BLASTX nr result
ID: Cnidium21_contig00025086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00025086 (657 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] 153 2e-35 ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2... 90 4e-16 ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar pr... 89 7e-16 ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumi... 89 7e-16 ref|XP_001754987.1| predicted protein [Physcomitrella patens sub... 89 7e-16 >dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] Length = 475 Score = 153 bits (387), Expect = 2e-35 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Frame = +3 Query: 3 ALGYALFDARGVNELPELTDFIIAEEYLNKD--PFTLIAFYPFSSPGEALLQMKAILNST 176 A GYALF ARG+N++ ++ + AEEY+N+ PF L A+ PFSS GEALLQM AI NS+ Sbjct: 75 ATGYALFLARGINDI-DMNKYQPAEEYINRSDTPFELKAYLPFSSLGEALLQMNAISNSS 133 Query: 177 VTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLRV 356 VT+ L F+ N + L +D +L I + ++ + L VMRGLR Sbjct: 134 VTEMLIKFIQKNFEPPFHR----HVLTTADPVLGEKIVNNVRLSDHSSLLTLSVMRGLRE 189 Query: 357 KIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAADKVVVVPHKFQG 536 KI KLI GL+P +L KAQ LA Y+ Q + + S ++V+VVPH+F+G Sbjct: 190 KIDKLI-GLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSFLQEQVMVVPHRFEG 248 Query: 537 LFIAKGLGKKDVICTRNLVPGKVLYGDKLISVQ 635 F AK GKK+++CTRNLVPG+ LYG+KLI VQ Sbjct: 249 FFNAK--GKKNILCTRNLVPGEALYGEKLIHVQ 279 >ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1| predicted protein [Populus trichocarpa] Length = 500 Score = 89.7 bits (221), Expect = 4e-16 Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 3/167 (1%) Frame = +3 Query: 9 GYALFDARGVNELPELTDFII-AEEYLNK--DPFTLIAFYPFSSPGEALLQMKAILNSTV 179 GY+LF A G++E+ + T+ + + LN+ L AF+PF S +AL Q+ ++ + Sbjct: 12 GYSLFQANGIDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDALNQINSVSEGIM 71 Query: 180 TKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLRVK 359 T EL++FL NLPK G+ + L V++ + +IF+ T++ + D V ++RG+R+ Sbjct: 72 TDELRNFLELNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKLPCQSNDFVHELLRGVRLH 131 Query: 360 IHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500 + I LKP DL KAQL L Y R K + R+ + VI A Sbjct: 132 FERFIKDLKPGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 174 >ref|XP_004165830.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 56-like [Cucumis sativus] Length = 552 Score = 89.0 bits (219), Expect = 7e-16 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 3/169 (1%) Frame = +3 Query: 3 ALGYALFDARGVNELPELTDFIIAE-EYLNK--DPFTLIAFYPFSSPGEALLQMKAILNS 173 A GYALF A G++E+ + T+ + + LN+ L AF+PF S +AL Q ++ Sbjct: 11 ASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNSVSEG 70 Query: 174 TVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLR 353 +T EL+SFL NLPK G+ + L +++ + NIF+ T+I + + V ++RG+R Sbjct: 71 LMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELLRGVR 130 Query: 354 VKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500 + K I LK DL KAQL L Y R K + R+ + VI A Sbjct: 131 LHFDKFIKDLKQGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 175 >ref|XP_004138057.1| PREDICTED: nucleolar protein 56-like [Cucumis sativus] Length = 552 Score = 89.0 bits (219), Expect = 7e-16 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 3/169 (1%) Frame = +3 Query: 3 ALGYALFDARGVNELPELTDFIIAE-EYLNK--DPFTLIAFYPFSSPGEALLQMKAILNS 173 A GYALF A G++E+ + T+ + + LN+ L AF+PF S +AL Q ++ Sbjct: 11 ASGYALFHAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALKQCNSVSEG 70 Query: 174 TVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGLR 353 +T EL+SFL NLPK G+ + L +++ + NIF+ T+I + + V ++RG+R Sbjct: 71 LMTDELRSFLEINLPKAKEGKKAKFVLGLAEPKIGSNIFEETKIPCQSNEFVLELLRGVR 130 Query: 354 VKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAA 500 + K I LK DL KAQL L Y R K + R+ + VI A Sbjct: 131 LHFDKFIKDLKQGDLEKAQLGLGHSYSR----AKVKFNVNRVDNMVIQA 175 >ref|XP_001754987.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694091|gb|EDQ80441.1| predicted protein [Physcomitrella patens subsp. patens] Length = 590 Score = 89.0 bits (219), Expect = 7e-16 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 4/171 (2%) Frame = +3 Query: 3 ALGYALFDARGVNELPELTDFIIAEEYLNKDPF----TLIAFYPFSSPGEALLQMKAILN 170 A GYALF+ G++E+ + + I E ++ + F L+AF PF+S +AL Q A+ Sbjct: 10 ASGYALFETMGLDEIGQNAE-AIQESIMDLNRFGKVVKLLAFSPFTSAADALEQCNAVTE 68 Query: 171 STVTKELKSFLVNNLPKRIPGRNLGYQLAVSDGLLAHNIFDATEINAITGDLVSHVMRGL 350 +T ELK+FL NLPK G+ L V++ L I +AT I + D V+ +RG+ Sbjct: 69 GIMTAELKNFLELNLPKAKAGKKAKVSLGVAEPKLGSAILEATSIPCQSNDYVNEFLRGV 128 Query: 351 RVKIHKLIIGLKPRDLIKAQLNLARCYRRQSSACKQSSMLQRIYHSVIAAD 503 R + I LK D+ KAQL LA Y R + + I S+ D Sbjct: 129 RFHFSRFIKDLKEGDIEKAQLGLAHSYSRSKVKFNVNRVDNMIIQSISLLD 179