BLASTX nr result

ID: Cnidium21_contig00025215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025215
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S...   129   3e-28
gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R...   127   9e-28
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]             125   3e-27
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali...   125   5e-27
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]            121   5e-26

>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
           gi|241931317|gb|EES04462.1| hypothetical protein
           SORBIDRAFT_04g002725 [Sorghum bicolor]
          Length = 604

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/157 (40%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
 Frame = -1

Query: 470 VDNASANDSMVRHLKSWL--SDRVPCAGDFFHVRCSAHILNLVIQDGLVLIKPLLDNIRG 297
           +DNA++N++M+  LK+ L   D + C GD FHVRC+AH++NL+++DGL  I  +++NIR 
Sbjct: 223 LDNATSNNTMMDILKANLLKMDLLHCDGDLFHVRCAAHVINLIVKDGLQAIDGVINNIRE 282

Query: 296 TVRYLNKSSYGKQKLDLVVSQLKLQGKK*IPMDVQHRWDSTYDMLDVALNYEEAFSRLEG 117
           +V+Y+  S   K+K + ++ +L ++ +    +DV +RW+STYDM+  A+ +++AF  L+ 
Sbjct: 283 SVKYIRGSQSRKEKFEDIIEELGIRCRSAPQIDVANRWNSTYDMIQSAMPFKDAFLELKV 342

Query: 116 MDKNYKFNPSKEEWKVARLVHYCLKMFKDATVHFSGT 6
            D NY + PS ++W+ A  V   LK+FK AT   SG+
Sbjct: 343 KDSNYTYCPSSQDWQRANAVCKLLKVFKKATKVVSGS 379


>gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R570]
          Length = 607

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/157 (40%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
 Frame = -1

Query: 470 VDNASANDSMVRHLKSWL--SDRVPCAGDFFHVRCSAHILNLVIQDGLVLIKPLLDNIRG 297
           +DNA+ N++M+  LK+ L   D + C GD FH+RC+AH++NL+++DGL  I  +++NIR 
Sbjct: 227 LDNAATNNTMMDILKANLLKMDMLHCDGDLFHIRCAAHVINLIVKDGLQAIDGVINNIRE 286

Query: 296 TVRYLNKSSYGKQKLDLVVSQLKLQGKK*IPMDVQHRWDSTYDMLDVALNYEEAFSRLEG 117
           +V+Y+  S   K+K + +V +L ++ +    +DV++RW+ST DM++ A+ ++EAF  L+ 
Sbjct: 287 SVKYVRASQSRKEKFEDIVVELGIRCRSVPKIDVENRWNSTCDMIESAMPFKEAFLELKV 346

Query: 116 MDKNYKFNPSKEEWKVARLVHYCLKMFKDATVHFSGT 6
            D NY + PS ++W+ A  V   LK+FK A    SGT
Sbjct: 347 KDSNYSYCPSSQDWERANAVCKLLKVFKKAMEVVSGT 383


>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/155 (42%), Positives = 94/155 (60%)
 Frame = -1

Query: 470 VDNASANDSMVRHLKSWLSDRVPCAGDFFHVRCSAHILNLVIQDGLVLIKPLLDNIRGTV 291
           VDNASAND+M   LK  L   + C+G+FFHVRCSAHILNL++QDGL +I   L+ IR TV
Sbjct: 348 VDNASANDTMQSILKRKLQKHLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETV 407

Query: 290 RYLNKSSYGKQKLDLVVSQLKLQGKK*IPMDVQHRWDSTYDMLDVALNYEEAFSRLEGMD 111
           +Y+  S   +      +  + +Q +  + +DV  RW+STY ML  A+ +++    L  +D
Sbjct: 408 KYVKGSETRENLFQNCMDTIGIQTEASLVLDVSTRWNSTYHMLSRAIQFKDVLHSLAEVD 467

Query: 110 KNYKFNPSKEEWKVARLVHYCLKMFKDATVHFSGT 6
           + YK  PS  EW+ A L+   LK F + T   SG+
Sbjct: 468 RGYKSFPSAVEWERAELICDLLKPFAEITKLISGS 502


>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
          Length = 577

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/155 (42%), Positives = 94/155 (60%)
 Frame = -1

Query: 470 VDNASANDSMVRHLKSWLSDRVPCAGDFFHVRCSAHILNLVIQDGLVLIKPLLDNIRGTV 291
           VDNASAND+M   LK  L   + C+G+FFHVRCSAHILNL++QDGL +I   L+ IR TV
Sbjct: 165 VDNASANDTMQSILKRKLQKDLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETV 224

Query: 290 RYLNKSSYGKQKLDLVVSQLKLQGKK*IPMDVQHRWDSTYDMLDVALNYEEAFSRLEGMD 111
           +Y+  S   +      +  + +Q +  + +DV  RW+STY ML  A+ +++    L  +D
Sbjct: 225 KYVKGSETRENLFQNCMDTIGIQTEANLVLDVSTRWNSTYHMLSRAIQFKDVLRSLAEVD 284

Query: 110 KNYKFNPSKEEWKVARLVHYCLKMFKDATVHFSGT 6
           + YK  PS  EW+ A L+   LK F + T   SG+
Sbjct: 285 RGYKSFPSAVEWERAELICDLLKPFAEITKLISGS 319


>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
          Length = 633

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/149 (42%), Positives = 91/149 (61%)
 Frame = -1

Query: 470 VDNASANDSMVRHLKSWLSDRVPCAGDFFHVRCSAHILNLVIQDGLVLIKPLLDNIRGTV 291
           VDNASAND+M   LK  L   + C+G+FFHVRCSAHILNL++QDGL +I   L+ IR TV
Sbjct: 258 VDNASANDTMQSILKRKLQKDLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETV 317

Query: 290 RYLNKSSYGKQKLDLVVSQLKLQGKK*IPMDVQHRWDSTYDMLDVALNYEEAFSRLEGMD 111
           +Y+  S   +      +  + +Q +  + +DV  RW+STY ML  A+ +++    L  +D
Sbjct: 318 KYVKGSETRENLFQNCMDTIGIQTEASLVLDVSTRWNSTYHMLSRAIQFKDVLRSLAEVD 377

Query: 110 KNYKFNPSKEEWKVARLVHYCLKMFKDAT 24
           + YK  PS  EW+ A L+   LK F + T
Sbjct: 378 RVYKSFPSAVEWERAELICDLLKPFAEIT 406


Top