BLASTX nr result

ID: Cnidium21_contig00024479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024479
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29535.3| unnamed protein product [Vitis vinifera]              130   1e-28
emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]   119   4e-25
ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_003547150.1| PREDICTED: protein SMG7-like [Glycine max]        110   1e-22
ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22

>emb|CBI29535.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/115 (54%), Positives = 82/115 (71%)
 Frame = +1

Query: 202 MNTHALAVDEDDREKENNFLEVVNAEKKLWTSIHSKGLLRKDVQELYHKARAGYEDMIIN 381
           M T +L   +D + K++ F EVVN EK+LW  IHSKGLL  + Q+LY K R+ Y  +I+N
Sbjct: 1   MGTDSLIPLKDQKGKQSFFAEVVNTEKQLWALIHSKGLLHSETQDLYQKVRSSYVKVILN 60

Query: 382 DPEGMELQDVEYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVASVQNNID 546
           + E  + QD+EY LWKLHYKHIDEFRKRIRQSS + E+KK    Q+VA+ QN+ D
Sbjct: 61  EQETEQPQDIEYSLWKLHYKHIDEFRKRIRQSSANGESKKSTMPQNVANTQNSND 115


>emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]
          Length = 931

 Score =  119 bits (297), Expect = 4e-25
 Identities = 56/95 (58%), Positives = 70/95 (73%)
 Frame = +1

Query: 262 EVVNAEKKLWTSIHSKGLLRKDVQELYHKARAGYEDMIINDPEGMELQDVEYCLWKLHYK 441
           +VVN EK+LW  IHSKGLL  + Q LY K R+ Y  +I+N+ E  + QD+EY LWKLHYK
Sbjct: 57  QVVNTEKQLWALIHSKGLLHSETQXLYQKVRSSYVKIILNEQETEQPQDIEYSLWKLHYK 116

Query: 442 HIDEFRKRIRQSSVSAENKKMGNSQDVASVQNNID 546
           HIDEFRKRIRQSS + E+KK    Q+VA+ QN+ D
Sbjct: 117 HIDEFRKRIRQSSANGESKKSTMPQNVANTQNSND 151


>ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|222870849|gb|EEF07980.1|
           predicted protein [Populus trichocarpa]
          Length = 1035

 Score =  111 bits (278), Expect = 7e-23
 Identities = 55/123 (44%), Positives = 80/123 (65%)
 Frame = +1

Query: 181 KTLVTEIMNTHALAVDEDDREKENNFLEVVNAEKKLWTSIHSKGLLRKDVQELYHKARAG 360
           K   T +M+T++L   +D +EK +  +EV N EK+LWT +H++GLL  +VQ+LY K  + 
Sbjct: 12  KAFSTPVMDTNSLL--KDQKEKPSLLVEVANLEKQLWTLVHTRGLLYSNVQDLYRKICSS 69

Query: 361 YEDMIINDPEGMELQDVEYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVASVQNN 540
           YE +I++D    ELQD EY LWKLHY+HIDEFRKRI++ S + E       Q   + Q +
Sbjct: 70  YEKLILSDHRLEELQDTEYSLWKLHYRHIDEFRKRIKKFSANRETITFVTPQSKLAAQRS 129

Query: 541 IDD 549
            D+
Sbjct: 130 SDN 132


>ref|XP_003547150.1| PREDICTED: protein SMG7-like [Glycine max]
          Length = 986

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/94 (56%), Positives = 70/94 (74%)
 Frame = +1

Query: 259 LEVVNAEKKLWTSIHSKGLLRKDVQELYHKARAGYEDMIINDPEGMELQDVEYCLWKLHY 438
           +++ N+EK+LW  IHSKGLL  D Q+LYHK R+ YE +I+++    ELQDVEY LWKLHY
Sbjct: 4   VQIGNSEKQLWALIHSKGLLHSDAQDLYHKVRSSYERIILSNHMLSELQDVEYSLWKLHY 63

Query: 439 KHIDEFRKRIRQSSVSAENKKMGNSQDVASVQNN 540
           KHIDEFRK I++SS + E+KK G  Q+ A   +N
Sbjct: 64  KHIDEFRKIIKKSSGNVESKKSGMPQNRAVQGDN 97


>ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|222848753|gb|EEE86300.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/106 (47%), Positives = 74/106 (69%)
 Frame = +1

Query: 232 DDREKENNFLEVVNAEKKLWTSIHSKGLLRKDVQELYHKARAGYEDMIINDPEGMELQDV 411
           D +EK + F+EV N EK+LW  IH+KGLL  +VQ+LY K  +GYE +I++D +  +LQD 
Sbjct: 20  DQKEKPSLFVEVANLEKQLWALIHTKGLLDPNVQDLYRKICSGYERIILSDHKLGDLQDT 79

Query: 412 EYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVASVQNNIDD 549
           EY LWKLHY+HIDE+RKR++++S + E       Q V + + + D+
Sbjct: 80  EYSLWKLHYRHIDEYRKRMKRNSANGETTTFATPQSVVAAKESSDN 125


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