BLASTX nr result

ID: Cnidium21_contig00024384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024384
         (1769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23170.3| unnamed protein product [Vitis vinifera]              812   0.0  
ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   786   0.0  
ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   771   0.0  
ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|2...   759   0.0  
ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   753   0.0  

>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  812 bits (2098), Expect = 0.0
 Identities = 394/561 (70%), Positives = 464/561 (82%), Gaps = 24/561 (4%)
 Frame = -3

Query: 1752 QKRDSSGGNGVGEEDESVCRKKAKQVSQDEVFARNLQAELNNG------SPVRGKS---- 1603
            +K +S     +   + S+ RK+ +QVS+DE FAR LQAE+ N       S V GKS    
Sbjct: 117  KKGNSMDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQ 176

Query: 1602 ------------TETIRYFSPTNDKLPSTFRLMKVKGLPQWANTSAVSIGDVVQGNVQVA 1459
                        +E IR+FS   D LP T+RL++VK LP WANTS+VSI DV+QG+V +A
Sbjct: 177  ASTASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIA 236

Query: 1458 LLSNYMVDIDWLTSACTTLNKVPHVLVIHGEGDGTLEHMKRKKFANWILHKPPLPISYGT 1279
            +LSNYMVDIDWL S+C TL K+PHVLVIHGEGDGTL+HMK+ K  NWILHKPPLPIS+GT
Sbjct: 237  VLSNYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGT 296

Query: 1278 HHSKAMLLVYPQGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKNSNASNKGSGFENDLVD 1099
            HHSKAMLLVYP+GVR+IVHTANLIYVDWNNKSQGLWMQDFPWK     +KG  FENDL+D
Sbjct: 297  HHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLID 356

Query: 1098 YLTALKLPEFSVSLPGLGNCSINASFFRRFDYSSATVRLIASVPGYHSGSSLKKWGHMKL 919
            YL+ LK PEF+ +LP LG+ +IN+SFF++FDYS+A VRLIASVPGYH+GS+LKKWGHMKL
Sbjct: 357  YLSVLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKL 416

Query: 918  RSVLQESTFDQQFRKAPLVYQFSSLGSLDEKWMTELASSMSSGVSEDRKPLGVGEPLIIW 739
             SVLQE  FD++F+K+PL YQFSSLGSLDEKWMTELASSMSSG  +D+ PLG+G+PLIIW
Sbjct: 417  CSVLQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIW 476

Query: 738  PSVEDVRSSLEGYAAGNAIPSPQKNIEKEFLKKYWAKWKARHSGRCHAMPHIKTFARYNG 559
            P+VEDVR SLEGYAAGNAIPSPQKN+EKEFLKKYWAKWKA H+GRC AMPHIKT+ RYNG
Sbjct: 477  PTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNG 536

Query: 558  QNLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPSK-PQGCSFSCTDNGNQVE 382
            QNLAWFLLTS+NLSKAAWGALQKNNSQLMIRSYELGVLFLPS   +G  FSCTDNG+  +
Sbjct: 537  QNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSK 596

Query: 381  GKCESAKTSETERTKLVTLSWEGNRNTE-SSEVITLPVPYELPPQRYSSEDIPWSWDRRY 205
             KC  ++ ++++RTKLVTL+WEGNR+++ SSEVI LPVPYELPP++YSSED+PWSWDRRY
Sbjct: 597  NKCGLSENTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRY 656

Query: 204  SKKDVHGQVWPRQVQLYTTQD 142
             KKDV GQVWPR VQLY++ D
Sbjct: 657  YKKDVCGQVWPRHVQLYSSPD 677


>ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Vitis vinifera]
          Length = 621

 Score =  786 bits (2030), Expect = 0.0
 Identities = 370/494 (74%), Positives = 432/494 (87%), Gaps = 2/494 (0%)
 Frame = -3

Query: 1617 VRGKSTETIRYFSPTNDKLPSTFRLMKVKGLPQWANTSAVSIGDVVQGNVQVALLSNYMV 1438
            +     + IR+FS   D LP T+RL++VK LP WANTS+VSI DV+QG+V +A+LSNYMV
Sbjct: 127  MESNEVKAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLSNYMV 186

Query: 1437 DIDWLTSACTTLNKVPHVLVIHGEGDGTLEHMKRKKFANWILHKPPLPISYGTHHSKAML 1258
            DIDWL S+C TL K+PHVLVIHGEGDGTL+HMK+ K  NWILHKPPLPIS+GTHHSKAML
Sbjct: 187  DIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHSKAML 246

