BLASTX nr result

ID: Cnidium21_contig00024403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024403
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Viti...   365   1e-98
ref|XP_002528452.1| conserved hypothetical protein [Ricinus comm...   334   2e-89
ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
emb|CAN82069.1| hypothetical protein VITISV_010008 [Vitis vinifera]   330   5e-88
ref|XP_002312075.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87

>ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Vitis vinifera]
          Length = 1316

 Score =  365 bits (937), Expect = 1e-98
 Identities = 196/356 (55%), Positives = 240/356 (67%), Gaps = 3/356 (0%)
 Frame = +3

Query: 3    LIPPPMFLFELRFPCAIREMAFWSKISKTLLAVSLSDSALCVVELPVVDSWEELDGKEFN 182
            L+PPPM+LF L+F   IR++AF++K SK LLA  LSD  LCV ELP +D+WEEL+GKE +
Sbjct: 372  LMPPPMYLFNLKFSSTIRDIAFYTKNSKNLLAAFLSDGCLCVAELPPLDTWEELEGKELS 431

Query: 183  VEPASGEAL-GSSVHLLWLDSHVLLNVPHSGFNXXXXXXXXXXXXXXMP--CIQEIEIMC 353
            V+ +S E + GS VHL+WLD+H+LL V H GF+              +    +QEIE++C
Sbjct: 432  VDASSSETIFGSFVHLIWLDAHILLGVSHFGFSHSNYFSQTPSSKDMLHGYYLQEIELLC 491

Query: 354  LENHIPGTVTCSGWNAKISSQISLEGLVIGLARNPVFNGSAFVQFIDGNIFEYKKQSGTV 533
             E+H+PG  TCSGW+AKI++QI L+GLVIGLA NP    SAFVQF  G +FEY    G +
Sbjct: 492  SEDHVPGLGTCSGWHAKITNQIPLDGLVIGLAPNPTKKCSAFVQFDGGKVFEYIPNLG-I 550

Query: 534  VPSIGNRTDMGFSSSCPWMSVVPVGGYDPSNPFLLFGLDNFSRLHVGGRTLXXXXXXXXX 713
            +       DM  SSSCPWMSVVPVG    S P LLFGLD+  RLHVGG+ +         
Sbjct: 551  MEGAPKTEDMSLSSSCPWMSVVPVGDSGSSRP-LLFGLDDNGRLHVGGKIICNNCRSFSF 609

Query: 714  XXXXPDQMITHLILTTKQDLLFVIEISDILFGQLDAKYDNFLPVIKKRRGXXXXXXXXXX 893
                 D  ITHLIL TKQDLLFVI+I DIL G+L+ KY+NF+    KRR           
Sbjct: 610  YSNSADLAITHLILATKQDLLFVIDIDDILDGKLEVKYENFIHAGNKRREEDNRNFITIW 669

Query: 894  XXGAKVIGVLHGDESAVIVQTIRGNLECIYPRKLVVASIVNALGQRRFKDALHMVR 1061
              GAKVIGVLHGDE+AVI+QT RGNLECIYPRKLV+ASI+NAL Q RF+D L MVR
Sbjct: 670  ERGAKVIGVLHGDEAAVILQTARGNLECIYPRKLVLASIINALVQSRFRDGLLMVR 725


>ref|XP_002528452.1| conserved hypothetical protein [Ricinus communis]
            gi|223532128|gb|EEF33935.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1335

 Score =  334 bits (856), Expect = 2e-89
 Identities = 188/359 (52%), Positives = 227/359 (63%), Gaps = 6/359 (1%)
 Frame = +3

Query: 3    LIPPPMFLFELRFPCAIREMAFWSKISKTLLAVSLSDSALCVVELPVVDSWEELDGKEFN 182
            L+PPP+ LF L+FP A+R++AF+ K SK  +A  LSD  LCVVELP  D+WEELDGKE  
Sbjct: 376  LMPPPLHLFNLKFPSAVRDVAFYPKKSKNFVAAFLSDGCLCVVELPEFDTWEELDGKEIM 435

Query: 183  VEPA-SGEALGSSVHLLWLDSHVLLNVPHSGFNXXXXXXXXXXXXXXMP--CIQEIEIMC 353
            VE   S   LG+  HL WLDSHVLL V H GF+                   +QEIEI C
Sbjct: 436  VEACISDTVLGTLAHLTWLDSHVLLAVSHYGFSHSNCFSYTSLGEEEHHGFYLQEIEIAC 495

Query: 354  LENHIPGTVTCSGWNAKISSQISLEGLVIGLARNPVFNGSAFVQFIDGNIFEYKKQSGTV 533
             E+H+PG VT SGW+AK+S    LE LVIG+  NPV   SAFVQF  G I EY    G  
Sbjct: 496  SEDHVPGLVTGSGWHAKVSHINYLEDLVIGITPNPVERCSAFVQFDAGKICEYTSTLGFG 555

