BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025147
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   155   3e-36
gb|AFK43162.1| unknown [Medicago truncatula]                          154   9e-36
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   154   9e-36

>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/117 (64%), Positives = 97/117 (82%)
 Frame = +1

Query: 37  LSSFIDYGSKESHRYYLSRRTVLEMLRDRGYSVPDSEIEMSLHQFRGIYGQSPDTSRLRI 216
           LSSF+D GS ESHRYYLSRRTVLEML+DRGYSVP SEI++SL  FRG+YGQ+PD   L+ 
Sbjct: 8   LSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKF 67

Query: 217 SASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQGMK 387
           SA+H+S PSK++LV+FC  G++KV  +R I  QITD++SL+ LI+V+Q+ IT+Q MK
Sbjct: 68  SATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 124


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/128 (59%), Positives = 97/128 (75%)
 Frame = +1

Query: 4   DDGAELKQKESLSSFIDYGSKESHRYYLSRRTVLEMLRDRGYSVPDSEIEMSLHQFRGIY 183
           D   + + K  LSSF+D G  ESHRYYL+RRT+LEMLRDRGYS+P  +I++SL  FR  Y
Sbjct: 111 DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 170

Query: 184 GQSPDTSRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQD 363
            Q PD  RLRISA+  S PSKKILV+FC P ++KVN +RSIA QI +K+SLS+LI+V+Q+
Sbjct: 171 SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 230

Query: 364 KITDQGMK 387
            IT Q +K
Sbjct: 231 HITSQALK 238


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/128 (59%), Positives = 97/128 (75%)
 Frame = +1

Query: 4   DDGAELKQKESLSSFIDYGSKESHRYYLSRRTVLEMLRDRGYSVPDSEIEMSLHQFRGIY 183
           D   + + K  LSSF+D G  ESHRYYL+RRT+LEMLRDRGYS+P  +I++SL  FR  Y
Sbjct: 10  DLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFY 69

Query: 184 GQSPDTSRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQD 363
            Q PD  RLRISA+  S PSKKILV+FC P ++KVN +RSIA QI +K+SLS+LI+V+Q+
Sbjct: 70  SQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQN 129

Query: 364 KITDQGMK 387
            IT Q +K
Sbjct: 130 HITSQALK 137


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/122 (61%), Positives = 99/122 (81%)
 Frame = +1

Query: 22  KQKESLSSFIDYGSKESHRYYLSRRTVLEMLRDRGYSVPDSEIEMSLHQFRGIYGQSPDT 201
           +Q + L +  D GS ESHRYYLSRRTVLEML+DRGYS+P  EI++SL  FR I+GQSPD 
Sbjct: 35  EQPQCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDV 94

Query: 202 SRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQG 381
            RLR++A+H ++PSK+ILVVF  PGI+KVN VR IAGQI ++ESL+ LI+++Q++IT Q 
Sbjct: 95  DRLRLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQA 154

Query: 382 MK 387
           +K
Sbjct: 155 LK 156


>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/122 (61%), Positives = 99/122 (81%)
 Frame = +1

Query: 22  KQKESLSSFIDYGSKESHRYYLSRRTVLEMLRDRGYSVPDSEIEMSLHQFRGIYGQSPDT 201
           +Q + L +  D GS ESHRYYLSRRTVLEML+DRGYS+P  EI++SL  FR I+GQSPD 
Sbjct: 35  EQPQCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDV 94

Query: 202 SRLRISASHESSPSKKILVVFCDPGIMKVNQVRSIAGQITDKESLSRLIVVIQDKITDQG 381
            RLR++A+H ++PSK+ILVVF  PGI+KVN VR IAGQI ++ESL+ LI+++Q++IT Q 
Sbjct: 95  DRLRLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQA 154

Query: 382 MK 387
           +K
Sbjct: 155 LK 156