BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024423
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...   135   3e-30
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [S...   119   3e-25

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic [Vitis vinifera]
            gi|302143764|emb|CBI22625.3| unnamed protein product
            [Vitis vinifera]
          Length = 880

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/129 (59%), Positives = 102/129 (79%)
 Frame = -3

Query: 392  YVLLAYMYEDFGQPELGDKTRRLMKENGLRKTPGQSWIELQNKMHFFIAGDKMHRQINEI 213
            YVLLA +Y+D G+ ELG+KTRR+M+E G+RK PGQSW+E +N +H F AGD  H QI +I
Sbjct: 726  YVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKI 785

Query: 212  HEKLDFVISEIKIMGYPYEANKATMHHSEKLAVIFGLLNAPSNAPIRIIKNIRICKDCHD 33
            HEK++ +I++ +  G  Y+ N+A  HHSEKLAV FGL++ P  APIRIIKNIRIC+DCHD
Sbjct: 786  HEKIESLIAQFRNQGIWYQENRALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHD 845

Query: 32   FMVNLTLLV 6
            F++N+T LV
Sbjct: 846  FIMNVTRLV 854


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355481230|gb|AES62433.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/130 (48%), Positives = 96/130 (73%)
 Frame = -3

Query: 395  IYVLLAYMYEDFGQPELGDKTRRLMKENGLRKTPGQSWIELQNKMHFFIAGDKMHRQINE 216
            IY+LLA +Y++ G  + G+KTRRLM+E GLR++PGQ W+E+++++H F AG+K++   +E
Sbjct: 726  IYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKINE--DE 783

Query: 215  IHEKLDFVISEIKIMGYPYEANKATMHHSEKLAVIFGLLNAPSNAPIRIIKNIRICKDCH 36
            I EKL+F+I+E +   Y Y+ N+   +H E+LAV FG+LNAPS +PIRI KN  IC  CH
Sbjct: 784  ITEKLEFLITEFRNRRYQYQENEDKFYHPEQLAVAFGVLNAPSTSPIRIYKNSLICSHCH 843

Query: 35   DFMVNLTLLV 6
             F++  T ++
Sbjct: 844  TFIMLSTQVI 853


>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
            chloroplastic-like [Glycine max]
          Length = 903

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/130 (49%), Positives = 98/130 (75%)
 Frame = -3

Query: 395  IYVLLAYMYEDFGQPELGDKTRRLMKENGLRKTPGQSWIELQNKMHFFIAGDKMHRQINE 216
            IY+LLA +Y++ G P+ GDKTR+LM+E GLR++P Q W+E+++K++ F A +K+    +E
Sbjct: 728  IYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLFSAREKIGN--DE 785

Query: 215  IHEKLDFVISEIKIMGYPYEANKATMHHSEKLAVIFGLLNAPSNAPIRIIKNIRICKDCH 36
            I+EKL+ +I+EIK  GYPY+ ++  ++HSE+LA+ FG+L+ P+ APIRI KN  IC  CH
Sbjct: 786  INEKLESLITEIKNRGYPYQESEDKLYHSEQLALAFGVLSVPTLAPIRINKNSLICTHCH 845

Query: 35   DFMVNLTLLV 6
             F++ LT  V
Sbjct: 846  SFIMLLTQFV 855


>ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Brachypodium distachyon]
          Length = 886

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/120 (46%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = -3

Query: 392  YVLLAYMYEDFGQPELGDKTRRLMKENGLRKTPGQSWIELQNKMHFFIAGDKMHRQINEI 213
            Y+LLA MY D G+ +   + R+LM++ G++K+PG SW+E+ N++H F A D  H Q+  I
Sbjct: 731  YMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAI 790

Query: 212  HEKLDFVISEIKIMGY-PYEANKATMHHSEKLAVIFGLLNAPSNAPIRIIKNIRICKDCH 36
             EKLD ++ +I  +GY   E+ ++ +HHSEKLAV FG+++ P+  PI I+KN+RIC DCH
Sbjct: 791  REKLDELMEKIAHLGYVRTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCH 850


>ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
            gi|241928942|gb|EES02087.1| hypothetical protein
            SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/133 (44%), Positives = 85/133 (63%), Gaps = 11/133 (8%)
 Frame = -3

Query: 392  YVLLAYMYEDFGQPELGDKTRRLMKENGLRKTPGQSWIELQNKMHFFIAGDKMHRQINEI 213
            YV+L  MY D G+  L  KTR LMKE G++K PG SWIEL++ +H F+AGDK H + N I
Sbjct: 620  YVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAI 679

Query: 212  HEKLDFVISEIKIM-----------GYPYEANKATMHHSEKLAVIFGLLNAPSNAPIRII 66
            ++KL  ++S+I+ +           G           HSEK+AV FG+++ P +APIR++
Sbjct: 680  YKKLAEMLSKIEKLANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVM 739

Query: 65   KNIRICKDCHDFM 27
            KN+R+C+DCH  M
Sbjct: 740  KNLRVCRDCHSTM 752