BLASTX nr result

ID: Cnidium21_contig00024427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024427
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   115   3e-24
gb|ABA18094.1| hAT-like transposase [Olimarabidopsis pumila]          103   1e-20
gb|ABA18106.1| hAT-like transposase [Capsella rubella]                103   2e-20

>ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|222836078|gb|EEE74499.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/108 (57%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   CLASWGLEHKIFTLTLDASFANEAVQRNLRGLLSVMNPQILDGQLVLGNCYTRVLRCLVK 180
           CL+ W LE K+FTLTLD SF+NE +  NLRGLLSV NP +L GQL+ GNCY RVL  L +
Sbjct: 221 CLSDWQLESKLFTLTLDQSFSNETIIGNLRGLLSVKNPFVLHGQLLKGNCYARVLSRLAQ 280

Query: 181 DALVSMGDIIKKVRDSVKYVKAYRGNEDYFNELKQKLQNLSSKSLTID 324
           DAL + GDI+ ++R+SVKYVK    +++ F EL+Q+LQ  S+K L ID
Sbjct: 281 DALSATGDIVMRIRESVKYVKTSEAHDEKFTELRQQLQVPSTKDLIID 328


>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/108 (54%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   CLASWGLEHKIFTLTLDASFANEAVQRNLRGLLSVMNPQILDGQLVLGNCYTRVLRCLVK 180
           CL+ W L  K+FTLTLD SF+NE V  NLRGLLSV NP +L GQL+ G+CY RVL  L +
Sbjct: 253 CLSDWHLRSKLFTLTLDQSFSNENVIGNLRGLLSVKNPFVLHGQLLKGSCYARVLSHLAQ 312

Query: 181 DALVSMGDIIKKVRDSVKYVKAYRGNEDYFNELKQKLQNLSSKSLTID 324
           +AL + G+I++++R+SVKYVK    +++ F EL+Q+LQ  S+K L ID
Sbjct: 313 EALSATGEIVRRIRESVKYVKTSEAHDEKFTELRQQLQVPSTKILIID 360


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/108 (52%), Positives = 79/108 (73%)
 Frame = +1

Query: 1   CLASWGLEHKIFTLTLDASFANEAVQRNLRGLLSVMNPQILDGQLVLGNCYTRVLRCLVK 180
           CLA W LE ++FT+TLD SF++E +  NLRG++SV NP I +GQL++ NC+ RVL  L +
Sbjct: 606 CLADWSLESRLFTITLDQSFSSETMMGNLRGVVSVKNPLIFNGQLLIRNCFARVLSSLAQ 665

Query: 181 DALVSMGDIIKKVRDSVKYVKAYRGNEDYFNELKQKLQNLSSKSLTID 324
           DAL +M D +KK+R+SVKYVK    +E+ F ELK +LQ  S K+L I+
Sbjct: 666 DALGAMTDTVKKIRESVKYVKTSDAHEEKFLELKHQLQVPSVKTLFIN 713


>gb|ABA18094.1| hAT-like transposase [Olimarabidopsis pumila]
          Length = 672

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/108 (49%), Positives = 72/108 (66%)
 Frame = +1

Query: 1   CLASWGLEHKIFTLTLDASFANEAVQRNLRGLLSVMNPQILDGQLVLGNCYTRVLRCLVK 180
           C++ WGLE K+F++T +   +N A + NLR LL + NP ILDGQLV+GNC  R    L K
Sbjct: 262 CVSEWGLEGKLFSVTFNHPASNAAAE-NLRPLLCIKNPGILDGQLVIGNCVARTFSSLAK 320

Query: 181 DALVSMGDIIKKVRDSVKYVKAYRGNEDYFNELKQKLQNLSSKSLTID 324
           D L    D+IK +RDSVK+VK    +E+ F ELK++LQ  S K L++D
Sbjct: 321 DVLEKGKDVIKNIRDSVKHVKTSESHEERFVELKEQLQVPSEKVLSLD 368


>gb|ABA18106.1| hAT-like transposase [Capsella rubella]
          Length = 665

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/108 (48%), Positives = 73/108 (67%)
 Frame = +1

Query: 1   CLASWGLEHKIFTLTLDASFANEAVQRNLRGLLSVMNPQILDGQLVLGNCYTRVLRCLVK 180
           C++ WGLE K+F++T +   +N AV+ N++ LL + NP ILDGQLV+GNC  R    L K
Sbjct: 262 CVSEWGLEGKLFSVTFNHPASNTAVE-NIKPLLCIKNPGILDGQLVIGNCVARTFSSLAK 320

Query: 181 DALVSMGDIIKKVRDSVKYVKAYRGNEDYFNELKQKLQNLSSKSLTID 324
           D L    D+IK +RDSVK+VK    +E+ F ELK++LQ  S K L++D
Sbjct: 321 DVLEKGKDVIKNIRDSVKHVKTSESHEERFVELKEQLQVPSEKVLSLD 368


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