BLASTX nr result
ID: Cnidium21_contig00024468
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024468 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 95 5e-18 emb|CBI27433.3| unnamed protein product [Vitis vinifera] 95 5e-18 ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16 ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 87 1e-15 ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 87 1e-15 >ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis vinifera] Length = 414 Score = 95.1 bits (235), Expect = 5e-18 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 3/105 (2%) Frame = -2 Query: 346 SPNLQELRIS-EAGSCAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173 SPNL+EL+IS + + + LDFWE +CP D FK L+ VKM D+S H++ F+KF Sbjct: 308 SPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMTDISGLPHEMRFIKF 367 Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKFL 41 +LE SP+LE+MS++ Y G+M+MV E+L RVSP +IKF+ Sbjct: 368 LLENSPILEIMSITPSVYAIEGRMHMVTELLEFRRVSPQAKIKFV 412 >emb|CBI27433.3| unnamed protein product [Vitis vinifera] Length = 394 Score = 95.1 bits (235), Expect = 5e-18 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 3/105 (2%) Frame = -2 Query: 346 SPNLQELRIS-EAGSCAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173 SPNL+EL+IS + + + LDFWE +CP D FK L+ VKM D+S H++ F+KF Sbjct: 288 SPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMTDISGLPHEMRFIKF 347 Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKFL 41 +LE SP+LE+MS++ Y G+M+MV E+L RVSP +IKF+ Sbjct: 348 LLENSPILEIMSITPSVYAIEGRMHMVTELLEFRRVSPQAKIKFV 392 >ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1| predicted protein [Populus trichocarpa] Length = 420 Score = 89.7 bits (221), Expect = 2e-16 Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 3/104 (2%) Frame = -2 Query: 346 SPNLQELRISEAGSC-AHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173 SPNL+ELRIS + + A +A L+FW K+CP D TFK L+ VKM D+S H++EF+KF Sbjct: 315 SPNLKELRISGSSTAVASVEAPNLEFWAKECPKDCTFKQLKVVKMTDMSGVPHEMEFMKF 374 Query: 172 VLERSPVLELMSVS-FPYYYSGKMNMVNEVLSVGRVSPNVEIKF 44 +L SPVLE MS++ Y G++NM+ +++ R S EI F Sbjct: 375 LLANSPVLETMSITPCVYVMDGRLNMLIQLVRFRRASAEAEIIF 418 >ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis sativus] Length = 418 Score = 87.0 bits (214), Expect = 1e-15 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 3/106 (2%) Frame = -2 Query: 346 SPNLQELRISEAGS-CAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173 SPNL+EL+IS + + A +A LDFWE +CPS+ TF LR VK D+S H++EF+K+ Sbjct: 312 SPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVPHEMEFIKY 371 Query: 172 VLERSPVLELMSV-SFPYYYSGKMNMVNEVLSVGRVSPNVEIKFLE 38 +L PVLE+MS+ Y ++NM+ E+L R SP EI F++ Sbjct: 372 LLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQ 417 >ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis sativus] Length = 418 Score = 87.0 bits (214), Expect = 1e-15 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 3/106 (2%) Frame = -2 Query: 346 SPNLQELRISEAGS-CAHYKAAGLDFWEKQCPSDFTFKHLRKVKMLDVSN-EHDIEFLKF 173 SPNL+EL+IS + + A +A LDFWE +CPS+ TF LR VK D+S H++EF+K+ Sbjct: 312 SPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKATDMSGVPHEMEFIKY 371 Query: 172 VLERSPVLELMSV-SFPYYYSGKMNMVNEVLSVGRVSPNVEIKFLE 38 +L PVLE+MS+ Y ++NM+ E+L R SP EI F++ Sbjct: 372 LLRNCPVLEIMSIRPCVYVTDRRLNMLIELLKFRRASPEAEILFIQ 417