Query: 1257 LVYPQGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKNSNASNKGSGFENDLVDYLTALKL 1078
            LVYP+GVR+IVHTANLIYVDWNNKSQGLWMQDFPWK     +KG  FENDL+DYL+ LK 
Sbjct: 247  LVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLSVLKW 306

Query: 1077 PEFSVSLPGLGNCSINASFFRRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLRSVLQES 898
            PEF+ +LP LG+ +IN+SFF++FDYS+A VRLIASVPGYH+GS+LKKWGHMKL SVLQE 
Sbjct: 307  PEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSVLQEC 366

Query: 897  TFDQQFRKAPLVYQFSSLGSLDEKWMTELASSMSSGVSEDRKPLGVGEPLIIWPSVEDVR 718
             FD++F+K+PL YQFSSLGSLDEKWMTELASSMSSG  +D+ PLG+G+PLIIWP+VEDVR
Sbjct: 367  IFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVR 426

Query: 717  SSLEGYAAGNAIPSPQKNIEKEFLKKYWAKWKARHSGRCHAMPHIKTFARYNGQNLAWFL 538
             SLEGYAAGNAIPSPQKN+EKEFLKKYWAKWKA H+GRC AMPHIKT+ RYNGQNLAWFL
Sbjct: 427  CSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFL 486

Query: 537  LTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPSK-PQGCSFSCTDNGNQVEGKCESAK 361
            LTS+NLSKAAWGALQKNNSQLMIRSYELGVLFLPS   +G  FSCTDNG+  + KC  ++
Sbjct: 487  LTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSE 546

Query: 360  TSETERTKLVTLSWEGNRNTE-SSEVITLPVPYELPPQRYSSEDIPWSWDRRYSKKDVHG 184
             ++++RTKLVTL+WEGNR+++ SSEVI LPVPYELPP++YSSED+PWSWDRRY KKDV G
Sbjct: 547  NTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCG 606

Query: 183  QVWPRQVQLYTTQD 142
            QVWPR VQLY++ D
Sbjct: 607  QVWPRHVQLYSSPD 620


>ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
            gi|223542381|gb|EEF43923.1| tyrosyl-DNA
            phosphodiesterase, putative [Ricinus communis]
          Length = 665

 Score =  771 bits (1992), Expect = 0.0
 Identities = 371/490 (75%), Positives = 418/490 (85%), Gaps = 2/490 (0%)
 Frame = -3

Query: 1605 STETIRYFSPTNDKLPSTFRLMKVKGLPQWANTSAVSIGDVVQGNVQVALLSNYMVDIDW 1426
            S E I  F+  +DKLP TFRLMKVKGLP WANTS VSI DV+QG++  A+LSNYMVDIDW
Sbjct: 176  SEEAIGKFNVNDDKLPLTFRLMKVKGLPAWANTSCVSITDVIQGDIVFAVLSNYMVDIDW 235

Query: 1425 LTSACTTLNKVPHVLVIHGEGDGTLEHMKRKKFANWILHKPPLPISYGTHHSKAMLLVYP 1246
            L SAC  L KVP+VLV+HGEGDGTLEHMKR K ANWILHKPPLPIS+GTHHSKAMLLVYP
Sbjct: 236  LMSACPALAKVPNVLVLHGEGDGTLEHMKRTKPANWILHKPPLPISFGTHHSKAMLLVYP 295

Query: 1245 QGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKNSNASNKGSGFENDLVDYLTALKLPEFS 1066
            +G+RIIVHTANLIYVDWNNK+QGLWMQDFPWK+  +  KG GFENDLVDYL  LK PEF+
Sbjct: 296  RGMRIIVHTANLIYVDWNNKTQGLWMQDFPWKDEKSQTKGCGFENDLVDYLNTLKWPEFT 355

Query: 1065 VSLPGLGNCSINASFFRRFDYSSATVRLIASVPGYHSGSSLKKWGHMKLRSVLQESTFDQ 886
            V LP LG+ +IN SFF++FDYS+A VRLIASVPGYH+G +LKKWGHMKLRSVLQE TF +
Sbjct: 356  VKLPALGSFTINPSFFKKFDYSTAAVRLIASVPGYHTGPNLKKWGHMKLRSVLQECTFRK 415

Query: 885  QFRKAPLVYQFSSLGSLDEKWMTELASSMSSGVSEDRKPLGVGEPLIIWPSVEDVRSSLE 706
            +F+ +PL YQFSSLGSLD KWMTELA+S+SSG+SEDR PLG+GEP IIWP+VEDVR SLE
Sbjct: 416  EFKNSPLAYQFSSLGSLDAKWMTELATSLSSGLSEDRTPLGLGEPRIIWPTVEDVRCSLE 475

