BLASTX nr result

ID: Cnidium21_contig00024404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024404
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...    72   4e-11
ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...    68   7e-10

>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = +3

Query: 153 FKNQLLVCATLECESIEEMASSMEKAKEEGADLVELSIHSLNFSHISXXXXXXXXRPLPA 332
           F+N LLVC  LECE+  EM S MEKA+ EGADLVEL + S++FSHIS        R LPA
Sbjct: 3   FQNNLLVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMSFSHISQVEKLIKLRTLPA 62

Query: 333 IV 338
           IV
Sbjct: 63  IV 64


>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = +3

Query: 153 FKNQLLVCATLECESIEEMASSMEKAKEEGADLVELSIHSLNFSHISXXXXXXXXRPLPA 332
           FKN LLVC  LECE+  EM SSM++A+ EGADL EL + SL+FSH S        R LP+
Sbjct: 3   FKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLSFSHNSEVEKLIKQRTLPS 62

Query: 333 IV 338
           IV
Sbjct: 63  IV 64


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