BLASTX nr result

ID: Cnidium21_contig00024482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024482
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001772602.1| predicted protein [Physcomitrella patens sub...   127   9e-28
ref|XP_004163912.1| PREDICTED: tubby-like F-box protein 8-like [...   125   4e-27
ref|XP_004140690.1| PREDICTED: tubby-like F-box protein 8-like [...   125   4e-27
gb|AFK44234.1| unknown [Medicago truncatula]                          125   4e-27
ref|XP_003547576.1| PREDICTED: tubby-like F-box protein 8-like [...   125   4e-27

>ref|XP_001772602.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676157|gb|EDQ62644.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 428

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/84 (72%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMDY 182
           WCLNFRGRVTVASVKNFQL+                   +HDKV+LQFGK+GKDMFTMDY
Sbjct: 345 WCLNFRGRVTVASVKNFQLVAATSVKAVSAAATTSSSSADHDKVLLQFGKIGKDMFTMDY 404

Query: 183 RYPLSAFQAFAICLSSFDTKLACE 254
           RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 405 RYPLSAFQAFAICLSSFDTKLACE 428


>ref|XP_004163912.1| PREDICTED: tubby-like F-box protein 8-like [Cucumis sativus]
          Length = 428

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/84 (76%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMDY 182
           WCLNFRGRVTVASVKNFQLI                   EHDK+ILQFGKVGKDMFTMDY
Sbjct: 346 WCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPGPP-EHDKIILQFGKVGKDMFTMDY 404

Query: 183 RYPLSAFQAFAICLSSFDTKLACE 254
           RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 405 RYPLSAFQAFAICLSSFDTKLACE 428


>ref|XP_004140690.1| PREDICTED: tubby-like F-box protein 8-like [Cucumis sativus]
          Length = 428

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/84 (76%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMDY 182
           WCLNFRGRVTVASVKNFQLI                   EHDK+ILQFGKVGKDMFTMDY
Sbjct: 346 WCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPGPP-EHDKIILQFGKVGKDMFTMDY 404

Query: 183 RYPLSAFQAFAICLSSFDTKLACE 254
           RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 405 RYPLSAFQAFAICLSSFDTKLACE 428


>gb|AFK44234.1| unknown [Medicago truncatula]
          Length = 366

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/84 (76%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMDY 182
           WCLNFRGRVTVASVKNFQLI                   EHDK+ILQFGKVGKDMFTMDY
Sbjct: 284 WCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPP-EHDKIILQFGKVGKDMFTMDY 342

Query: 183 RYPLSAFQAFAICLSSFDTKLACE 254
           RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 343 RYPLSAFQAFAICLSSFDTKLACE 366


>ref|XP_003547576.1| PREDICTED: tubby-like F-box protein 8-like [Glycine max]
          Length = 410

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/84 (76%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   WCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVGKDMFTMDY 182
           WCLNFRGRVTVASVKNFQLI                   EHDK+ILQFGKVGKDMFTMDY
Sbjct: 328 WCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPAPP-EHDKIILQFGKVGKDMFTMDY 386

Query: 183 RYPLSAFQAFAICLSSFDTKLACE 254
           RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 387 RYPLSAFQAFAICLSSFDTKLACE 410


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