: 5 E 3
E
Sbjct: 241 E 241
>ref|YP_086946.1| photosystem II protein D1 [Panax ginseng]
gi|75254109|sp|Q68S26.1|PSBA_PANGI RecName:
Full=Photosystem Q(B) protein; AltName: Full=32 kDa
thylakoid membrane protein; AltName: Full=Photosystem II
protein D1; Flags: Precursor gi|51235293|gb|AAT98489.1|
PSII 32 kDa protein [Panax ginseng]
gi|290488428|gb|ADD30598.1| photosystem II protein D1
[Meliosma aff. cuneifolia Moore 333]
gi|408901308|gb|AFU95388.1| PsbA, partial (chloroplast)
[Caloncoba echinata] gi|408901324|gb|AFU95396.1| PsbA,
partial (chloroplast) [Euphronia guianensis]
Length = 353
Score = 449 bits (1155), Expect = e-124
Identities = 222/235 (94%), Positives = 222/235 (94%)
Frame = -2
Query: 707 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 528
MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 527 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 348
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 347 LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 168
LGVACYMGREWELSFRLGMRPWI VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 167 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 3
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
>ref|YP_003934108.1| photosystem II protein D1 [Geranium palmatum]
gi|313183802|ref|YP_004021645.1| photosystem II protein
D1 [Prunus persica] gi|325126845|ref|YP_004286082.1|
photosystem II protein A [Fragaria vesca subsp. vesca]
gi|346578171|ref|YP_004841763.1| phostosystem II protein
D1 [Cucumis melo subsp. melo]
gi|346683274|ref|YP_004842219.1| photosystem II protein
D1 [Pyrus pyrifolia] gi|377829856|ref|YP_005296080.1|
psbA gene product (chloroplast) [Pentactina rupicola]
gi|408830225|ref|YP_006883243.1| photosystem II protein
A (chloroplast) [Fragaria vesca subsp. bracteata]
gi|408830303|ref|YP_006883320.1| photosystem II protein
A [Fragaria mandshurica]
gi|428697179|ref|YP_007025363.1| photosystem II protein
A (chloroplast) [Fragaria chiloensis]
gi|428697265|ref|YP_007025448.1| photosystem II protein
A (chloroplast) [Fragaria virginiana]
gi|122202895|sp|Q2QDA8.1|PSBA_CUCSA RecName:
Full=Photosystem Q(B) protein; AltName: Full=32 kDa
thylakoid membrane protein; AltName: Full=Photosystem II
protein D1; Flags: Precursor gi|74027082|gb|AAZ94632.1|
PSII 32 kDa protein [Cucumis sativus]
gi|115432785|gb|ABI97398.1| photosystem II protein D1
[Cucumis sativus] gi|115498284|gb|ABI98726.1|
photosystem II protein D1 [Cucumis sativus]
gi|197132090|gb|ACH47563.1| photosystem II protein D1
[Geranium palmatum] gi|290488456|gb|ADD30612.1|
photosystem II protein D1 [Oxalis latifolia]
gi|300069286|gb|ADJ66407.1| photosystem II protein D1
[Geranium palmatum] gi|309321414|gb|ADO64955.1|
photosystem II protein D1 [Prunus persica]
gi|324022757|gb|ADY15331.1| photosystem II protein A
[Fragaria vesca subsp. vesca]
gi|344030471|gb|AEM76872.1| phostosystem II protein D1
[Cucumis melo subsp. melo] gi|345433541|dbj|BAK69363.1|
photosystem II protein D1 [Pyrus pyrifolia]
gi|357198718|gb|AET62634.1| photosystem II protein A
(chloroplast) [Fragaria chiloensis]
gi|357198804|gb|AET62719.1| photosystem II protein A
(chloroplast) [Fragaria virginiana]
gi|371532604|gb|AEX31714.1| PS II protein D1
(chloroplast) [Pentactina rupicola]
gi|378554687|gb|AFC17622.1| photosystem II protein A
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|378554765|gb|AFC17699.1| photosystem II protein A
[Fragaria mandshurica] gi|402239478|gb|AFQ39674.1|
photosystem II protein A [Fragaria vesca subsp.
americana] gi|402239481|gb|AFQ39676.1| photosystem II
protein A [Fragaria vesca subsp. vesca]
gi|402239484|gb|AFQ39678.1| photosystem II protein A
[Fragaria x bifera] gi|402239493|gb|AFQ39684.1|
photosystem II protein A [Fragaria virginiana]
gi|402239496|gb|AFQ39686.1| photosystem II protein A
[Fragaria bucharica] gi|402239514|gb|AFQ39698.1|
photosystem II protein A [Fragaria moupinensis]
gi|402239520|gb|AFQ39702.1| photosystem II protein A
[Fragaria daltoniana] gi|402239526|gb|AFQ39706.1|
photosystem II protein A [Fragaria gracilis]
gi|406365494|gb|AFS35574.1| photosystem II protein A
[Fragaria pentaphylla] gi|408901370|gb|AFU95419.1| PsbA,
partial (chloroplast) [Rhizophora mangle]
Length = 353
Score = 449 bits (1155), Expect = e-124
Identities = 222/235 (94%), Positives = 222/235 (94%)
Frame = -2
Query: 707 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 528
MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 527 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 348
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 347 LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 168
LGVACYMGREWELSFRLGMRPWI VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 167 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 3
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
>ref|YP_538745.1| photosystem II protein D1 [Glycine max]
gi|131258|sp|P02957.3|PSBA_SOYBN RecName:
Full=Photosystem Q(B) protein; AltName: Full=32 kDa
thylakoid membrane protein; AltName: Full=Photosystem II
protein D1; Flags: Precursor gi|11566|emb|CAA24986.1|
unnamed protein product [Glycine max]
gi|83595724|gb|ABC25105.1| photosystem II protein D1
[Glycine max]
Length = 353
Score = 449 bits (1155), Expect = e-124
Identities = 222/235 (94%), Positives = 222/235 (94%)
Frame = -2
Query: 707 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 528
MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 527 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 348
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 347 LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 168
LGVACYMGREWELSFRLGMRPWI VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 167 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 3
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235