BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025148
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   150   1e-34
gb|AFK43162.1| unknown [Medicago truncatula]                          149   2e-34
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   149   2e-34

>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/114 (62%), Positives = 93/114 (81%)
 Frame = -1

Query: 345 LSSFIDNGSKESHRYYLSRRTVLEMLRDRGYSVPDYEIEMSLHQFRGIYGQSPHTSRLRI 166
           LSSF+D GS ESHRYYLSRRTVLEML+DRGYSVP  EI++SL  FRG+YGQ+P    L+ 
Sbjct: 8   LSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKF 67

Query: 165 SASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQ 4
           SA+H+S PSK++LV+FC  G++KV  +R I  QITD++SL+ LI+V+Q+ IT+Q
Sbjct: 68  SATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQ 121


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/125 (59%), Positives = 93/125 (74%)
 Frame = -1

Query: 378 DDGAELRQKGSLSSFIDNGSKESHRYYLSRRTVLEMLRDRGYSVPDYEIEMSLHQFRGIY 199
           D   +   K  LSSF+D G  ESHRYYL+RRT+LEMLRDRGYS+P  +I++SL  FR  Y
Sbjct: 111 DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 170

Query: 198 GQSPHTSRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQD 19
            Q P   RLRISA+  S PSKKILV+FC P ++KVN +RSIA QI +K+SLS+LI+V+Q+
Sbjct: 171 SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 230

Query: 18  KITDQ 4
            IT Q
Sbjct: 231 HITSQ 235


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/125 (59%), Positives = 93/125 (74%)
 Frame = -1

Query: 378 DDGAELRQKGSLSSFIDNGSKESHRYYLSRRTVLEMLRDRGYSVPDYEIEMSLHQFRGIY 199
           D   +   K  LSSF+D G  ESHRYYL+RRT+LEMLRDRGYS+P  +I++SL  FR  Y
Sbjct: 10  DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 69

Query: 198 GQSPHTSRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQD 19
            Q P   RLRISA+  S PSKKILV+FC P ++KVN +RSIA QI +K+SLS+LI+V+Q+
Sbjct: 70  SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 129

Query: 18  KITDQ 4
            IT Q
Sbjct: 130 HITSQ 134


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/109 (66%), Positives = 92/109 (84%)
 Frame = -1

Query: 330 DNGSKESHRYYLSRRTVLEMLRDRGYSVPDYEIEMSLHQFRGIYGQSPHTSRLRISASHE 151
           DNGS ESHRYYLSRRTVLEML+DRGYS+P  EI++SL  FR I+GQSP   RLR++A+H 
Sbjct: 45  DNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHA 104

Query: 150 SSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQ 4
           ++PSK+ILVVF  PGI+KVN VR IAGQI ++ESL+ LI+++Q++IT Q
Sbjct: 105 TNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQ 153


>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/109 (66%), Positives = 92/109 (84%)
 Frame = -1

Query: 330 DNGSKESHRYYLSRRTVLEMLRDRGYSVPDYEIEMSLHQFRGIYGQSPHTSRLRISASHE 151
           DNGS ESHRYYLSRRTVLEML+DRGYS+P  EI++SL  FR I+GQSP   RLR++A+H 
Sbjct: 45  DNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHA 104

Query: 150 SSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQ 4
           ++PSK+ILVVF  PGI+KVN VR IAGQI ++ESL+ LI+++Q++IT Q
Sbjct: 105 TNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQ 153