BLASTX nr result

ID: Cnidium21_contig00025001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025001
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20795.3| unnamed protein product [Vitis vinifera]              424   e-116
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   424   e-116
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...   421   e-115
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...   414   e-113
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   409   e-112

>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  424 bits (1090), Expect = e-116
 Identities = 207/272 (76%), Positives = 240/272 (88%), Gaps = 1/272 (0%)
 Frame = +1

Query: 1    LLAEPMPSLDAIAIHVNMSSGVLPPLTPLQKQESSPGQNGDIRSPKRVCTENRSVLVERN 180
            LLAEPMPSLDAI++H+N S G LPP+  LQK+ESSPGQNGDIRSPKRVC + RSVLVERN
Sbjct: 619  LLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSPGQNGDIRSPKRVCPDYRSVLVERN 678

Query: 181  SFTSPVKDRLLATNNLKSRSLPPALQSAFSSPTRPNPGGGGETCAETTINVFFGKIVKLA 360
            SFTSPVKDR LA NNLKS+  PP LQSAF+SPTRPNPG  GETCAET IN+FF KI+KLA
Sbjct: 679  SFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAETGINIFFSKIIKLA 738

Query: 361  AVRINGMIDRLQLSQQIKENVYCLFQKILLQQSALFFSRHIDQIILSCLYGVAKISQLNL 540
            AVRINGM++RLQLSQQ++ENVYCLFQ+IL ++++LFF+RHIDQIIL C YG+AKISQ+NL
Sbjct: 739  AVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLAKISQMNL 798

Query: 541  TFKEIIFNYRKQPQCKPQVFRSVFVDWSAAHRNGKTGKDHVDIITFYNEIFIPAVKPLLM 720
            TF+EII NYRKQPQCKPQ+FRSVFVDWS+A RNGKTGK+HVDIITFYNEIFIPAVKPLLM
Sbjct: 799  TFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFYNEIFIPAVKPLLM 858

Query: 721  ELAP-AGIVKKSNQISEAINNSDKGQCPGSPK 813
            E+ P  G   K+N++ E +NN++  QCP SPK
Sbjct: 859  EIGPGGGTTTKTNRVPE-VNNNNDAQCPESPK 889


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
            gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
            Full=Retinoblastoma-related protein
            gi|359392418|gb|AEV45768.1| RBR protein [Vitis
            pseudoreticulata]
          Length = 1007

 Score =  424 bits (1090), Expect = e-116
 Identities = 207/272 (76%), Positives = 240/272 (88%), Gaps = 1/272 (0%)
 Frame = +1

Query: 1    LLAEPMPSLDAIAIHVNMSSGVLPPLTPLQKQESSPGQNGDIRSPKRVCTENRSVLVERN 180
            LLAEPMPSLDAI++H+N S G LPP+  LQK+ESSPGQNGDIRSPKRVC + RSVLVERN
Sbjct: 620  LLAEPMPSLDAISMHINASCGGLPPVPSLQKRESSPGQNGDIRSPKRVCPDYRSVLVERN 679

Query: 181  SFTSPVKDRLLATNNLKSRSLPPALQSAFSSPTRPNPGGGGETCAETTINVFFGKIVKLA 360
            SFTSPVKDR LA NNLKS+  PP LQSAF+SPTRPNPG  GETCAET IN+FF KI+KLA
Sbjct: 680  SFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRPNPGREGETCAETGINIFFSKIIKLA 739

Query: 361  AVRINGMIDRLQLSQQIKENVYCLFQKILLQQSALFFSRHIDQIILSCLYGVAKISQLNL 540
            AVRINGM++RLQLSQQ++ENVYCLFQ+IL ++++LFF+RHIDQIIL C YG+AKISQ+NL
Sbjct: 740  AVRINGMVERLQLSQQMRENVYCLFQQILNRRTSLFFNRHIDQIILCCFYGLAKISQMNL 799

Query: 541  TFKEIIFNYRKQPQCKPQVFRSVFVDWSAAHRNGKTGKDHVDIITFYNEIFIPAVKPLLM 720
            TF+EII NYRKQPQCKPQ+FRSVFVDWS+A RNGKTGK+HVDIITFYNEIFIPAVKPLLM
Sbjct: 800  TFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGKTGKEHVDIITFYNEIFIPAVKPLLM 859

Query: 721  ELAP-AGIVKKSNQISEAINNSDKGQCPGSPK 813
            E+ P  G   K+N++ E +NN++  QCP SPK
Sbjct: 860  EIGPGGGTTTKTNRVPE-VNNNNDAQCPESPK 890


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
            gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
            Full=Retinoblastoma-related protein
            gi|223530511|gb|EEF32393.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1020

 Score =  421 bits (1082), Expect = e-115
 Identities = 209/272 (76%), Positives = 236/272 (86%), Gaps = 1/272 (0%)
 Frame = +1

Query: 1    LLAEPMPSLDAIAIHVNMSSGVLPPLTPLQKQESSPGQNGDIRSPKRVCTENRSVLVERN 180
            LLAEPMPSLDAIA+H+N SSG LPPL+ + K E SPGQNGDIRSPKR CT+ RSVLVERN
Sbjct: 632  LLAEPMPSLDAIAVHINFSSGGLPPLSSVSKHEISPGQNGDIRSPKRPCTDYRSVLVERN 691

Query: 181  SFTSPVKDRLLATNNLKSRSLPPALQSAFSSPTRPNPGGGGETCAETTINVFFGKIVKLA 360
            SFTSPVKDRLLA  NLKS+  PP LQSAF+SPTRPNPGGGGETCAET IN+FF KI KLA
Sbjct: 692  SFTSPVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKINKLA 751

