BLASTX nr result

ID: Cnidium21_contig00025104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025104
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycin...   187   2e-45
ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-contain...   185   1e-44
ref|XP_002320386.1| methyl binding domain protein [Populus trich...   184   2e-44
ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   181   1e-43
gb|AFK39645.1| unknown [Lotus japonicus]                              181   2e-43

>ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
           gi|255641529|gb|ACU21038.1| unknown [Glycine max]
          Length = 177

 Score =  187 bits (476), Expect = 2e-45
 Identities = 83/147 (56%), Positives = 115/147 (78%)
 Frame = -2

Query: 743 MYAVQCGKCLKWRKILTQEEFEGIRANVTKDPFVCNKKLKVKCDDPADIEYDSSRTWVMD 564
           +YA QC  CLKWR+I TQEEFE IR+ VT++PF+C++K    CD+P DIEYDS+RTWV+D
Sbjct: 25  IYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPFLCSRKANSSCDEPGDIEYDSTRTWVID 84

Query: 563 KPDLPKTPQGFHRDVILRKDFSKLDAHYTSPEGKRLRSSVEVATFLEENPEYKKSISVAD 384
           KP+LPKTPQGF R ++LRKD+SKLDA+Y +P GK+LR+  E+A FL++NPE+ K +S +D
Sbjct: 85  KPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEF-KGVSASD 143

Query: 383 FSFITPKVVPETVPKDFVGKLRTEKKI 303
           F F +PK++ +T+P+    K    KK+
Sbjct: 144 FDFSSPKIMQDTIPEIIEQKDSANKKV 170


>ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           [Glycine max]
          Length = 193

 Score =  185 bits (469), Expect = 1e-44
 Identities = 82/147 (55%), Positives = 114/147 (77%)
 Frame = -2

Query: 743 MYAVQCGKCLKWRKILTQEEFEGIRANVTKDPFVCNKKLKVKCDDPADIEYDSSRTWVMD 564
           +YA QC  CLKWR+I TQEEFE IR+ V ++PF+C++K    CD+P DI+YDSSRTWV+D
Sbjct: 41  IYAAQCKNCLKWREIDTQEEFEEIRSKVAEEPFLCSRKANSSCDEPGDIKYDSSRTWVID 100

Query: 563 KPDLPKTPQGFHRDVILRKDFSKLDAHYTSPEGKRLRSSVEVATFLEENPEYKKSISVAD 384
           KP+LPKTPQGF R ++LRKD+SKLDA+Y +P GK+LR+  E+A FL++NPE+ K +S +D
Sbjct: 101 KPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEF-KGVSASD 159

Query: 383 FSFITPKVVPETVPKDFVGKLRTEKKI 303
           F F +PK++ +T+P+    K    KK+
Sbjct: 160 FDFSSPKIMQDTIPEVVEQKDSANKKV 186


>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  184 bits (468), Expect = 2e-44
 Identities = 81/152 (53%), Positives = 118/152 (77%)
 Frame = -2

Query: 776 KNGRLGACWSYMYAVQCGKCLKWRKILTQEEFEGIRANVTKDPFVCNKKLKVKCDDPADI 597
           KN R+       YA QC KCLKWR I T+EE+E IR+ + + PFVCN+K  V CDDPADI
Sbjct: 16  KNPRVAVRSIDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGVSCDDPADI 75

Query: 596 EYDSSRTWVMDKPDLPKTPQGFHRDVILRKDFSKLDAHYTSPEGKRLRSSVEVATFLEEN 417
           EY+++RTWV+D+P +PKTP+GF R ++LR+DFSK+DA+Y +P GK+LR+  E+A F++ N
Sbjct: 76  EYNATRTWVIDRPGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIDAN 135

Query: 416 PEYKKSISVADFSFITPKVVPETVPKDFVGKL 321
           P+Y K ++++DF+F +PKV+ +T+P+D V K+
Sbjct: 136 PKY-KDVNLSDFNFTSPKVMEDTIPEDAVRKV 166


>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  181 bits (460), Expect = 1e-43
 Identities = 80/135 (59%), Positives = 108/135 (80%)
 Frame = -2

Query: 740 YAVQCGKCLKWRKILTQEEFEGIRANVTKDPFVCNKKLKVKCDDPADIEYDSSRTWVMDK 561
           YA QC KC+KWR I T+EE+E IR+ + ++PF CN+K  + C+DPADIE D+SRTWV+DK
Sbjct: 7   YAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWVIDK 66

Query: 560 PDLPKTPQGFHRDVILRKDFSKLDAHYTSPEGKRLRSSVEVATFLEENPEYKKSISVADF 381
           P LPKTP GF R ++LR+DFSK+DA+Y +P GK+LR+  E+A FLE NP+Y K +S+ DF
Sbjct: 67  PGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKY-KGVSIEDF 125

Query: 380 SFITPKVVPETVPKD 336
           +F +PKV+ ETVP+D
Sbjct: 126 NFTSPKVMEETVPED 140


>gb|AFK39645.1| unknown [Lotus japonicus]
          Length = 176

 Score =  181 bits (459), Expect = 2e-43
 Identities = 83/145 (57%), Positives = 108/145 (74%)
 Frame = -2

Query: 743 MYAVQCGKCLKWRKILTQEEFEGIRANVTKDPFVCNKKLKVKCDDPADIEYDSSRTWVMD 564
           +YA QC KCLKWR + TQEEFE  R    ++PF C++K    CDDPADIEYDSSRTWV+D
Sbjct: 27  IYATQCIKCLKWRVVDTQEEFEEFRQKANEEPFDCSRKANCSCDDPADIEYDSSRTWVID 86

Query: 563 KPDLPKTPQGFHRDVILRKDFSKLDAHYTSPEGKRLRSSVEVATFLEENPEYKKSISVAD 384
           KP++PKTPQGF R ++LRKD+SKLDA+Y +P GK+LR+  E+A FL+E+PE+ + IS  D
Sbjct: 87  KPNVPKTPQGFRRSLVLRKDYSKLDAYYITPTGKKLRTRNEIAAFLKEHPEF-EGISAQD 145

Query: 383 FSFITPKVVPETVPKDFVGKLRTEK 309
           F F +PKV+ ET+P+    K    K
Sbjct: 146 FDFSSPKVMHETIPEGLEQKASASK 170


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