BLASTX nr result

ID: Cnidium21_contig00024396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024396
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   379   e-106
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   377   e-105
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   380   e-104
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   380   e-104
ref|XP_002302805.1| outward rectifying potassium channel [Populu...   374   e-102

>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  379 bits (972), Expect(2) = e-106
 Identities = 189/248 (76%), Positives = 217/248 (87%), Gaps = 2/248 (0%)
 Frame = +2

Query: 347  KPIPSSASLVKQAALLLIMYLFLGVLIYAFNRDHFSGIETNPVIDAIYFCIVTMCTIGYG 526
            KP   S S+++QA  LL +YL LGV+IY+FNRD+FSGIET+ V+DA+YFCIVTMCTIGYG
Sbjct: 94   KPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYG 153

Query: 527  DIAPSSAAAKIFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIEENSVE--GFSVK 700
            DIAP + A K+FAC+FVLVGFGFIDILLSGVVNYVLDLQENMILTGI+       GFS +
Sbjct: 154  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSAR 213

Query: 701  NYIYDKAKGRMRIRLKVGLAIGVVFLCIGFGSVVLYYMEDLSVIDSFYLSVMSVTTVGYG 880
            NYI D  KGRMRIRLKVGLA+GVV LCIG G++VLY++E+L  ID+ YLSVMSVTTVGYG
Sbjct: 214  NYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTTVGYG 273

Query: 881  DRAFKSPQGRLFASIWLLFSTLAVARAFLYLAEARIDKRHRRIAKWVLHREITVDDLVAA 1060
            DRAFK+  GRLFA+IWLLFSTLAVARAFLYLAEARIDKRHRRI KWVLHREITV+DL+AA
Sbjct: 274  DRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAA 333

Query: 1061 DLNHNGFI 1084
            D+N+NGFI
Sbjct: 334  DINNNGFI 341



 Score = 32.7 bits (73), Expect(2) = e-106
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 225 RKTLHRCRSSPAMTVMHDTR 284
           RKT+HRC+++PA+ VM D +
Sbjct: 67  RKTIHRCKTAPALAVMRDAK 86


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
            channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  377 bits (968), Expect(2) = e-105
 Identities = 188/248 (75%), Positives = 217/248 (87%), Gaps = 2/248 (0%)
 Frame = +2

Query: 347  KPIPSSASLVKQAALLLIMYLFLGVLIYAFNRDHFSGIETNPVIDAIYFCIVTMCTIGYG 526
            KP   S S+++QA  LL +YL LGV+IY+FNRD+FSGIET+ V+DA+YFCIVTMCTIGYG
Sbjct: 94   KPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYG 153

Query: 527  DIAPSSAAAKIFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIEENSVE--GFSVK 700
            DIAP + A K+FAC+FVLVGFGFIDILLSGVVNYVLDLQENMILTGI+       GFS +
Sbjct: 154  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSAR 213

Query: 701  NYIYDKAKGRMRIRLKVGLAIGVVFLCIGFGSVVLYYMEDLSVIDSFYLSVMSVTTVGYG 880
            NYI D  KGRMRIRLKVGLA+GVV LCIG G++VLY++E+L  ID+ YLSVMSVT+VGYG
Sbjct: 214  NYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYG 273

Query: 881  DRAFKSPQGRLFASIWLLFSTLAVARAFLYLAEARIDKRHRRIAKWVLHREITVDDLVAA 1060
            DRAFK+  GRLFA+IWLLFSTLAVARAFLYLAEARIDKRHRRI KWVLHREITV+DL+AA
Sbjct: 274  DRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLLAA 333

Query: 1061 DLNHNGFI 1084
            D+N+NGFI
Sbjct: 334  DINNNGFI 341



 Score = 32.7 bits (73), Expect(2) = e-105
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 225 RKTLHRCRSSPAMTVMHDTR 284
           RKT+HRC+++PA+ VM D +
Sbjct: 67  RKTIHRCKTAPALAVMRDAK 86


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222861033|gb|EEE98575.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 318

 Score =  380 bits (976), Expect(2) = e-104
 Identities = 187/251 (74%), Positives = 217/251 (86%), Gaps = 3/251 (1%)
 Frame = +2

Query: 341  VAKPIPSSASLVKQAALLLIMYLFLGVLIYAFNRDHFSGIETNPVIDAIYFCIVTMCTIG 520
            + KP P S S+++QA  LL MYL LGV+IY+FN DHFSGIET+PV+DA+YFCIVTMCTIG
Sbjct: 23   IPKPQPDSTSIIRQATFLLSMYLLLGVIIYSFNTDHFSGIETHPVVDALYFCIVTMCTIG 82

Query: 521  YGDIAPSSAAAKIFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIE---ENSVEGF 691
            YGDI P +   K+FAC+FVLVGFGFIDILLSG+VNYVLDLQE+MILTGIE     + EGF
Sbjct: 83   YGDITPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGIEMGKNRNHEGF 142

Query: 692  SVKNYIYDKAKGRMRIRLKVGLAIGVVFLCIGFGSVVLYYMEDLSVIDSFYLSVMSVTTV 871
            S  +YI+D  KGRMRIRLKVGLA+GVV LCIG G++VLY++EDL  IDS YL+VMSVTTV
Sbjct: 143  SATDYIFDVKKGRMRIRLKVGLALGVVVLCIGIGTLVLYFLEDLDWIDSVYLAVMSVTTV 202