Query: 361  AVRINGMIDRLQLSQQ-IKENVYCLFQKILLQQSALFFSRHIDQIILSCLYGVAKISQLN 537
            AVRINGM++RLQ SQQ I+ENVY LFQ++L QQ++LFF+RHIDQIIL C YGVAKIS++N
Sbjct: 752  AVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQIILCCFYGVAKISKVN 811

Query: 538  LTFKEIIFNYRKQPQCKPQVFRSVFVDWSAAHRNGKTGKDHVDIITFYNEIFIPAVKPLL 717
            LTF+EII+NYRKQPQCKPQVFRSVFVDWS+A  NG+TG+DHVDIITFYNEIFIPA KPLL
Sbjct: 812  LTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHNGRTGQDHVDIITFYNEIFIPAAKPLL 871

Query: 718  MELAPAGIVKKSNQISEAINNSDKGQCPGSPK 813
            +E+  AGI  K +Q+ E  NN D GQCP SPK
Sbjct: 872  VEVGSAGITVKGSQVPEVNNNKD-GQCPASPK 902


>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
            gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
            baicalensis]
          Length = 1006

 Score =  414 bits (1064), Expect = e-113
 Identities = 206/271 (76%), Positives = 233/271 (85%)
 Frame = +1

Query: 1    LLAEPMPSLDAIAIHVNMSSGVLPPLTPLQKQESSPGQNGDIRSPKRVCTENRSVLVERN 180
            LLAEPMPSLDAIA+H NMS GVLPP+  L K E   GQNGDIRSPKRVCTE RSVLVERN
Sbjct: 620  LLAEPMPSLDAIAMHNNMSCGVLPPMQALLKHEKH-GQNGDIRSPKRVCTEYRSVLVERN 678

Query: 181  SFTSPVKDRLLATNNLKSRSLPPALQSAFSSPTRPNPGGGGETCAETTINVFFGKIVKLA 360
            SFTSPVKDRLLA NNLKS+  PP L SAF+SPTRP+PGGGGETCAET +NVFF KIVKLA
Sbjct: 679  SFTSPVKDRLLALNNLKSKFPPPILHSAFASPTRPSPGGGGETCAETAVNVFFSKIVKLA 738

Query: 361  AVRINGMIDRLQLSQQIKENVYCLFQKILLQQSALFFSRHIDQIILSCLYGVAKISQLNL 540
            AVRINGM++RLQLSQQI+E+VYCLFQKIL Q++ LFF+RHIDQI+L C YGV+KISQL L
Sbjct: 739  AVRINGMVERLQLSQQIRESVYCLFQKILSQRTTLFFNRHIDQILLCCFYGVSKISQLTL 798

Query: 541  TFKEIIFNYRKQPQCKPQVFRSVFVDWSAAHRNGKTGKDHVDIITFYNEIFIPAVKPLLM 720
            TFKEIIFNYRKQPQCKPQVFR+V+VDW A  R GK+G DHVDIITFYNEIF+PAVKPLL+
Sbjct: 799  TFKEIIFNYRKQPQCKPQVFRNVYVDWKALRRTGKSGPDHVDIITFYNEIFVPAVKPLLV 858

Query: 721  ELAPAGIVKKSNQISEAINNSDKGQCPGSPK 813
            E+AP G  +  +Q+ EA NN++ G  P SP+
Sbjct: 859  EIAPGGSAQSGSQVPEAKNNTN-GVNPSSPR 888


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  409 bits (1051), Expect = e-112
 Identities = 199/272 (73%), Positives = 238/272 (87%), Gaps = 1/272 (0%)
 Frame = +1

Query: 1    LLAEPMPSLDAIAIHVNMSSGVLPPLTP-LQKQESSPGQNGDIRSPKRVCTENRSVLVER 177
            LLAEPMPSLDAIA+ +N S G+    TP LQK ES PGQNGDIRSPKR+CT+ RSVLVER
Sbjct: 738  LLAEPMPSLDAIAVQINFS-GIGVSATPNLQKHESLPGQNGDIRSPKRLCTDLRSVLVER 796

Query: 178  NSFTSPVKDRLLATNNLKSRSLPPALQSAFSSPTRPNPGGGGETCAETTINVFFGKIVKL 357
            NSFTSPVKDRL+A +++KS+ LPP LQSAF+SPTRPNPGGGGETCAET IN+FF KI KL
Sbjct: 797  NSFTSPVKDRLMAFSSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKITKL 856

Query: 358  AAVRINGMIDRLQLSQQIKENVYCLFQKILLQQSALFFSRHIDQIILSCLYGVAKISQLN 537
            AAVR+NGM++RLQLS QI+ENVYCLFQ+IL Q++++ F+RHIDQIIL C YGVAKISQL+
Sbjct: 857  AAVRVNGMVERLQLSHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAKISQLS 916

Query: 538  LTFKEIIFNYRKQPQCKPQVFRSVFVDWSAAHRNGKTGKDHVDIITFYNEIFIPAVKPLL 717
            LTF+EII+NYRKQPQCKPQVFR+VFVDWS+A RNG++G+DHVDIITFYNEIFIP+VKPLL
Sbjct: 917  LTFREIIYNYRKQPQCKPQVFRNVFVDWSSARRNGRSGQDHVDIITFYNEIFIPSVKPLL 976

Query: 718  MELAPAGIVKKSNQISEAINNSDKGQCPGSPK 813
            +E+ PAG   K++++ + +NN     CPGSPK
Sbjct: 977  VEIGPAGSTMKTDRVPQ-VNNDSDAPCPGSPK 1007


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