Query: 705  GYAAGNAIPSPQKNIEKEFLKKYWAKWKARHSGRCHAMPHIKTFARYNGQNLAWFLLTSS 526
            GYAAGNAIPSP KN+EK+ LKKYW+KWKA HSGRC AMPHIKTF RYNGQ LAW LLTS+
Sbjct: 476  GYAAGNAIPSPLKNVEKDILKKYWSKWKATHSGRCRAMPHIKTFTRYNGQKLAWLLLTSA 535

Query: 525  NLSKAAWGALQKNNSQLMIRSYELGVLFLPS--KPQGCSFSCTDNGNQVEGKCESAKTSE 352
            NLSKAAWGALQKNNSQLMIRSYELGVLFLPS  K  GC  SCTD+G + E +      SE
Sbjct: 536  NLSKAAWGALQKNNSQLMIRSYELGVLFLPSSYKNHGCRLSCTDHGARSEDEYGLLADSE 595

Query: 351  TERTKLVTLSWEGNRNTESSEVITLPVPYELPPQRYSSEDIPWSWDRRYSKKDVHGQVWP 172
              +T+LVTL W+G ++  SS+VI LPVPYELPPQ YSSED+PWSWDRRYSKKDV+GQVWP
Sbjct: 596  EPKTELVTLMWQGPKD-PSSQVIPLPVPYELPPQPYSSEDVPWSWDRRYSKKDVYGQVWP 654

Query: 171  RQVQLYTTQD 142
            R VQLYT+ D
Sbjct: 655  RLVQLYTSLD 664


>ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|222848578|gb|EEE86125.1|
            predicted protein [Populus trichocarpa]
          Length = 599

 Score =  759 bits (1960), Expect = 0.0
 Identities = 365/492 (74%), Positives = 411/492 (83%), Gaps = 2/492 (0%)
 Frame = -3

Query: 1638 ELNNGSPVRGKSTETIRYFSPTNDKLPSTFRLMKVKGLPQWANTSAVSIGDVVQGNVQVA 1459
            E+ +G P R    E IR F  + D+L  TFRL++VK LP WANTS VSI DV++G++ VA
Sbjct: 109  EMESGGPPRNCEEEAIRDFGVSEDELALTFRLLRVKELPAWANTSCVSINDVIKGDILVA 168

Query: 1458 LLSNYMVDIDWLTSACTTLNKVPHVLVIHGEGDGTLEHMKRKKFANWILHKPPLPISYGT 1279
            +LSNYMVD+DWL SAC T+ KVP+V+VIHGEGDGTLEHMKR+K ANWILHKP LPIS+GT
Sbjct: 169  ILSNYMVDMDWLLSACPTIAKVPNVMVIHGEGDGTLEHMKRRKPANWILHKPRLPISFGT 228

Query: 1278 HHSKAMLLVYPQGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKNSNASNKGSGFENDLVD 1099
            HHSKAM LVYP+GVR+IVHTANLIYVDWNNKSQGLWMQDFPWK      KG GFENDLVD
Sbjct: 229  HHSKAMFLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKEEKKPGKGCGFENDLVD 288

Query: 1098 YLTALKLPEFSVSLPGLGNCSINASFFRRFDYSSATVRLIASVPGYHSGSSLKKWGHMKL 919
            YL+ LK PEF+V LP LG+ SINASFF++FDYS A VRLIASVPGYH+G++L+KWGHMKL
Sbjct: 289  YLSMLKWPEFTVKLPNLGSISINASFFKKFDYSHAAVRLIASVPGYHTGANLRKWGHMKL 348

Query: 918  RSVLQESTFDQQFRKAPLVYQFSSLGSLDEKWMTELASSMSSGVSEDRKPLGVGEPLIIW 739
            +SVLQE TFD +F+++PLVYQFSSLGSLDEKWMTELA SMSSG +ED+ PLG+G P IIW
Sbjct: 349  QSVLQECTFDNEFKRSPLVYQFSSLGSLDEKWMTELAISMSSGYAEDKTPLGLGVPQIIW 408

Query: 738  PSVEDVRSSLEGYAAGNAIPSPQKNIEKEFLKKYWAKWKARHSGRCHAMPHIKTFARYNG 559
            P+VEDVR SLEGYAAGNAIP P KN+EK FLKKYWAKWKA HSGRC AMPHIKTF RYNG
Sbjct: 409  PTVEDVRCSLEGYAAGNAIPGPLKNVEKGFLKKYWAKWKASHSGRCRAMPHIKTFTRYNG 468

Query: 558  QNLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPS--KPQGCSFSCTDNGNQV 385
            Q LAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPS  +  G  FSCT NG   
Sbjct: 469  QKLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPSSIRRYGSGFSCTSNGGPS 528

