BLASTX nr result

ID: Cnidium21_contig00024483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024483
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518598.1| PREDICTED: tubby-like F-box protein 8-like [...   125   4e-27
gb|ACR36164.1| unknown [Zea mays] gi|413916228|gb|AFW56160.1| tu...   125   4e-27
ref|XP_004163912.1| PREDICTED: tubby-like F-box protein 8-like [...   125   5e-27
ref|XP_004140690.1| PREDICTED: tubby-like F-box protein 8-like [...   125   5e-27
gb|AFK44234.1| unknown [Medicago truncatula]                          125   5e-27

>ref|XP_003518598.1| PREDICTED: tubby-like F-box protein 8-like [Glycine max]
          Length = 424

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/85 (71%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMD 182
           WCLNFRGRVTVASVKNFQLI                    +HDK+ILQFGKVGKD+FTMD
Sbjct: 340 WCLNFRGRVTVASVKNFQLIAATQPPAAGAPTPSSQPAQSDHDKIILQFGKVGKDIFTMD 399

Query: 183 YRYPLSAFQAFAICLSSFDTKLACE 257
           YRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 400 YRYPLSAFQAFAICLTSFDTKLACE 424


>gb|ACR36164.1| unknown [Zea mays] gi|413916228|gb|AFW56160.1| tubby-like protein
           isoform 1 [Zea mays] gi|413916229|gb|AFW56161.1|
           tubby-like protein isoform 2 [Zea mays]
          Length = 436

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/85 (72%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMD 182
           WCLNFRGRVTVASVKNFQL+                    EH+KVILQFGKV KDMFTMD
Sbjct: 352 WCLNFRGRVTVASVKNFQLVAATQPAAGAPTPSQATPVPPEHEKVILQFGKVAKDMFTMD 411

Query: 183 YRYPLSAFQAFAICLSSFDTKLACE 257
           YRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 412 YRYPLSAFQAFAICLSSFDTKLACE 436


>ref|XP_004163912.1| PREDICTED: tubby-like F-box protein 8-like [Cucumis sativus]
          Length = 428

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/85 (75%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMD 182
           WCLNFRGRVTVASVKNFQLI                    EHDK+ILQFGKVGKDMFTMD
Sbjct: 346 WCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPGPP--EHDKIILQFGKVGKDMFTMD 403

Query: 183 YRYPLSAFQAFAICLSSFDTKLACE 257
           YRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 404 YRYPLSAFQAFAICLSSFDTKLACE 428


>ref|XP_004140690.1| PREDICTED: tubby-like F-box protein 8-like [Cucumis sativus]
          Length = 428

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/85 (75%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMD 182
           WCLNFRGRVTVASVKNFQLI                    EHDK+ILQFGKVGKDMFTMD
Sbjct: 346 WCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPGPP--EHDKIILQFGKVGKDMFTMD 403

Query: 183 YRYPLSAFQAFAICLSSFDTKLACE 257
           YRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 404 YRYPLSAFQAFAICLSSFDTKLACE 428


>gb|AFK44234.1| unknown [Medicago truncatula]
          Length = 366

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/85 (75%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMD 182
           WCLNFRGRVTVASVKNFQLI                    EHDK+ILQFGKVGKDMFTMD
Sbjct: 284 WCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPP--EHDKIILQFGKVGKDMFTMD 341

Query: 183 YRYPLSAFQAFAICLSSFDTKLACE 257
           YRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 342 YRYPLSAFQAFAICLSSFDTKLACE 366


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