BLASTX nr result

ID: Cnidium21_contig00025044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025044
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181316.1| cysteine/histidine-rich C1 domain-containing pr...    42   2e-06
ref|XP_003633597.1| PREDICTED: uncharacterized protein LOC100853...    45   5e-06
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    47   6e-06
ref|XP_002522096.1| protein binding protein, putative [Ricinus c...    45   6e-06

>ref|NP_181316.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|330254358|gb|AEC09452.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -2

Query: 159 TKCQFWMHKTCADAPTTFQFQFHHQHPLVLSFSLPRLYHKFKQHCRLCKET 7
           T+C + +H  CA  P+T     H QH L L F  P   H+ K+ C +C E+
Sbjct: 180 TRCDYNLHDHCATCPSTLATFMHPQHELRLVFRGPEHTHQNKRMCDICDES 230



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 349 IEHPAHSQHPLTLIQRPSSFKCDACKVDDNNRDSSYKCTKCQF 221
           ++H  H  HPLT +     F CD CK     +  +Y+CT+C +
Sbjct: 145 VQHFTHI-HPLTKVDGYGEFTCDGCKTYGFGK--TYRCTRCDY 184


>ref|XP_003633597.1| PREDICTED: uncharacterized protein LOC100853056 [Vitis vinifera]
          Length = 226

 Score = 44.7 bits (104), Expect(2) = 5e-06
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
 Frame = -1

Query: 478 CNACFRPLPWDVIQFLYFSSDTDIYVCVKCALFHLQQPLEDPK-IEHPAHSQHPLTLIQR 302
           C AC R +           ++   Y C+ C  +   + L  P+ I+HP+H  H LTL+  
Sbjct: 25  CKACDRLI-----------AEQTFYGCIACKYYLHDRCLNLPRWIKHPSHPSHSLTLLPA 73

Query: 301 PS----SFKCDACKVDDNNRDSSYKCTKCQF 221
           P+    SF C+AC    N+   S  C +C+F
Sbjct: 74  PTYPSGSFSCNACGSAANSFSKS--CAECEF 102



 Score = 30.4 bits (67), Expect(2) = 5e-06
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 156 KCQFWMHKTCADAPTTFQFQFHHQHPLVLSFSLPRLYHKFKQHCRLC 16
           +C+F +H  C+  P+T      H H L L+F  P    K+  +C  C
Sbjct: 99  ECEFDLHLHCSSLPSTVLLD-AHPHELKLTFESPYDDEKWVYYCAEC 144


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
 Frame = -1

Query: 502 SKSLPVYRCNAC-FRPLPWDVIQFLYFSSDTDIYVCVKCAL-FHLQQPLEDPKIEHPAHS 329
           ++SL +  C+AC  +P  W             +Y C  C    H+        I HP H 
Sbjct: 24  AQSLYMNSCSACNLQPSGW-------------MYSCKPCNFTLHISCTQMPTLITHPCHP 70

Query: 328 QHPLTLIQRP----SSFKCDACKVDDNNRDSSYKCTKCQF 221
            HPLTL   P     SF CD C +  N    +Y CT C F
Sbjct: 71  IHPLTLFSTPVYPGGSFNCDGCGLQGNG--FNYHCTTCDF 108



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -2

Query: 159 TKCQFWMHKTCADAPTTFQFQFHHQHPLVLSFSLPRLYHKFKQHCRLC 16
           T C F +H  CA  P +   Q  H H L L+F  P  Y      C +C
Sbjct: 104 TTCDFDVHMMCATNPLSLAHQ-SHPHQLNLAFYPP--YQTKGFSCDIC 148


>ref|XP_002522096.1| protein binding protein, putative [Ricinus communis]
           gi|223538695|gb|EEF40296.1| protein binding protein,
           putative [Ricinus communis]
          Length = 240

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
 Frame = -1

Query: 400 CVKCALFHLQQPLEDPK-IEHPAHSQHPLTLIQRPS----SFKCDACKVDDNNRDSSYKC 236
           C+ C  F   Q L  P+ ++HP+H  H LTL+  P+    S+ C+AC +   +   S+ C
Sbjct: 43  CLSCKHFLHDQCLNLPRWLQHPSHHSHTLTLLPAPTYPCGSYSCNACGIPGGS-SFSFSC 101

Query: 235 TKCQF 221
            +C+F
Sbjct: 102 AQCEF 106



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -2

Query: 156 KCQFWMHKTCADAPTTFQFQFHHQHPLVLSFSLPRLYHKFKQHCRLCKETLN 1
           +C+F +H  CA  P+T      H H L L+F            C +C E +N
Sbjct: 103 QCEFDLHTNCATLPSTVLID-AHSHELTLTFDNFPSDGNISIVCDVCNELVN 153


Top