BLASTX nr result

ID: Cnidium21_contig00024478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024478
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29535.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]   121   7e-26
ref|XP_003547150.1| PREDICTED: protein SMG7-like [Glycine max]        112   2e-23
ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>emb|CBI29535.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/115 (56%), Positives = 84/115 (73%)
 Frame = -3

Query: 346 MNTNALAVDEDDRGKENNFLEVVNAEKKLWTLIHSKGLLRKDVQELYHKARAGYEDMIIN 167
           M T++L   +D +GK++ F EVVN EK+LW LIHSKGLL  + Q+LY K R+ Y  +I+N
Sbjct: 1   MGTDSLIPLKDQKGKQSFFAEVVNTEKQLWALIHSKGLLHSETQDLYQKVRSSYVKVILN 60

Query: 166 DPEGMEVQDVEYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVATVQNNID 2
           + E  + QD+EY LWKLHYKHIDEFRKRIRQSS + E+KK    Q+VA  QN+ D
Sbjct: 61  EQETEQPQDIEYSLWKLHYKHIDEFRKRIRQSSANGESKKSTMPQNVANTQNSND 115


>emb|CAN78121.1| hypothetical protein VITISV_041546 [Vitis vinifera]
          Length = 931

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = -3

Query: 286 EVVNAEKKLWTLIHSKGLLRKDVQELYHKARAGYEDMIINDPEGMEVQDVEYCLWKLHYK 107
           +VVN EK+LW LIHSKGLL  + Q LY K R+ Y  +I+N+ E  + QD+EY LWKLHYK
Sbjct: 57  QVVNTEKQLWALIHSKGLLHSETQXLYQKVRSSYVKIILNEQETEQPQDIEYSLWKLHYK 116

Query: 106 HIDEFRKRIRQSSVSAENKKMGNSQDVATVQNNID 2
           HIDEFRKRIRQSS + E+KK    Q+VA  QN+ D
Sbjct: 117 HIDEFRKRIRQSSANGESKKSTMPQNVANTQNSND 151


>ref|XP_003547150.1| PREDICTED: protein SMG7-like [Glycine max]
          Length = 986

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/94 (56%), Positives = 71/94 (75%)
 Frame = -3

Query: 289 LEVVNAEKKLWTLIHSKGLLRKDVQELYHKARAGYEDMIINDPEGMEVQDVEYCLWKLHY 110
           +++ N+EK+LW LIHSKGLL  D Q+LYHK R+ YE +I+++    E+QDVEY LWKLHY
Sbjct: 4   VQIGNSEKQLWALIHSKGLLHSDAQDLYHKVRSSYERIILSNHMLSELQDVEYSLWKLHY 63

Query: 109 KHIDEFRKRIRQSSVSAENKKMGNSQDVATVQNN 8
           KHIDEFRK I++SS + E+KK G  Q+ A   +N
Sbjct: 64  KHIDEFRKIIKKSSGNVESKKSGMPQNRAVQGDN 97


>ref|XP_002329787.1| predicted protein [Populus trichocarpa] gi|222870849|gb|EEF07980.1|
           predicted protein [Populus trichocarpa]
          Length = 1035

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/122 (45%), Positives = 78/122 (63%)
 Frame = -3

Query: 367 KTLVTEIMNTNALAVDEDDRGKENNFLEVVNAEKKLWTLIHSKGLLRKDVQELYHKARAG 188
           K   T +M+TN+L  D+ +  K +  +EV N EK+LWTL+H++GLL  +VQ+LY K  + 
Sbjct: 12  KAFSTPVMDTNSLLKDQKE--KPSLLVEVANLEKQLWTLVHTRGLLYSNVQDLYRKICSS 69

Query: 187 YEDMIINDPEGMEVQDVEYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVATVQNN 8
           YE +I++D    E+QD EY LWKLHY+HIDEFRKRI++ S + E       Q     Q +
Sbjct: 70  YEKLILSDHRLEELQDTEYSLWKLHYRHIDEFRKRIKKFSANRETITFVTPQSKLAAQRS 129

Query: 7   ID 2
            D
Sbjct: 130 SD 131


>ref|XP_002305789.1| predicted protein [Populus trichocarpa] gi|222848753|gb|EEE86300.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/120 (44%), Positives = 80/120 (66%)
 Frame = -3

Query: 361 LVTEIMNTNALAVDEDDRGKENNFLEVVNAEKKLWTLIHSKGLLRKDVQELYHKARAGYE 182
           L   +M+TN+   D+ +  K + F+EV N EK+LW LIH+KGLL  +VQ+LY K  +GYE
Sbjct: 7   LFLPVMDTNSHLNDQKE--KPSLFVEVANLEKQLWALIHTKGLLDPNVQDLYRKICSGYE 64

Query: 181 DMIINDPEGMEVQDVEYCLWKLHYKHIDEFRKRIRQSSVSAENKKMGNSQDVATVQNNID 2
            +I++D +  ++QD EY LWKLHY+HIDE+RKR++++S + E       Q V   + + D
Sbjct: 65  RIILSDHKLGDLQDTEYSLWKLHYRHIDEYRKRMKRNSANGETTTFATPQSVVAAKESSD 124


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