BLASTX nr result

ID: Cnidium21_contig00025217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025217
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138687.1| PREDICTED: transcription initiation factor T...   203   1e-50
dbj|BAD08452.1| TATA box-binding protein associated factor 10 [F...   200   1e-49
ref|XP_002324360.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002266754.1| PREDICTED: transcription initiation factor T...   199   2e-49
ref|XP_002515379.1| transcription factor, putative [Ricinus comm...   199   2e-49

>ref|XP_004138687.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
           [Cucumis sativus] gi|449493281|ref|XP_004159243.1|
           PREDICTED: transcription initiation factor TFIID subunit
           10-like [Cucumis sativus]
          Length = 136

 Score =  203 bits (516), Expect = 1e-50
 Identities = 100/136 (73%), Positives = 111/136 (81%)
 Frame = +3

Query: 24  MNQRQQLEENRHDDDAALSNFLASLMDYTPTIPDELAEHYLAKSGFQCPDVRLVRLVAVA 203
           MN  QQ   +RHDDDAALS FLASLM+YTPTIPDEL EHYL KSGFQCPDVRL+RLVAVA
Sbjct: 1   MNHNQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 204 TQKFIADVATDALQHCKARQAAVVXXXXXXXXXXXXXTLAMEDLSKALQEYGVNVKHQEY 383
           TQKF+ADVA+DALQHCKARQAAVV              L M+DLSKAL+EYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 384 FADSPSAGLDAATRDE 431
           FADSPS G+D+ +R+E
Sbjct: 121 FADSPSTGVDSTSREE 136


>dbj|BAD08452.1| TATA box-binding protein associated factor 10 [Flaveria trinervia]
          Length = 136

 Score =  200 bits (508), Expect = 1e-49
 Identities = 100/136 (73%), Positives = 109/136 (80%)
 Frame = +3

Query: 24  MNQRQQLEENRHDDDAALSNFLASLMDYTPTIPDELAEHYLAKSGFQCPDVRLVRLVAVA 203
           MN  QQ  E RHDD+ ALS+FLASL DYTPTIPDEL EHYLAKSGFQCPDVRL RLVAVA
Sbjct: 1   MNHNQQSNEVRHDDENALSDFLASLTDYTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVA 60

Query: 204 TQKFIADVATDALQHCKARQAAVVXXXXXXXXXXXXXTLAMEDLSKALQEYGVNVKHQEY 383
            QKF++D+A DALQHCKARQAAVV              + MEDLSKALQEYGVNVKHQEY
Sbjct: 61  AQKFVSDIAIDALQHCKARQAAVVRDKKEKQQRDKRLIMNMEDLSKALQEYGVNVKHQEY 120

Query: 384 FADSPSAGLDAATRDE 431
           FAD+PSAGL++A RDE
Sbjct: 121 FADNPSAGLESAARDE 136


>ref|XP_002324360.1| predicted protein [Populus trichocarpa] gi|222865794|gb|EEF02925.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  199 bits (507), Expect = 2e-49
 Identities = 101/134 (75%), Positives = 107/134 (79%)
 Frame = +3

Query: 30  QRQQLEENRHDDDAALSNFLASLMDYTPTIPDELAEHYLAKSGFQCPDVRLVRLVAVATQ 209
           Q+QQ  E RHDDDA L+ FLASLMDYTPTIPDEL EHYLAKSGFQCPDVRLVRLVAVATQ
Sbjct: 11  QQQQSSEARHDDDAVLTEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLVRLVAVATQ 70

Query: 210 KFIADVATDALQHCKARQAAVVXXXXXXXXXXXXXTLAMEDLSKALQEYGVNVKHQEYFA 389
           KF+ADVATDALQ CKAR A VV              L MEDLSKAL EYGVNVKHQEYFA
Sbjct: 71  KFVADVATDALQQCKARPAPVVKDKRDKQQKEKRLILTMEDLSKALSEYGVNVKHQEYFA 130

Query: 390 DSPSAGLDAATRDE 431
           DSPS G+D A+R+E
Sbjct: 131 DSPSTGMDPASREE 144


>ref|XP_002266754.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143597|emb|CBI22350.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  199 bits (507), Expect = 2e-49
 Identities = 99/136 (72%), Positives = 112/136 (82%)
 Frame = +3

Query: 24  MNQRQQLEENRHDDDAALSNFLASLMDYTPTIPDELAEHYLAKSGFQCPDVRLVRLVAVA 203
           MNQ Q   + RHDDD+ALS+FLASL+DYTPTIPDEL EHYLAKSGFQCPDVRL+RLVAVA
Sbjct: 1   MNQNQGGNDARHDDDSALSDFLASLVDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 204 TQKFIADVATDALQHCKARQAAVVXXXXXXXXXXXXXTLAMEDLSKALQEYGVNVKHQEY 383
           TQKF+ +VA+DALQ CKARQ+AVV              L MEDLSKAL+EYGVNVKHQEY
Sbjct: 61  TQKFVTEVASDALQQCKARQSAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 384 FADSPSAGLDAATRDE 431
           FADSPS+G+D A+RDE
Sbjct: 121 FADSPSSGMDPASRDE 136


>ref|XP_002515379.1| transcription factor, putative [Ricinus communis]
           gi|223545323|gb|EEF46828.1| transcription factor,
           putative [Ricinus communis]
          Length = 143

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/134 (73%), Positives = 108/134 (80%)
 Frame = +3

Query: 30  QRQQLEENRHDDDAALSNFLASLMDYTPTIPDELAEHYLAKSGFQCPDVRLVRLVAVATQ 209
           Q+QQ  + RHDDDAAL+ FL+SLMDYTPTIPDEL EHYL KSGFQCPDVRLVRLVAVATQ
Sbjct: 10  QQQQSSDGRHDDDAALTEFLSSLMDYTPTIPDELVEHYLGKSGFQCPDVRLVRLVAVATQ 69

Query: 210 KFIADVATDALQHCKARQAAVVXXXXXXXXXXXXXTLAMEDLSKALQEYGVNVKHQEYFA 389
           KF+A+VA DALQ CKARQ+AVV              L MEDLSKAL EYGVNVKHQEYFA
Sbjct: 70  KFVAEVANDALQQCKARQSAVVKDKREKQQKDKRLILTMEDLSKALHEYGVNVKHQEYFA 129

Query: 390 DSPSAGLDAATRDE 431
           DSPS G+D A+RDE
Sbjct: 130 DSPSTGMDPASRDE 143


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