BLASTX nr result
ID: Cnidium21_contig00024404
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024404 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c... 72 4e-11 ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr... 68 7e-10 >ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis] gi|223540079|gb|EEF41656.1| shikimate dehydrogenase, putative [Ricinus communis] Length = 515 Score = 72.4 bits (176), Expect = 4e-11 Identities = 37/62 (59%), Positives = 43/62 (69%) Frame = +3 Query: 153 FKNQLLVCATLECESIEEMASSMEKAKEEGADLVELSIHSLNFSHISXXXXXXXXRPLPA 332 F+N LLVC LECE+ EM S MEKA+ EGADLVEL + S++FSHIS R LPA Sbjct: 3 FQNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMSFSHISQVEKLIKLRTLPA 62 Query: 333 IV 338 IV Sbjct: 63 IV 64 >ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] Length = 504 Score = 68.2 bits (165), Expect = 7e-10 Identities = 35/62 (56%), Positives = 42/62 (67%) Frame = +3 Query: 153 FKNQLLVCATLECESIEEMASSMEKAKEEGADLVELSIHSLNFSHISXXXXXXXXRPLPA 332 FKN LLVC LECE+ EM SSM++A+ EGADL EL + SL+FSH S R LP+ Sbjct: 3 FKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLSFSHNSEVEKLIKQRTLPS 62 Query: 333 IV 338 IV Sbjct: 63 IV 64