BLASTX nr result
ID: Cnidium21_contig00024469
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024469 (1196 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 582 e-164 ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi... 567 e-159 ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi... 567 e-159 ref|XP_002532046.1| pentatricopeptide repeat-containing protein,... 564 e-158 ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154 >ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Vitis vinifera] gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera] Length = 489 Score = 582 bits (1500), Expect = e-164 Identities = 293/399 (73%), Positives = 338/399 (84%), Gaps = 6/399 (1%) Frame = -3 Query: 1179 SLSLHFHS--SPQFTHLSP----PNLIHTHPCIHTTKPKSSFTCFSMTRPGRKIGYKTEH 1018 SL L+ S SP FT S P +H P +P ++ TRP RK G K + Sbjct: 11 SLQLYSSSTLSPTFTLPSSRFYKPTRLHLPP-----RPSTTVVSCVSTRPRRKPGPKPDK 65 Query: 1017 MSESAELVRTLMRNINDRKPLTTTLDKYVKVVRTEHCFLLFEELGRSDKWLQCLEVFRWM 838 SE ELVR LM+N +PL +TL+KYVKV+RTEHCF LFEELG++DKWLQCLEVFRWM Sbjct: 66 -SEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWM 124 Query: 837 QRQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRD 658 Q+QRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYN+LITAHL+SRD Sbjct: 125 QKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRD 184 Query: 657 KSKALDKALGYFDKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDI 478 KSKAL KALGYFDKMKGMERCKPNIVTYNILLRA AQA+ V+Q ALFK+LN+S+++PDI Sbjct: 185 KSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDI 244 Query: 477 FTFNGMMDAYGKNGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKS 298 FTFNG+MDAYGKNGMI+EME +L++MKSNQ KPDIITFN+LIDSYGR+QEF+KMEQVFKS Sbjct: 245 FTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKS 304 Query: 297 LLRSKERPTLPTFNSMITNYGKARLREKAELVYQKITDMKYTPNFITKECLIIMYGYCDC 118 LLRSKE+PTLPTFNSMITNYGKARL+EKAE V++K+TDM Y PNFIT E LI+MYG+CDC Sbjct: 305 LLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDC 364 Query: 117 VSKAREIYDGMVESEREIKVSTLNAMLEVYCRNSLPTEA 1 +S+AREI+D M+ S++E+KVSTLNAMLEVYC N LP EA Sbjct: 365 ISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEA 403 Score = 65.9 bits (159), Expect = 2e-08 Identities = 43/167 (25%), Positives = 79/167 (47%) Frame = -3 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDKSKALDKALGYF 622 ++ LI G++ + +F + S +P +NS+IT + K++ +KA F Sbjct: 282 FNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNY----GKARLKEKAENVF 337 Query: 621 DKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAYGK 442 KM M PN +TY L+ + + +F ++ S + T N M++ Y Sbjct: 338 KKMTDMGYA-PNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCM 396 Query: 441 NGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFK 301 NG+ E +LLL + + N+ P T+ LL +Y + + E +E++ K Sbjct: 397 NGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTKADQKELLEKLLK 443 >ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Cucumis sativus] Length = 494 Score = 567 bits (1461), Expect = e-159 Identities = 283/398 (71%), Positives = 331/398 (83%) Frame = -3 Query: 1194 SLNFQSLSLHFHSSPQFTHLSPPNLIHTHPCIHTTKPKSSFTCFSMTRPGRKIGYKTEHM 1015 SL F +SS Q + L P + T C S TRP RK G KT+ Sbjct: 6 SLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTR-----VVCIS-TRPSRKFGVKTDR- 58 Query: 1014 SESAELVRTLMRNINDRKPLTTTLDKYVKVVRTEHCFLLFEELGRSDKWLQCLEVFRWMQ 835 SE+ ELVR ++RN +D++PL TLDKYV+V+RTEHCFLLFEELG+ DKWL+CLEVFRWMQ Sbjct: 59 SEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQ 118 Query: 834 RQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDK 655 +QRWYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYN+LITAHL+S+DK Sbjct: 119 KQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDK 178 Query: 654 SKALDKALGYFDKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIF 475 +KAL K L YF+KMKGMERCKPNIVTYNIL RA AQA KVDQV LFKDL++SV++ DI+ Sbjct: 179 AKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIY 238 Query: 474 TFNGMMDAYGKNGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSL 295 T+NG+MDAYGKNG I+EMEL+L +MKSNQ+KPDII+FNLLIDSYG+KQ F+KMEQVFKSL Sbjct: 239 TYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSL 298 Query: 294 