Query: 872  GYGDRAFKSPQGRLFASIWLLFSTLAVARAFLYLAEARIDKRHRRIAKWVLHREITVDDL 1051
            GYGDRAFK+  GRLFA+IWLL STLAVARAFLYLAEARIDKRHRRI  WVLHR+ITV+DL
Sbjct: 203  GYGDRAFKTLPGRLFAAIWLLVSTLAVARAFLYLAEARIDKRHRRITNWVLHRDITVEDL 262

Query: 1052 VAADLNHNGFI 1084
            +AAD+N+NGFI
Sbjct: 263  LAADMNNNGFI 273



 Score = 26.6 bits (57), Expect(2) = e-104
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 234 LHRCRSSPAMTVMHD 278
           LHRC+++PAM VM +
Sbjct: 1   LHRCKTAPAMVVMRE 15


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
            [Ricinus communis] gi|223545669|gb|EEF47173.1|
            Calcium-activated outward-rectifying potassium channel,
            putative [Ricinus communis]
          Length = 390

 Score =  380 bits (975), Expect(2) = e-104
 Identities = 187/250 (74%), Positives = 218/250 (87%), Gaps = 4/250 (1%)
 Frame = +2

Query: 347  KPIPSSASLVKQAALLLIMYLFLGVLIYAFNRDHFSGIETNPVIDAIYFCIVTMCTIGYG 526
            KP   S+S+++QA  LL +YL LGV+IY+FNRD+FSGIET+PV+DA+YFCIVTMCTIGYG
Sbjct: 92   KPQSESSSIIRQAIFLLFLYLLLGVVIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYG 151

Query: 527  DIAPSSAAAKIFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIE----ENSVEGFS 694
            DIAP + A K+FAC+FVLVGFGFIDILLSGVVNYVLDLQE+MIL GI+      + EGFS
Sbjct: 152  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQESMILAGIQMGNNRTAHEGFS 211

Query: 695  VKNYIYDKAKGRMRIRLKVGLAIGVVFLCIGFGSVVLYYMEDLSVIDSFYLSVMSVTTVG 874
             +NYI D  KGRMRIRLKVGLA+GVV LCIG G++VLYY+EDL  IDS YL+VMSVTTVG
Sbjct: 212  ARNYIVDVEKGRMRIRLKVGLALGVVVLCIGIGTLVLYYLEDLDCIDSIYLAVMSVTTVG 271

Query: 875  YGDRAFKSPQGRLFASIWLLFSTLAVARAFLYLAEARIDKRHRRIAKWVLHREITVDDLV 1054
            YGDR FK+  GRLFA+IWLL S+LAVARAFLYLAEARIDKRHRRI KWVLHR+ITV+DL+
Sbjct: 272  YGDRVFKTLPGRLFAAIWLLVSSLAVARAFLYLAEARIDKRHRRITKWVLHRDITVEDLI 331

Query: 1055 AADLNHNGFI 1084
            AAD+N+NGFI
Sbjct: 332  AADINNNGFI 341



 Score = 26.2 bits (56), Expect(2) = e-104
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 153 SSVSSDNYNSNPTTIPLFFNSSNNRK---TLHRCRSSPAMTVMHDTR 284
           S +        P +  +    S  RK   +LHR +++PAM VM D +
Sbjct: 38  SPILFSEIQEQPVSTAILGAPSTQRKKPGSLHRSKTAPAMVVMRDLK 84


>ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222844531|gb|EEE82078.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 379

 Score =  374 bits (961), Expect(2) = e-102
 Identities = 186/251 (74%), Positives = 216/251 (86%), Gaps = 3/251 (1%)
 Frame = +2

Query: 341  VAKPIPSSASLVKQAALLLIMYLFLGVLIYAFNRDHFSGIETNPVIDAIYFCIVTMCTIG 520
            + KP   S S+++QA  LL +YL LGV+IY+FN DHFSG ET+PV+DA+YFCIVTMCTIG
Sbjct: 80   IPKPQSESNSIIRQAIFLLSLYLLLGVVIYSFNTDHFSGTETHPVVDALYFCIVTMCTIG 139

Query: 521  YGDIAPSSAAAKIFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIE---ENSVEGF 691
            YGDIAP +   K+FAC+FVLVGFGFIDILLSG+VNYVLDLQE+MILTGIE     + EGF
Sbjct: 140  YGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGIEMSKNRNREGF 199

Query: 692  SVKNYIYDKAKGRMRIRLKVGLAIGVVFLCIGFGSVVLYYMEDLSVIDSFYLSVMSVTTV 871
            S  +YI D  KGRMRIRLKVGLA+GVV LCIG G++VLY++EDL  IDS YL+VMSVTTV
Sbjct: 200  SAADYIIDVKKGRMRIRLKVGLALGVVILCIGIGTLVLYFLEDLDWIDSVYLAVMSVTTV 259

Query: 872  GYGDRAFKSPQGRLFASIWLLFSTLAVARAFLYLAEARIDKRHRRIAKWVLHREITVDDL 1051
            GYGDRAFKS  GRLFA+IWLL STLAVARAFLYLAEARIDKRHRRI+ WVLHR+ITV+DL
Sbjct: 260  GYGDRAFKSLPGRLFAAIWLLVSTLAVARAFLYLAEARIDKRHRRISNWVLHRDITVEDL 319

Query: 1052 VAADLNHNGFI 1084
            +AAD+N+NGFI
Sbjct: 320  LAADMNNNGFI 330



 Score = 24.6 bits (52), Expect(2) = e-102
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 231 TLHRCRSSPAMTVMHD 278
           TLHR +++PAM VM +
Sbjct: 57  TLHRSKTAPAMVVMRE 72


Top