Query: 384  EGKCESAKTSETERTKLVTLSWEGNRNTESSEVITLPVPYELPPQRYSSEDIPWSWDRRY 205
               C S   SE  RT LVTL W+G  ++ +S+VI LPVPYELPP  YSSED+PWSWDRRY
Sbjct: 529  MDNCGSLVDSEELRTTLVTLKWQGTSDS-ASKVIPLPVPYELPPIPYSSEDVPWSWDRRY 587

Query: 204  SKKDVHGQVWPR 169
            SKKDV+GQVWPR
Sbjct: 588  SKKDVYGQVWPR 599


>ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 1 [Glycine
            max]
          Length = 610

 Score =  753 bits (1943), Expect = 0.0
 Identities = 362/499 (72%), Positives = 423/499 (84%), Gaps = 4/499 (0%)
 Frame = -3

Query: 1653 RNLQAELNNGSPVRGKSTETIRYFSPTNDKLPSTFRLMKVKGLPQWANTSAVSIGDVVQG 1474
            RN  A  ++G      S E IR F   +D++PSTFRL+ V+GLP WANTS VSIGDV+QG
Sbjct: 114  RNADARKSSGED---NSVEAIRNFHVPSDQIPSTFRLLHVQGLPPWANTSCVSIGDVIQG 170

Query: 1473 NVQVALLSNYMVDIDWLTSACTTLNKVPHVLVIHGEGDGTLEHMKRKKFANWILHKPPLP 1294
            +++VA+LSNYMVDIDWL  AC  L+KVPHVLVIHGE DG ++++KR K ANWILHKP LP
Sbjct: 171  DIKVAILSNYMVDIDWLVPACPALSKVPHVLVIHGESDGRVDYIKRSKPANWILHKPSLP 230

Query: 1293 ISYGTHHSKAMLLVYPQGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKNSNASNKGSGFE 1114
            IS+GTHHSKAM+L+YPQGVR+IVHTANLIYVDWNNKSQGLWMQDFPWK+ N+ +KGSGFE
Sbjct: 231  ISFGTHHSKAMMLIYPQGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQNSLSKGSGFE 290

Query: 1113 NDLVDYLTALKLPEFSVSLPGLGNCSINASFFRRFDYSSATVRLIASVPGYHSGSSLKKW 934
            NDLV+YL+ LK PEFSV+LP LG+ SI  SFFR+FDYS A VRLIASVPGYHSGSSLKKW
Sbjct: 291  NDLVEYLSVLKWPEFSVNLPFLGSVSICPSFFRKFDYSDARVRLIASVPGYHSGSSLKKW 350

Query: 933  GHMKLRSVLQESTFDQQFRKAPLVYQFSSLGSLDEKWMTELASSMSSGVSEDRKPLGVGE 754
            GHMKLRS+LQE TFD++F+K+PLVYQFSSLGSLDEKWMTELASSMS+G+SED+ PLG+GE
Sbjct: 351  GHMKLRSLLQECTFDEEFKKSPLVYQFSSLGSLDEKWMTELASSMSAGLSEDKTPLGMGE 410

Query: 753  PLIIWPSVEDVRSSLEGYAAGNAIPSPQKNIEKEFLKKYWAKWKARHSGRCHAMPHIKTF 574
            P IIWP+VEDVR SLEGYAAGNA+PSP KN+EK FLKKYWAKWKA H+GRC AMPHIKTF
Sbjct: 411  PQIIWPTVEDVRCSLEGYAAGNAVPSPLKNVEKTFLKKYWAKWKADHTGRCRAMPHIKTF 470

Query: 573  ARYNGQNLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPS--KPQGCSFSCTD 400
            ARY  Q+LAWFLLTS+NLSKAAWGALQKNN+QLMIRSYELGVLFLPS  K     FSCT 
Sbjct: 471  ARYKNQSLAWFLLTSANLSKAAWGALQKNNTQLMIRSYELGVLFLPSLFKRHESVFSCTS 530

Query: 399  NGNQVEGKCESAKTSETERTKLVTLSW--EGNRNTESSEVITLPVPYELPPQRYSSEDIP 226
            N    E KC + ++SE ++TKLVTL+   + + ++ S  +I LP+PYELPP  YSS+DIP
Sbjct: 531  NVTVSEDKCPARESSEMKKTKLVTLTGIKKESMHSSSEVIIPLPLPYELPPLPYSSQDIP 590

Query: 225  WSWDRRYSKKDVHGQVWPR 169
            WSWDR+Y+KKDV+G VWPR
Sbjct: 591  WSWDRQYNKKDVYGHVWPR 609


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