Query: 534  VPSIGNRTD---MGFSSSCPWMSVVPVGGYDPSNPFLLFGLDNFSRLHVGGRTLXXXXXX 704
             P  G  T+   M FSSSCPWM+ V  G  +P    LLFGLD+  RLH GG+ L      
Sbjct: 556  TP--GGATEHYSMNFSSSCPWMTAVNSGSLNP----LLFGLDDIGRLHFGGKILCNNCSS 609

Query: 705  XXXXXXXPDQMITHLILTTKQDLLFVIEISDILFGQLDAKYDNFLPVIKKRRGXXXXXXX 884
                    DQ+ITHLIL TKQD LF+++ISDIL  +L++KY+ F+ V  +RR        
Sbjct: 610  LSFYSNLADQVITHLILATKQDFLFIVDISDILHEELESKYEKFVHVDNRRREEQNMNFI 669

Query: 885  XXXXXGAKVIGVLHGDESAVIVQTIRGNLECIYPRKLVVASIVNALGQRRFKDALHMVR 1061
                 GAK+IG+LHGD + VI+QTIRGNLECIYPRKLV++SIVNAL Q RF+DAL MVR
Sbjct: 670  QIWERGAKIIGILHGDAATVIIQTIRGNLECIYPRKLVLSSIVNALIQGRFRDALLMVR 728


>ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|222864279|gb|EEF01410.1|
            predicted protein [Populus trichocarpa]
          Length = 1326

 Score =  332 bits (850), Expect = 1e-88
 Identities = 184/357 (51%), Positives = 229/357 (64%), Gaps = 4/357 (1%)
 Frame = +3

Query: 3    LIPPPMFLFELRFPCAIREMAFWSKISKTLLAVSLSDSALCVVELPVVDSWEELDGKEFN 182
            L+PPP+ LF L+FP A+R++A +S  SK  +A  LSD +L VVELP  D+WE+L+ KEF 
Sbjct: 380  LMPPPLHLFSLKFPSAVRDLALYSNNSKNRVAAFLSDGSLGVVELPDPDTWEDLEEKEFT 439

Query: 183  VEPASGEA-LGSSVHLLWLDSHVLLNVPHSGFNXXXXXXXXXXXXXXMP--CIQEIEIMC 353
            VE +  E   GS V+L WLDSH+LL V H GF+              +   C+QEIE++C
Sbjct: 440  VEASISETGFGSFVNLTWLDSHILLAVSHYGFSHSNCASHSSMGEDGLSGFCLQEIELLC 499

Query: 354  LENHIPGTVTCSGWNAKISSQISLEGLVIGLARNPVFNGSAFVQFIDGNIFEYKKQSGTV 533
             E+H+P  VT SGW+AKIS +  LEGLVIG+A NP    SAFVQF  GNI EY    G  
Sbjct: 500  SEDHVPSLVTGSGWHAKISHRNYLEGLVIGIAPNPAKKRSAFVQFDGGNIVEYTSMLGLA 559

Query: 534  VPSIGNR-TDMGFSSSCPWMSVVPVGGYDPSNPFLLFGLDNFSRLHVGGRTLXXXXXXXX 710
            V     +  DM FSSSCPWMSV          P LLFGLD+  RLH GG+ L        
Sbjct: 560  VTGGSTKHDDMSFSSSCPWMSVAKASDSGSLKP-LLFGLDDIGRLHFGGKVLCNNCSSFS 618

Query: 711  XXXXXPDQMITHLILTTKQDLLFVIEISDILFGQLDAKYDNFLPVIKKRRGXXXXXXXXX 890
                  DQ++THLIL+TKQD LFV+EI DIL G+++ KY+NF+     RR          
Sbjct: 619  CYSNLADQVVTHLILSTKQDFLFVVEIGDILHGEIELKYENFVHT-GNRRKEENMNFINI 677

Query: 891  XXXGAKVIGVLHGDESAVIVQTIRGNLECIYPRKLVVASIVNALGQRRFKDALHMVR 1061
               GAK+IGVLHGD++AVI+QT RGNLE I+PRKLV+ASIVNAL QRRF+DAL +VR
Sbjct: 678  WERGAKIIGVLHGDDAAVIIQTTRGNLESIHPRKLVLASIVNALIQRRFRDALLLVR 734


>emb|CAN82069.1| hypothetical protein VITISV_010008 [Vitis vinifera]
          Length = 1533

 Score =  330 bits (845), Expect = 5e-88
 Identities = 185/354 (52%), Positives = 224/354 (63%), Gaps = 1/354 (0%)
 Frame = +3

Query: 3    LIPPPMFLFELRFPCAIREMAFWSKISKTLLAVSLSDSALCVVELPVVDSWEELDGKEFN 182
            L+PPPM+LF L+F   IR++AF++K SK LLA  LSD  LCV ELP +D+WEEL+GKE +
Sbjct: 625  LMPPPMYLFNLKFSSTIRDIAFYTKNSKNLLAAFLSDGCLCVAELPPLDTWEELEGKELS 684