LRSKERPTLPTFNSMITNYGKARLREKAELVYQKITDMKYTPNFITKECLIIMYGYCDCV 115 LRSKERPTLPTFNSMITNYGKARLREKAE V++K+ DM Y P+++T E LI+MYG+CDCV Sbjct: 299 LRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCV 358 Query: 114 SKAREIYDGMVESEREIKVSTLNAMLEVYCRNSLPTEA 1 SKAREI+DGMV S +E++VSTLNAML+VYC N LP EA Sbjct: 359 SKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEA 396 Score = 63.9 bits (154), Expect = 8e-08 Identities = 51/202 (25%), Positives = 91/202 (45%) Frame = -3 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDKSKALDKALGYF 622 ++ LI GKK +F + S RP +NS+IT + K++ +KA F Sbjct: 275 FNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNY----GKARLREKAEEVF 330 Query: 621 DKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAYGK 442 KMK M P+ VT L+ V + +F + +S + T N M+D Y Sbjct: 331 RKMKDMGY-DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCI 389 Query: 441 NGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLPT 262 NG+ E +LL + ++ PD T+ LL +Y + + E +E++ K++ ++ P Sbjct: 390 NGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRF 449 Query: 261 FNSMITNYGKARLREKAELVYQ 196 F + G ++ + + + Q Sbjct: 450 FLDALGTIGSSQENQNLQELEQ 471 >ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Cucumis sativus] Length = 528 Score = 567 bits (1461), Expect = e-159 Identities = 283/398 (71%), Positives = 331/398 (83%) Frame = -3 Query: 1194 SLNFQSLSLHFHSSPQFTHLSPPNLIHTHPCIHTTKPKSSFTCFSMTRPGRKIGYKTEHM 1015 SL F +SS Q + L P + T C S TRP RK G KT+ Sbjct: 6 SLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTR-----VVCIS-TRPSRKFGVKTDR- 58 Query: 1014 SESAELVRTLMRNINDRKPLTTTLDKYVKVVRTEHCFLLFEELGRSDKWLQCLEVFRWMQ 835 SE+ ELVR ++RN +D++PL TLDKYV+V+RTEHCFLLFEELG+ DKWL+CLEVFRWMQ Sbjct: 59 SEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQ 118 Query: 834 RQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDK 655 +QRWYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGCRPDTSVYN+LITAHL+S+DK Sbjct: 119 KQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDK 178 Query: 654 SKALDKALGYFDKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIF 475 +KAL K L YF+KMKGMERCKPNIVTYNIL RA AQA KVDQV LFKDL++SV++ DI+ Sbjct: 179 AKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIY 238 Query: 474 TFNGMMDAYGKNGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSL 295 T+NG+MDAYGKNG I+EMEL+L +MKSNQ+KPDII+FNLLIDSYG+KQ F+KMEQVFKSL Sbjct: 239 TYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSL 298 Query: 294 LRSKERPTLPTFNSMITNYGKARLREKAELVYQKITDMKYTPNFITKECLIIMYGYCDCV 115 LRSKERPTLPTFNSMITNYGKARLREKAE V++K+ DM Y P+++T E LI+MYG+CDCV Sbjct: 299 LRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCV 358 Query: 114 SKAREIYDGMVESEREIKVSTLNAMLEVYCRNSLPTEA 1 SKAREI+DGMV S +E++VSTLNAML+VYC N LP EA Sbjct: 359 SKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEA 396 Score = 63.9 bits (154), Expect = 8e-08 Identities = 53/198 (26%), Positives = 90/198 (45%) Frame = -3 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDKSKALDKALGYF 622 ++ LI GKK +F + S RP +NS+IT + K++ +KA F Sbjct: 275 FNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNY----GKARLREKAEEVF 330 Query: 621 DKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAYGK 442 KMK M P+ VT L+ V + +F + +S + T N M+D Y Sbjct: 331 RKMKDMGY-DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCI 389 Query: 441 NGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLPT 262 NG+ E +LL + ++ PD T+ LL +Y + + E +E++ K++ ++ P Sbjct: 390 NGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRF 449 Query: 261 FNSMITNYGKARLREKAE 208 F + G + +EK E Sbjct: 450 FLDALGTIGSS--QEKPE 465 >ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 478 Score = 564 bits (1453), Expect = e-158 Identities = 288/404 (71%), Positives = 338/404 (83%), Gaps = 6/404 (1%) Frame = -3 Query: 1194 SLNFQSLSLHFHSSPQFTHLSPPNLIHT-----HPCIHTTKPKSSFTCFSMTRPGRKIGY 1030 +L+ SL L S FT+ P IH HPC + + + TC S TRP RK + Sbjct: 4 NLSPHSLQLSPLGSSNFTNNFPQ--IHNPTLSWHPCKNLRQ--THITCVS-TRP-RKKRF 57 Query: 1029 KTEHMSESAELVRTLMRNIN-DRKPLTTTLDKYVKVVRTEHCFLLFEELGRSDKWLQCLE 853 SE+ +LVR ++R+ + D+ PL TLDKYV+VVRTEHCFLLFEELGR DKWLQCLE Sbjct: 58 PISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQCLE 117 Query: 852 VFRWMQRQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAH 673 VFRWMQ+QRWYIAD+GVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPD+SVYN+LITAH Sbjct: 118 VFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAH 177 Query: 672 LNSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSV 493 L+S+DK+KAL KALGYF+KMKGM+RC+PN+VTYNILLRA AQA+ V+QV ALFKDL+ S+ Sbjct: 178 LHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSI 237 Query: 492 ITPDIFTFNGMMDAYGKNGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKME 313 ++PDI+T+NG+MDAYGKNGMIREME +L++MKSNQ KPDIITFNLLIDSYG+KQ+F+KME Sbjct: 238 VSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKME 297 Query: 312 QVFKSLLRSKERPTLPTFNSMITNYGKARLREKAELVYQKITDMKYTPNFITKECLIIMY 133 QVFKSLL SKERPTLPTFNSMITNYGKAR +E AE V QK+T MKYTPNFIT E LI+MY Sbjct: 298 QVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLIMMY 357 Query: 132 GYCDCVSKAREIYDGMVESEREIKVSTLNAMLEVYCRNSLPTEA 1 G+CD VSKAREI+D M+ES +E+KVSTLNAML+VYC N LP EA Sbjct: 358 GFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEA 401 >ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Glycine max] Length = 503 Score = 551 bits (1419), Expect = e-154 Identities = 276/387 (71%), Positives = 323/387 (83%), Gaps = 1/387 (0%) Frame = -3 Query: 1158 SSPQFTHLSPPNLIHTHPCIHTTKPKSSFTCFSMTRPGRKIGYKTEHMSESAELVRTLMR 979 SSP F THP P S +C + RP RK K+ H SE+ ELVR L Sbjct: 6 SSPSFASYG------THP---GAAPLSRISCGA--RPKRK---KSNHNSEAQELVRLLTS 51 Query: 978 NI-NDRKPLTTTLDKYVKVVRTEHCFLLFEELGRSDKWLQCLEVFRWMQRQRWYIADNGV 802 I ND++PL TL+KYVK VRT+HCFLLFEEL + D WLQCLEVFRWMQ+QRWYIADNG+ Sbjct: 52 KISNDKEPLLKTLNKYVKQVRTQHCFLLFEELAKHDNWLQCLEVFRWMQKQRWYIADNGI 111 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDKSKALDKALGYF 622 YSKLISVMGKKGQTRMAMWLFSEMRN+GCRPDTSVYN+LITAHL+SRDK+KAL KA+GYF Sbjct: 112 YSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYF 171 Query: 621 DKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAYGK 442 KMKGMERCKPNIVTYNILLRA AQA+ V+QV +LFKDL++S+++PDI+TFNG+MDAYGK Sbjct: 172 QKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGK 231 Query: 441 NGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLPT 262 NGMIREME +L +MKSNQ KPD+ITFNLLIDSYG+KQEF KMEQVFKSLLRSKER +LPT Sbjct: 232 NGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPT 291 Query: 261 FNSMITNYGKARLREKAELVYQKITDMKYTPNFITKECLIIMYGYCDCVSKAREIYDGMV 82 FNSMI NYGKARL++KAE V++++TDM YTP+F+T E LI MYG+CDCVS+A +++D +V Sbjct: 292 FNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELV 351 Query: 81 ESEREIKVSTLNAMLEVYCRNSLPTEA 1 ES+ IKVSTLNAML+VYC N LP EA Sbjct: 352 ESKAHIKVSTLNAMLDVYCINGLPQEA 378 Score = 63.2 bits (152), Expect = 1e-07 Identities = 47/169 (27%), Positives = 79/169 (46%) Frame = -3 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRDKSKALDKALGYF 622 ++ LI GKK + +F + S R +NS+I + +R K KA D F Sbjct: 257 FNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAED----VF 312 Query: 621 DKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAYGK 442 +M M P+ VT+ L+ V + LF +L +S + T N M+D Y Sbjct: 313 KRMTDMGYT-PSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCI 371 Query: 441 NGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSL 295 NG+ +E + L + S ++ PD TF LL +Y + + E ++++ K + Sbjct: 372 NGLPQEADSLFERANSIKIYPDSSTFKLLYKAYTKANQKELLDKLLKHM 420 Score = 61.2 bits (147), Expect = 5e-07 Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 2/214 (0%) Frame = -3 Query: 801 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLNSRD--KSKALDKALG 628 ++ ++ GK G R + + M+++ C+PD +N LI ++ ++ K + + K+L Sbjct: 222 FNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSL- 280 Query: 627 YFDKMKGMERCKPNIVTYNILLRASAQAKKVDQVEALFKDLNDSVITPDIFTFNGMMDAY 448 ++ ER ++ T+N ++ +A+ D+ E +FK + D TP T ++ Y Sbjct: 281 ----LRSKERA--SLPTFNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVTHESLIYMY 334 Query: 447 GKNGMIREMELLLTQMKSNQLKPDIITFNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTL 268 G + L ++ ++ + T N ++D Y ++ + +F+ K P Sbjct: 335 GFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQEADSLFERANSIKIYPDS 394 Query: 267 PTFNSMITNYGKARLREKAELVYQKITDMKYTPN 166 TF + Y KA +E + + + + PN Sbjct: 395 STFKLLYKAYTKANQKELLDKLLKHMDKDGIVPN 428