BLASTX nr result

ID: Cnidium21_contig00024476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024476
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
emb|CBI34403.3| unnamed protein product [Vitis vinifera]               70   5e-10
ref|XP_002272569.1| PREDICTED: probable membrane-associated kina...    69   9e-10
ref|XP_002513625.1| hypothetical protein RCOM_1581540 [Ricinus c...    64   3e-08
ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|2...    63   8e-08

>ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|222841955|gb|EEE79502.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
 Frame = +3

Query: 243 QQGGRPAVFRQVCKSLMKSKSSVRTV-----PVPVC--RRDDSALQQQDGIQSAILHCKR 401
           +QG  PA  R VCK L KS+S+         PVPV   RRDDS LQQQDGIQSAILHCKR
Sbjct: 248 KQGNLPAGLRVVCKHLGKSRSASSAAVAAAPPVPVLSNRRDDSLLQQQDGIQSAILHCKR 307

Query: 402 XXXXXXXXXXXXXXQECTVLSRSASESSYQKA 497
                          + +VLSRSAS+ S++K+
Sbjct: 308 -------SFNASRDSDSSVLSRSASDPSHEKS 332


>emb|CBI34403.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
 Frame = +3

Query: 240 KQQGGRPAVFRQVCKSLMKSKSS---VRTVPVPVC---RRDDSALQQQDGIQSAILHCKR 401
           ++QG  PA  R VCK L KS+S+   V  VP   C   RRDDS LQQQDGIQSAILHCKR
Sbjct: 220 QKQGNIPAGLRVVCKHLGKSRSASSAVAAVPSAPCQSRRRDDSLLQQQDGIQSAILHCKR 279

Query: 402 XXXXXXXXXXXXXXQECTVLSRSASESSYQKAASNPQNVS 521
                          + ++LSRS S+ S++K+    +N S
Sbjct: 280 SFNASRDL-------DSSLLSRSVSDPSHEKSLDISRNSS 312


>ref|XP_002272569.1| PREDICTED: probable membrane-associated kinase regulator 2-like
           [Vitis vinifera]
          Length = 452

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
 Frame = +3

Query: 243 QQGGRPAVFRQVCKSLMKSKSS---VRTVPVPVC---RRDDSALQQQDGIQSAILHCKRX 404
           Q G  PA  R VCK L KS+S+   V  VP   C   RRDDS LQQQDGIQSAILHCKR 
Sbjct: 353 QDGNIPAGLRVVCKHLGKSRSASSAVAAVPSAPCQSRRRDDSLLQQQDGIQSAILHCKRS 412

Query: 405 XXXXXXXXXXXXXQECTVLSRSASESSYQKAASNPQNVS 521
                         + ++LSRS S+ S++K+    +N S
Sbjct: 413 FNASRDL-------DSSLLSRSVSDPSHEKSLDISRNSS 444


>ref|XP_002513625.1| hypothetical protein RCOM_1581540 [Ricinus communis]
           gi|223547533|gb|EEF49028.1| hypothetical protein
           RCOM_1581540 [Ricinus communis]
          Length = 382

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
 Frame = +3

Query: 237 EKQQGGRPAVFRQVCKSLMKSKS-SVRTVPVP--VCRRDDSALQQQDGIQSAILHCKRXX 407
           +++QG  PA  R VCK L KSKS S  TV  P  V RRDDS L Q DGIQSAILHCK+  
Sbjct: 286 KEKQGTIPAGIRVVCKHLGKSKSESASTVAPPSTVSRRDDSLLLQHDGIQSAILHCKK-- 343

Query: 408 XXXXXXXXXXXXQECTVLSRSASESSYQKAASNPQ 512
                       ++ ++LSR AS+  +++  ++P+
Sbjct: 344 ------SFNSSSRDSSLLSRFASDPLHERLVASPR 372


>ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|222845264|gb|EEE82811.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
 Frame = +3

Query: 240 KQQGGRPAVFRQVCKSLMKSKSSVRTV-----PVPVC--RRDDSALQQQDGIQSAILHCK 398
           ++QG  P+  R VCK L K +S+         P PV   RRDDS LQQ DGIQSAILHCK
Sbjct: 358 RKQGNLPSGLRVVCKHLGKRRSASAAAVAAAPPGPVLSERRDDSLLQQHDGIQSAILHCK 417

Query: 399 RXXXXXXXXXXXXXXQECTVLSRSASESSYQKA 497
           R               + +VLSRS S+ S++K+
Sbjct: 418 R-------SFNASRDSDSSVLSRSVSDPSHEKS 443


Top