BLASTX nr result

ID: Cnidium21_contig00024459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024459
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29694.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51
ref|XP_003548348.1| PREDICTED: uncharacterized protein LOC100799...   174   5e-42
ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798...   174   9e-42
gb|ABP01544.1| UPF3, partial [Nicotiana attenuata]                    169   3e-40

>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  207 bits (526), Expect = 9e-52
 Identities = 102/139 (73%), Positives = 114/139 (82%)
 Frame = +1

Query: 1   TQFKTVVEYAPSQRVPKQWSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERRD 180
           TQFKT+VEYAPSQR+PK W KKDGREGTI+KDPEY+EF+E +AKPVENLPSAEIQLERR+
Sbjct: 84  TQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYMEFVELLAKPVENLPSAEIQLERRE 143

Query: 181 AERAGAVKDAPVVTPLMDFIRQKRAAKAGSRRSLSNGKPDRRXXXXXXXXXXXXXLKRGS 360
           AERAGAVKD P+VTPLMDF+RQKRAAK  SRRSLSNGK  RR              KRGS
Sbjct: 144 AERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGSSKRGS 203

Query: 361 DKRRTSNAMYVLRDTSKSS 417
           +KRR S  MYVLRDT+KS+
Sbjct: 204 EKRRLSTTMYVLRDTAKST 222


>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  205 bits (521), Expect = 4e-51
 Identities = 105/141 (74%), Positives = 114/141 (80%)
 Frame = +1

Query: 1   TQFKTVVEYAPSQRVPKQWSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERRD 180
           TQFK +VEY+PSQRVPKQWSKKDGREGTI KDPEYLEFLE IAKPVENLPSAEIQLERR+
Sbjct: 86  TQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIAKPVENLPSAEIQLERRE 145

Query: 181 AERAGAVKDAPVVTPLMDFIRQKRAAKAGSRRSLSNGKPDRRXXXXXXXXXXXXXLKRGS 360
           AERAGA KDAP+VTPLMDF+RQKR AK G RR LSNGK  RR             LKRGS
Sbjct: 146 AERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRR--AGGSGSPSSSSLKRGS 203

Query: 361 DKRRTSNAMYVLRDTSKSSGG 423
           +K+R S  MYVLRDT+KS+ G
Sbjct: 204 EKKRISTTMYVLRDTAKSTSG 224


>ref|XP_003548348.1| PREDICTED: uncharacterized protein LOC100799816 [Glycine max]
          Length = 508

 Score =  174 bits (442), Expect = 5e-42
 Identities = 90/139 (64%), Positives = 105/139 (75%)
 Frame = +1

Query: 1   TQFKTVVEYAPSQRVPKQWSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERRD 180
           +QFK +VEYAPSQRVP+QWSKKDGR+GTIYKD EYLEFLE +AKPVENLPSAEIQLE+R+
Sbjct: 84  SQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLEFLELLAKPVENLPSAEIQLEKRE 143

Query: 181 AERAGAVKDAPVVTPLMDFIRQKRAAKAGSRRSLSNGKPDRRXXXXXXXXXXXXXLKRGS 360
           AER+    D P++TPLMDF+RQKRAAK G RR LSNGK  +R              +RGS
Sbjct: 144 AERS----DIPIITPLMDFVRQKRAAK-GPRRLLSNGKVSQRAGTSSNGSPSSVTSRRGS 198

Query: 361 DKRRTSNAMYVLRDTSKSS 417
            K+R S  MYV RD  K+S
Sbjct: 199 GKKRVSATMYVARDPGKNS 217


>ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798866 [Glycine max]
          Length = 510

 Score =  174 bits (440), Expect = 9e-42
 Identities = 91/139 (65%), Positives = 104/139 (74%)
 Frame = +1

Query: 1   TQFKTVVEYAPSQRVPKQWSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERRD 180
           +QFK +VEYAPSQRVP+QWSKKD R+GTIYKD EYLEFLE +AKPVENLPSAEIQLE+R+
Sbjct: 84  SQFKVIVEYAPSQRVPRQWSKKDLRDGTIYKDSEYLEFLELLAKPVENLPSAEIQLEKRE 143

Query: 181 AERAGAVKDAPVVTPLMDFIRQKRAAKAGSRRSLSNGKPDRRXXXXXXXXXXXXXLKRGS 360
           AER+    D P++TPLMDF+RQKRAAK G RR LSNGK  RR              +RGS
Sbjct: 144 AERS----DIPIITPLMDFVRQKRAAK-GPRRPLSNGKVSRRAGTSSNGGPSSATSRRGS 198

Query: 361 DKRRTSNAMYVLRDTSKSS 417
            K+R S  MYV RD  KSS
Sbjct: 199 GKKRVSATMYVARDPGKSS 217


>gb|ABP01544.1| UPF3, partial [Nicotiana attenuata]
          Length = 168

 Score =  169 bits (427), Expect = 3e-40
 Identities = 85/125 (68%), Positives = 98/125 (78%)
 Frame = +1

Query: 49  KQWSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERRDAERAGAVKDAPVVTPL 228
           K WSKKD RE TI KDPEYLEFLEF+AKPVENLPSAEIQLER++AERAG+ KDAP+VTPL
Sbjct: 1   KHWSKKDAREATILKDPEYLEFLEFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPL 60

Query: 229 MDFIRQKRAAKAGSRRSLSNGKPDRRXXXXXXXXXXXXXLKRGSDKRRTSNAMYVLRDTS 408
           MD+IRQKRAAK G+RRS+SNG+  +R              KRGS+K RTS  MYVLRD+S
Sbjct: 61  MDYIRQKRAAKGGARRSISNGRSTKRVGGASSRTPSSAASKRGSEK-RTSTTMYVLRDSS 119

Query: 409 KSSGG 423
           K+  G
Sbjct: 120 KAGNG 124


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