BLASTX nr result

ID: Cnidium21_contig00024468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024468
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    95   5e-18
emb|CBI27433.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...    87   1e-15
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    87   1e-15

>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 414

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
 Frame = -2

Query: 346 SPNLQELRIS-EAGSCAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173
           SPNL+EL+IS  + +    +   LDFWE +CP D  FK L+ VKM D+S   H++ F+KF
Sbjct: 308 SPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMTDISGLPHEMRFIKF 367

Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKFL 41
           +LE SP+LE+MS++   Y   G+M+MV E+L   RVSP  +IKF+
Sbjct: 368 LLENSPILEIMSITPSVYAIEGRMHMVTELLEFRRVSPQAKIKFV 412


>emb|CBI27433.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
 Frame = -2

Query: 346 SPNLQELRIS-EAGSCAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173
           SPNL+EL+IS  + +    +   LDFWE +CP D  FK L+ VKM D+S   H++ F+KF
Sbjct: 288 SPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMTDISGLPHEMRFIKF 347

Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKFL 41
           +LE SP+LE+MS++   Y   G+M+MV E+L   RVSP  +IKF+
Sbjct: 348 LLENSPILEIMSITPSVYAIEGRMHMVTELLEFRRVSPQAKIKFV 392


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
 Frame = -2

Query: 346 SPNLQELRISEAGSC-AHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173
           SPNL+ELRIS + +  A  +A  L+FW K+CP D TFK L+ VKM D+S   H++EF+KF
Sbjct: 315 SPNLKELRISGSSTAVASVEAPNLEFWAKECPKDCTFKQLKVVKMTDMSGVPHEMEFMKF 374

Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKF 44
           +L  SPVLE MS++   Y   G++NM+ +++   R S   EI F
Sbjct: 375 LLANSPVLETMSITPCVYVMDGRLNMLIQLVRFRRASAEAEIIF 418


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g13570-like [Cucumis sativus]
          Length = 418

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
 Frame = -2

Query: 346 SPNLQELRISEAGS-CAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173
           SPNL+EL+IS + +  A  +A  LDFWE +CPS+ TF  LR VK  D+S   H++EF+K+
Sbjct: 312 SPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVPHEMEFIKY 371

Query: 172 VLERSPVLELMSV-SFPYYYSGKMNMVNEVLSVGRVSPNVEIKFLE 38
           +L   PVLE+MS+    Y    ++NM+ E+L   R SP  EI F++
Sbjct: 372 LLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQ 417


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
 Frame = -2

Query: 346 SPNLQELRISEAGS-CAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173
           SPNL+EL+IS + +  A  +A  LDFWE +CPS+ TF  LR VK  D+S   H++EF+K+
Sbjct: 312 SPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVPHEMEFIKY 371

Query: 172 VLERSPVLELMSV-SFPYYYSGKMNMVNEVLSVGRVSPNVEIKFLE 38
           +L   PVLE+MS+    Y    ++NM+ E+L   R SP  EI F++
Sbjct: 372 LLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQ 417


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