BLASTX nr result

ID: Cnidium21_contig00025116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025116
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003537333.1| PREDICTED: structure-specific endonuclease s...    63   3e-08
ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...    61   8e-08
emb|CBI15837.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|222857794|gb|EEE95341.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 243 GEAQEEDGDFFACYLLTSLSPRYKGHTYIGFTVNPK 350
           GEA++    FFACYLLTSL PR+KGHTYIGFTVNP+
Sbjct: 3   GEAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPR 38


>ref|XP_003537333.1| PREDICTED: structure-specific endonuclease subunit SLX1-like
           [Glycine max]
          Length = 380

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/66 (50%), Positives = 40/66 (60%)
 Frame = +3

Query: 153 KKGRSVGSKSEDCEIFGCKNVNPSDTTRPRGEAQEEDGDFFACYLLTSLSPRYKGHTYIG 332
           +K  SV  + E  +  G  N N ++     G        FFACYLLTSLSPR+KGHTYIG
Sbjct: 4   RKVASVIEEEESVQNHGHNNQNENEDCEGNG--------FFACYLLTSLSPRFKGHTYIG 55

Query: 333 FTVNPK 350
           FTVNP+
Sbjct: 56  FTVNPR 61


>ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|222862530|gb|EEF00037.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +3

Query: 216 NPSDTTRPRGEAQEEDGD-FFACYLLTSLSPRYKGHTYIGFTVNPK 350
           NP       GEA E+  + FFACYLLTSL PR+KGHTYIGFTVNP+
Sbjct: 8   NPPQEIVEEGEAAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPR 53


>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 207 KNVNPSDTTRPRGEAQEEDGDFFACYLLTSLSPRYKGHTYIGFTVNPK 350
           K    S+ +     ++E+  DFFACYLL SLSPR+KGH+YIGFTVNP+
Sbjct: 3   KRKGRSEISEETLNSEEKGDDFFACYLLASLSPRHKGHSYIGFTVNPR 50


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 207 KNVNPSDTTRPRGEAQEEDGDFFACYLLTSLSPRYKGHTYIGFTVNPK 350
           K    S+ +     ++E+  DFFACYLL SLSPR+KGH+YIGFTVNP+
Sbjct: 3   KRKGRSEISEETLNSEEKGDDFFACYLLASLSPRHKGHSYIGFTVNPR 50


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