BLASTX nr result

ID: Cnidium21_contig00025084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025084
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620...   101   9e-44
ref|XP_002519809.1| nuclear pore complex protein nup93, putative...   103   6e-43
ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620...   100   1e-42
ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-42
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-41

>ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera]
           gi|297739625|emb|CBI29807.3| unnamed protein product
           [Vitis vinifera]
          Length = 863

 Score =  101 bits (251), Expect(2) = 9e-44
 Identities = 45/57 (78%), Positives = 54/57 (94%)
 Frame = +2

Query: 2   YESLNLDTSGGKSVSMQKIWHLIQTMLGEDSNSQQNVSRKMSLIIGARRHLEWGHEK 172
           Y+SL L+TSGGKSV+MQKIWHLIQT++GED+ +Q NVS+KMSL+IGARRHLEWGHEK
Sbjct: 236 YDSLGLETSGGKSVNMQKIWHLIQTLMGEDTAAQWNVSKKMSLVIGARRHLEWGHEK 292



 Score =  100 bits (250), Expect(2) = 9e-44
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +1

Query: 169 ETIQSHPAQAALGGAVGKMQRIRAFLRILLRDYGVLDLDAGDSRRQPPVDTTWQQ 333
           +TIQSHPAQAALGG VG +QRI AFLRI LRDYGVLD DAGD+RRQPPVDTTWQQ
Sbjct: 296 DTIQSHPAQAALGGVVGNLQRIHAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQ 350


>ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis]
           gi|223541048|gb|EEF42605.1| nuclear pore complex protein
           nup93, putative [Ricinus communis]
          Length = 710

 Score =  103 bits (258), Expect(2) = 6e-43
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = +1

Query: 169 ETIQSHPAQAALGGAVGKMQRIRAFLRILLRDYGVLDLDAGDSRRQPPVDTTWQQ 333
           +TIQSHPAQAALGGAVG +QR+RAFLRI LRDYGVLD DAGD+RRQPPVDTTWQQ
Sbjct: 265 DTIQSHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQ 319



 Score = 95.5 bits (236), Expect(2) = 6e-43
 Identities = 42/57 (73%), Positives = 52/57 (91%)
 Frame = +2

Query: 2   YESLNLDTSGGKSVSMQKIWHLIQTMLGEDSNSQQNVSRKMSLIIGARRHLEWGHEK 172
           Y+SL  + SGGKSV+MQK+WHLIQT++GE+S  Q+N+SRKMSL+IGARRHLEWGHEK
Sbjct: 205 YDSLGHEASGGKSVNMQKMWHLIQTLMGENSTFQRNLSRKMSLVIGARRHLEWGHEK 261


>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
           gi|449494745|ref|XP_004159635.1| PREDICTED:
           uncharacterized protein At2g41620-like [Cucumis sativus]
          Length = 863

 Score =  100 bits (249), Expect(2) = 1e-42
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +1

Query: 169 ETIQSHPAQAALGGAVGKMQRIRAFLRILLRDYGVLDLDAGDSRRQPPVDTTWQQ 333
           +TIQSHPAQAALGG VG +QRIRAFLRI LRDYGVLD DA D+RRQPPVDTTWQQ
Sbjct: 296 DTIQSHPAQAALGGVVGNLQRIRAFLRIRLRDYGVLDFDANDARRQPPVDTTWQQ 350



 Score = 97.8 bits (242), Expect(2) = 1e-42
 Identities = 43/57 (75%), Positives = 53/57 (92%)
 Frame = +2

Query: 2   YESLNLDTSGGKSVSMQKIWHLIQTMLGEDSNSQQNVSRKMSLIIGARRHLEWGHEK 172
           YESL+L  S GKSV+MQKIWHLIQT++GE+S S++N+S+KMSLI+GARRHLEWGHEK
Sbjct: 236 YESLDLHASAGKSVNMQKIWHLIQTLMGEESTSKRNISKKMSLILGARRHLEWGHEK 292


>ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1|
           predicted protein [Populus trichocarpa]
          Length = 863

 Score =  100 bits (250), Expect(2) = 4e-42
 Identities = 46/55 (83%), Positives = 51/55 (92%)
 Frame = +1

Query: 169 ETIQSHPAQAALGGAVGKMQRIRAFLRILLRDYGVLDLDAGDSRRQPPVDTTWQQ 333
           +TIQ+HPAQAALGGAVG +QR+RAFLRI LRDYGVLD DAGD+ RQPPVDTTWQQ
Sbjct: 296 DTIQNHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQ 350



 Score = 95.9 bits (237), Expect(2) = 4e-42
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = +2

Query: 2   YESLNLDTSGGKSVSMQKIWHLIQTMLGEDSNSQQNVSRKMSLIIGARRHLEWGHEK 172
           YESL  + SGGKSV+MQKIWHL+QT++GE++  +Q++SRKMSL+IGARRHLEWGHEK
Sbjct: 236 YESLGAEVSGGKSVNMQKIWHLVQTLVGENTTMKQSISRKMSLVIGARRHLEWGHEK 292


>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
           predicted protein [Populus trichocarpa]
          Length = 863

 Score = 99.0 bits (245), Expect(2) = 3e-41
 Identities = 45/55 (81%), Positives = 50/55 (90%)
 Frame = +1

Query: 169 ETIQSHPAQAALGGAVGKMQRIRAFLRILLRDYGVLDLDAGDSRRQPPVDTTWQQ 333
           +TIQ+HPAQAALGGAVG +QR+ AFLRI LRDYGVLD DAGD+ RQPPVDTTWQQ
Sbjct: 296 DTIQNHPAQAALGGAVGNLQRVHAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQ 350



 Score = 94.7 bits (234), Expect(2) = 3e-41
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = +2

Query: 2   YESLNLDTSGGKSVSMQKIWHLIQTMLGEDSNSQQNVSRKMSLIIGARRHLEWGHEK 172
           YESL ++ SGGKSV+MQKIWHL+QT++GE++  Q  VSRKMSL+IGARRHLEWGHEK
Sbjct: 236 YESLGVEVSGGKSVNMQKIWHLVQTLVGENTTMQPIVSRKMSLVIGARRHLEWGHEK 292


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