BLASTX nr result

ID: Cnidium21_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025218
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD08452.1| TATA box-binding protein associated factor 10 [F...    87   2e-15
gb|AEE36480.1| TBP-associated factor 10 [Solanum melongena]            84   1e-14
ref|XP_004138687.1| PREDICTED: transcription initiation factor T...    84   2e-14
ref|XP_002266754.1| PREDICTED: transcription initiation factor T...    84   2e-14
ref|XP_002515379.1| transcription factor, putative [Ricinus comm...    83   3e-14

>dbj|BAD08452.1| TATA box-binding protein associated factor 10 [Flaveria trinervia]
          Length = 136

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/63 (69%), Positives = 49/63 (77%)
 Frame = -1

Query: 378 QHCKARQAAVVXXXXXXXXXXXXLTLAMEDLSKALQEYGVNVKHQEYFADSPSAGLDAAS 199
           QHCKARQAAVV            L + MEDLSKALQEYGVNVKHQEYFAD+PSAGL++A+
Sbjct: 74  QHCKARQAAVVRDKKEKQQRDKRLIMNMEDLSKALQEYGVNVKHQEYFADNPSAGLESAA 133

Query: 198 RDE 190
           RDE
Sbjct: 134 RDE 136


>gb|AEE36480.1| TBP-associated factor 10 [Solanum melongena]
          Length = 103

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = -1

Query: 378 QHCKARQAAVVXXXXXXXXXXXXLTLAMEDLSKALQEYGVNVKHQEYFADSPSAGLDAAS 199
           QHCKARQ+ +V            LTL M+DLSK+L+EYGVNVKHQ+YFADSPSAGLD AS
Sbjct: 41  QHCKARQSTIVKDKRDKQQKDKRLTLTMDDLSKSLREYGVNVKHQDYFADSPSAGLDPAS 100

Query: 198 RDE 190
           R+E
Sbjct: 101 REE 103


>ref|XP_004138687.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
           [Cucumis sativus] gi|449493281|ref|XP_004159243.1|
           PREDICTED: transcription initiation factor TFIID subunit
           10-like [Cucumis sativus]
          Length = 136

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = -1

Query: 378 QHCKARQAAVVXXXXXXXXXXXXLTLAMEDLSKALQEYGVNVKHQEYFADSPSAGLDAAS 199
           QHCKARQAAVV            L L M+DLSKAL+EYGVNVKHQEYFADSPS G+D+ S
Sbjct: 74  QHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEYFADSPSTGVDSTS 133

Query: 198 RDE 190
           R+E
Sbjct: 134 REE 136


>ref|XP_002266754.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143597|emb|CBI22350.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/63 (68%), Positives = 47/63 (74%)
 Frame = -1

Query: 378 QHCKARQAAVVXXXXXXXXXXXXLTLAMEDLSKALQEYGVNVKHQEYFADSPSAGLDAAS 199
           Q CKARQ+AVV            L L MEDLSKAL+EYGVNVKHQEYFADSPS+G+D AS
Sbjct: 74  QQCKARQSAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYFADSPSSGMDPAS 133

Query: 198 RDE 190
           RDE
Sbjct: 134 RDE 136


>ref|XP_002515379.1| transcription factor, putative [Ricinus communis]
           gi|223545323|gb|EEF46828.1| transcription factor,
           putative [Ricinus communis]
          Length = 143

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/63 (68%), Positives = 45/63 (71%)
 Frame = -1

Query: 378 QHCKARQAAVVXXXXXXXXXXXXLTLAMEDLSKALQEYGVNVKHQEYFADSPSAGLDAAS 199
           Q CKARQ+AVV            L L MEDLSKAL EYGVNVKHQEYFADSPS G+D AS
Sbjct: 81  QQCKARQSAVVKDKREKQQKDKRLILTMEDLSKALHEYGVNVKHQEYFADSPSTGMDPAS 140

Query: 198 RDE 190
           RDE
Sbjct: 141 RDE 143


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