BLASTX nr result

ID: Cnidium21_contig00025227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025227
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK43221.1| myb-related transcription factor [Panax ginseng]       278   1e-72
dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana...   269   7e-70
gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum] gi|...   265   2e-68
emb|CAA78387.1| protein 2 [Petunia x hybrida]                         261   2e-67
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...   260   3e-67

>gb|ACK43221.1| myb-related transcription factor [Panax ginseng]
          Length = 238

 Score =  278 bits (711), Expect = 1e-72
 Identities = 142/246 (57%), Positives = 168/246 (68%), Gaps = 5/246 (2%)
 Frame = +2

Query: 143 MVRVPCCDKMGLKKGPWTPEEDQLLISHVQQNGHANWRALPKQAGLLRCGKSCRLRWTNY 322
           M R PCC+KMGLKKGPWT EEDQ+LIS++QQ+GHANWRALPKQAGLLRCGKSCRLRW NY
Sbjct: 1   MGRAPCCEKMGLKKGPWTTEEDQVLISYIQQHGHANWRALPKQAGLLRCGKSCRLRWANY 60

Query: 323 LRPDIKRGNFSKEEEETIIRLHEVLGNRWSAMAAKLPGRTDNEIKNVWHTRIKKKLKNYQ 502
           LRPDIKRGNF+KEEE+TI +LHE+LGNRWSAMAAKLPGRTDNEIKNVWHT +KKKLKNYQ
Sbjct: 61  LRPDIKRGNFTKEEEDTIFQLHEMLGNRWSAMAAKLPGRTDNEIKNVWHTHLKKKLKNYQ 120

Query: 503 S-----TRDSKRQKNKESKIPNFLDHKENHGFGYGSISSQSCSEFLSVTYSQVLTIPDIA 667
                 T+     K+   K P+F    E  G   GS S            S V  +    
Sbjct: 121 PSSQVVTKQQSMIKSNGHKNPDFSARPEVCGPPQGSSSE----------LSSVTVMTTAV 170

Query: 668 KQEKLNSSNITFSEIRKRFLPGDTQADQDLKTWFEMDQELKCVESDDGKDFWYNLFIKAQ 847
           KQE+++SS  TF EI + F      +  +   +   + +L C   +DG DFWYNLFI+A 
Sbjct: 171 KQEQMDSSESTFPEIDESFWTQAEDSKMEFSEFRGPNDKLGCQMIEDGMDFWYNLFIRAG 230

Query: 848 GLQDLP 865
            L +LP
Sbjct: 231 ELPELP 236


>dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana tabacum]
          Length = 277

 Score =  269 bits (688), Expect = 7e-70
 Identities = 145/276 (52%), Positives = 180/276 (65%), Gaps = 35/276 (12%)
 Frame = +2

Query: 143 MVRVPCCDKMGLKKGPWTPEEDQLLISHVQQNGHANWRALPKQAGLLRCGKSCRLRWTNY 322
           M R PCC+KMGLKKGPWTPEEDQ+LIS +QQNGH NWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDQILISFIQQNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 323 LRPDIKRGNFSKEEEETIIRLHEVLGNRWSAMAAKLPGRTDNEIKNVWHTRIKKKLKNYQ 502
           LRPDIKRGNF+KEEE+TII+LHE+LGNRWSA+AAKLPGRTDNEIKNVWHT +KKKLK+Y+
Sbjct: 61  LRPDIKRGNFTKEEEDTIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 503 STRDSKR-QKNKESKIPNFLDHKENHGFGY---------GSISSQSCSEFLSVTYSQVLT 652
             ++ KR  KN +SK P   +   N    +          S+ + +  +  S T    +T
Sbjct: 121 PPQNPKRHSKNHDSKGPTTSESSNNSHLTFIYTQKHIIDSSVPAPNSPQISSSTEMSTVT 180

Query: 653 IPD----IAKQEKLNSSNITFSEIRKRF----LPGDTQ-----------ADQDLKTWF-- 769
           + D    + KQE++ SS   F EI + F    L  D             ADQ+L+     
Sbjct: 181 LVDDHQMVIKQEEMESSEY-FPEIDESFWTDKLSTDNNWSNTHDHVMVTADQELQVQLPF 239

Query: 770 ----EMDQELKCVESDDGKDFWYNLFIKAQGLQDLP 865
               E + ++   + +D  DFWYN+FIK   L +LP
Sbjct: 240 SSLKEENVDMLTTKMEDDMDFWYNVFIKTDDLPELP 275


>gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum]
           gi|6552363|dbj|BAA88223.1| myb-related transcription
           factor LBM3 [Nicotiana tabacum]
          Length = 278

 Score =  265 bits (676), Expect = 2e-68
 Identities = 140/277 (50%), Positives = 174/277 (62%), Gaps = 36/277 (12%)
 Frame = +2