Query: 183  VEPASGEAL-GSSVHLLWLDSHVLLNVPHSGFNXXXXXXXXXXXXXXMPCIQEIEIMCLE 359
            V+ +S E + GS VHL+WLD+H+LL V H GF+              +  I         
Sbjct: 685  VDASSSETIFGSFVHLIWLDAHILLGVSHFGFSHSNYFSQTPSSKDMLHGIMS------- 737

Query: 360  NHIPGTVTCSGWNAKISSQISLEGLVIGLARNPVFNGSAFVQFIDGNIFEYKKQSGTVVP 539
                      GW+AKI++QI L+GLVIGLA NP    SAFVQF  G +FEY    G ++ 
Sbjct: 738  ---QVWEPAPGWHAKITNQIPLDGLVIGLAPNPTKKCSAFVQFDGGKVFEYIPNLG-IMG 793

Query: 540  SIGNRTDMGFSSSCPWMSVVPVGGYDPSNPFLLFGLDNFSRLHVGGRTLXXXXXXXXXXX 719
                  DM  SSSCPWMSVVPVG    S P LLFGLD+  RLHVGG+ +           
Sbjct: 794  GAPKTEDMSLSSSCPWMSVVPVGDSGSSRP-LLFGLDDNGRLHVGGKIICNNCRSFSFYS 852

Query: 720  XXPDQMITHLILTTKQDLLFVIEISDILFGQLDAKYDNFLPVIKKRRGXXXXXXXXXXXX 899
               D  ITHLIL TKQDLLFVI+I DIL G+L+ KY+NF+    KRR             
Sbjct: 853  NSADLAITHLILATKQDLLFVIDIDDILDGKLEVKYENFIHAGNKRREEDNRNFITIWER 912

Query: 900  GAKVIGVLHGDESAVIVQTIRGNLECIYPRKLVVASIVNALGQRRFKDALHMVR 1061
            GAKVIGVLHGDE+AVI+QT RGNLECIYPRKLV+ASI+NAL Q RF+D L MVR
Sbjct: 913  GAKVIGVLHGDEAAVILQTARGNLECIYPRKLVLASIINALVQSRFRDGLLMVR 966


>ref|XP_002312075.1| predicted protein [Populus trichocarpa] gi|222851895|gb|EEE89442.1|
            predicted protein [Populus trichocarpa]
          Length = 1340

 Score =  328 bits (840), Expect = 2e-87
 Identities = 187/359 (52%), Positives = 227/359 (63%), Gaps = 6/359 (1%)
 Frame = +3

Query: 3    LIPPPMFLFELRFPCAIREMAFWSKISKTLLAVSLSDSALCVVELPVVDSWEELDGKEFN 182
            L+PPP+ LF L+FP A+R++A +S  SK  +A  LSD +L VVELP  D+WEEL+ KEF 
Sbjct: 394  LMPPPLHLFSLKFPRAVRDVALYSNNSKNSVAAFLSDGSLGVVELPDPDTWEELEEKEFG 453

Query: 183  VEPASGEA-LGSSVHLLWLDSHVLLNVPHSGFNXXXXXXXXXXXXXXMP--CIQEIEIMC 353
            VE +  E   GS VHL WLDSH+LL V H GF               +    +QEIE++C
Sbjct: 454  VEASISETGFGSFVHLTWLDSHILLAVSHYGFTQSTCASDSSMGEDGLSGFYLQEIELVC 513

Query: 354  LENHIPGTVTCSGWNAKISSQISLEGLVIGLARNPVFNGSAFVQFIDGNIFEYKKQSGTV 533
             E+H+P  VT SGW+A+IS +  LEGLVIG+A NP    SAFVQF  G I EY    G  
Sbjct: 514  SEDHVPSLVTGSGWHARISHRNYLEGLVIGIAPNPAKKCSAFVQFDGGKIVEYASILG-- 571

Query: 534  VPSIGNRT---DMGFSSSCPWMSVVPVGGYDPSNPFLLFGLDNFSRLHVGGRTLXXXXXX 704
            +   G  T   DM FSSSCPWMS   V       P LLFGLD+  RLH GG+ L      
Sbjct: 572  LAGTGGSTKHDDMSFSSSCPWMSAAQVSDSGSLKP-LLFGLDDIGRLHFGGKVLCNNCSS 630

Query: 705  XXXXXXXPDQMITHLILTTKQDLLFVIEISDILFGQLDAKYDNFLPVIKKRRGXXXXXXX 884
                    DQ+ITHLIL+TKQD LF +EISDIL G+L+ KY+NF+     RR        
Sbjct: 631  FSLYSNLADQVITHLILSTKQDFLFAVEISDILHGELELKYENFVHT-GNRRKEENMNFI 689

Query: 885  XXXXXGAKVIGVLHGDESAVIVQTIRGNLECIYPRKLVVASIVNALGQRRFKDALHMVR 1061
                 GAK+IGVLHGD +AV++QT RGNLECIYPRKLV+ASIVNAL QRRF+DAL +VR
Sbjct: 690  NIWERGAKIIGVLHGDAAAVVIQTTRGNLECIYPRKLVLASIVNALIQRRFRDALLLVR 748


Top