BLASTX nr result

ID: Cnidium21_contig00025086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025086
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     153   2e-35
ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-16
ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr...    89   7e-16
ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi...    89   7e-16
ref|XP_001754987.1| predicted protein [Physcomitrella patens sub...    89   7e-16

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  153 bits (387), Expect = 2e-35
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
 Frame = +3

Query: 3   ALGYALFDARGVNELPELTDFIIAEEYLNKD--PFTLIAFYPFSSPGEALLQMKAILNST 176
           A GYALF ARG+N++ ++  +  AEEY+N+   PF L A+ PFSS GEALLQM AI NS+
Sbjct: 75  ATGYALFLARGINDI-DMNKYQPAEEYINRSDTPFELKAYLPFSSLGEALLQMNAISNSS 133

Query: 177 VTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLRV 356
           VT+ L  F+  N           + L  +D +L   I +   ++  +  L   VMRGLR 
Sbjct: 134 VTEMLIKFIQKNFEPPFHR----HVLTTADPVLGEKIVNNVRLSDHSSLLTLSVMRGLRE 189

Query: 357 KIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAADKVVVVPHKFQG 536
           KI KLI GL+P +L KAQ  LA  Y+ Q      +     +  S    ++V+VVPH+F+G
Sbjct: 190 KIDKLI-GLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSFLQEQVMVVPHRFEG 248

Query: 537 LFIAKGLGKKDVICTRNLVPGKVLYGDKLISVQ 635
            F AK  GKK+++CTRNLVPG+ LYG+KLI VQ
Sbjct: 249 FFNAK--GKKNILCTRNLVPGEALYGEKLIHVQ 279


>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
 Frame = +3

Query: 9   GYALFDARGVNELPELTDFII-AEEYLNK--DPFTLIAFYPFSSPGEALLQMKAILNSTV 179
           GY+LF A G++E+ + T+ +  +   LN+      L AF+PF S  +AL Q+ ++    +
Sbjct: 12  GYSLFQANGIDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDALNQINSVSEGIM 71

Query: 180 TKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLRVK 359
           T EL++FL  NLPK   G+   + L V++  +  +IF+ T++   + D V  ++RG+R+ 
Sbjct: 72  TDELRNFLELNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKLPCQSNDFVHELLRGVRLH 131

Query: 360 IHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500
             + I  LKP DL KAQL L   Y R     K    + R+ + VI A
Sbjct: 132 FERFIKDLKPGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 174


>ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis
           sativus]
          Length = 552

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3   ALGYALFDARGVNELPELTDFIIAE-EYLNK--DPFTLIAFYPFSSPGEALLQMKAILNS 173
           A GYALF A G++E+ + T+ + +    LN+      L AF+PF S  +AL Q  ++   
Sbjct: 11  ASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNSVSEG 70

Query: 174 TVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLR 353
            +T EL+SFL  NLPK   G+   + L +++  +  NIF+ T+I   + + V  ++RG+R
Sbjct: 71  LMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELLRGVR 130

Query: 354 VKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500
           +   K I  LK  DL KAQL L   Y R     K    + R+ + VI A
Sbjct: 131 LHFDKFIKDLKQGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 175


>ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus]
          Length = 552

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3   ALGYALFDARGVNELPELTDFIIAE-EYLNK--DPFTLIAFYPFSSPGEALLQMKAILNS 173
           A GYALF A G++E+ + T+ + +    LN+      L AF+PF S  +AL Q  ++   
Sbjct: 11  ASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNSVSEG 70

Query: 174 TVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLR 353
            +T EL+SFL  NLPK   G+   + L +++  +  NIF+ T+I   + + V  ++RG+R
Sbjct: 71  LMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELLRGVR 130

Query: 354 VKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500
           +   K I  LK  DL KAQL L   Y R     K    + R+ + VI A
Sbjct: 131 LHFDKFIKDLKQGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 175


>ref|XP_001754987.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694091|gb|EDQ80441.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 590

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
 Frame = +3

Query: 3   ALGYALFDARGVNELPELTDFIIAEEYLNKDPF----TLIAFYPFSSPGEALLQMKAILN 170
           A GYALF+  G++E+ +  +  I E  ++ + F     L+AF PF+S  +AL Q  A+  
Sbjct: 10  ASGYALFETMGLDEIGQNAE-AIQESIMDLNRFGKVVKLLAFSPFTSAADALEQCNAVTE 68

Query: 171 STVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGL 350
             +T ELK+FL  NLPK   G+     L V++  L   I +AT I   + D V+  +RG+
Sbjct: 69  GIMTAELKNFLELNLPKAKAGKKAKVSLGVAEPKLGSAILEATSIPCQSNDYVNEFLRGV 128

Query: 351 RVKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAAD 503
           R    + I  LK  D+ KAQL LA  Y R       + +   I  S+   D
Sbjct: 129 RFHFSRFIKDLKEGDIEKAQLGLAHSYSRSKVKFNVNRVDNMIIQSISLLD 179


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