Query: 143 MVRVPCCDKMGLKKGPWTPEEDQLLISHVQQNGHANWRALPKQAGLLRCGKSCRLRWTNY 322
           MVR PCC+KMGLKKGPW PEEDQ+LIS +Q NGH NWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWIPEEDQILISFIQTNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 323 LRPDIKRGNFSKEEEETIIRLHEVLGNRWSAMAAKLPGRTDNEIKNVWHTRIKKKLKNYQ 502
           LRPDIKRGNF+KEEEETII+LHE+LGNRWSA+AAKLPGRTDNEIKNVWHT +KKKLK+Y+
Sbjct: 61  LRPDIKRGNFTKEEEETIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 503 STRDSKR---QKNKESKIPNFLDHKENHGFGY--------GSISSQSCSEFLSVTYSQVL 649
             ++SKR    KN +SK P   +   N               + + +  +  S T    +
Sbjct: 121 PPQNSKRHSKSKNHDSKGPTTSESSNNSDLTIINTQKHIDSPVLAPNSPQISSSTEMSTV 180

Query: 650 TIPD-----IAKQEKLNSSNITFSEIRKRFLPGDTQADQD-------------------- 754
           T+ D     + KQE + SS   F EI + F   +   D +                    
Sbjct: 181 TLVDDHQMVVIKQEVMESSEY-FPEIDESFWTDELTTDNNWSSTDHVMVAANQELQVQLP 239

Query: 755 LKTWFEMDQELKCVESDDGKDFWYNLFIKAQGLQDLP 865
             ++ E + ++   + +D  DFWYN+FIK   L +LP
Sbjct: 240 FSSFKEENVDILATKMEDDMDFWYNVFIKTDDLPELP 276


>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score =  261 bits (667), Expect = 2e-67
 Identities = 142/279 (50%), Positives = 178/279 (63%), Gaps = 38/279 (13%)
 Frame = +2

Query: 143 MVRVPCCDKMGLKKGPWTPEEDQLLISHVQQNGHANWRALPKQAGLLRCGKSCRLRWTNY 322
           M R PCC+KMGLKKGPWTPEEDQ+L+S++++NGH NWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDQILVSYIEKNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 323 LRPDIKRGNFSKEEEETIIRLHEVLGNRWSAMAAKLPGRTDNEIKNVWHTRIKKKLKNYQ 502
           LRPDIKRGNF++EEE+TII+LHE+LGNRWSA+AA+LPGRTDNEIKNVWHT +KK+LKNYQ
Sbjct: 61  LRPDIKRGNFTREEEDTIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 503 STRDSKR--QKNKESKIPN---FLDHKENHGFGYGSI--------SSQSCSEFLSVTYSQ 643
             ++SKR  + N +SK P+    LD+ E+      +I        S Q  S   S   + 
Sbjct: 121 PPQNSKRHSKNNHDSKAPSTSKMLDNSESFSTIQENINEPMTGPNSPQRSSSESSTVTAD 180

Query: 644 VLTIPDIA-------KQEKLNSSNITFSEIRKRFLPGDTQADQDLKTWFEMDQELKCVE- 799
            L   D+        K E+++S    F EI + F   D     +L    E+  E   V+ 
Sbjct: 181 SLAATDVTNDDQTFIKHEEMDSYE-NFPEIDESFWTEDLSMGDNLDLDMEVAGEKSQVQF 239

Query: 800 -----------------SDDGKDFWYNLFIKAQGLQDLP 865
                             +D  DFWYN+FIKA+ L DLP
Sbjct: 240 PYSHDMKEQSVDMVGAKLEDDMDFWYNVFIKAEDLLDLP 278


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score =  260 bits (665), Expect = 3e-67
 Identities = 143/279 (51%), Positives = 184/279 (65%), Gaps = 38/279 (13%)
 Frame = +2

Query: 143 MVRVPCCDKMGLKKGPWTPEEDQLLISHVQQNGHANWRALPKQAGLLRCGKSCRLRWTNY 322
           MVR PCC+KMGLKKGPWTPEEDQ+L+S++Q NGH NWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQVLVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 323 LRPDIKRGNFSKEEEETIIRLHEVLGNRWSAMAAKLPGRTDNEIKNVWHTRIKKKLKNYQ 502
           LRPDIKRGNF++EEE++II+LHE+LGNRWSA+AA+LPGRTDNEIKNVWHT +KK+LKNYQ
Sbjct: 61  LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 503 STRDSKR--QKNKESKIP----------NFLDHKEN-HGFGYGSISSQ-SCSEFLSVTYS 640
             ++SK+  + N +SK P          NF + +E+ +G   G  S Q S SE  +VT  
Sbjct: 121 PPQNSKKHSKNNLDSKAPSTSQTFNNSDNFSNIQEDINGPVTGPNSPQRSSSEMSTVTAD 180

Query: 641 Q----VLTIPD---IAKQEKLNSSNITFSEIRKRFLPGDTQ-----------ADQDLKTW 766
                 +TI D     + +++NSS     EI + F   D               ++L+  
Sbjct: 181 STAMTTITIDDQNMFKQLDEMNSSESFIPEIDESFWTNDLSTGDNSNFDMEGTGEELQVQ 240

Query: 767 F------EMDQELKCVESDDGKDFWYNLFIKAQGLQDLP 865
           F      +   ++   + +D  DFWYN+FIK+  L DLP
Sbjct: 241 FPFSSVKQESMDMVGTKLEDDMDFWYNVFIKSGDLLDLP 279


Top