BLASTX nr result

ID: Cnidium21_contig00024382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024382
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...   191   2e-46
emb|CBI23148.3| unnamed protein product [Vitis vinifera]              191   2e-46
ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein A...   191   2e-46
ref|XP_002509961.1| ring finger protein, putative [Ricinus commu...   190   4e-46
ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45

>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score =  191 bits (486), Expect = 2e-46
 Identities = 120/318 (37%), Positives = 163/318 (51%), Gaps = 20/318 (6%)
 Frame = +2

Query: 134  CEPVTCKPTGPVIRFPFRLIGKQPRQCGYPGFDLSCNNNSQLLLHLPFAGDFVVTHINYV 313
            CE  +C  +   IRFPFRL   QP  CGYPGFDLSC+   Q +L LP +G+F V  I+Y 
Sbjct: 8    CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 66

Query: 314  THNIFFK-PEFCPPNTIQAFSPVVSPFVGELLAEYTFFNCSSDRFFPIGEPFETLECFSK 490
            T  I+   P+ C P  I + +   S F G     Y+FF CS+D         +++ C S 
Sbjct: 67   TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 120

Query: 491  MNYTVLVVESR--------LFDGVGDRRLPASC-------RNDTVAGAIPVGFRWDLPVC 625
             NYTV   +S         + D +    +PA          +D  +  +     W  P C
Sbjct: 121  DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL---LSWGAPRC 177

Query: 626  GKCEVENRTCGFKNVETLELGCSGPSKSGLSNAGKYGIIVGVGMPGXXXXX----FIANY 793
            G CE+E   CGF++  +LE+GC    K GL    +Y I VGVG+P          F+   
Sbjct: 178  GDCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGR 237

Query: 794  AKKKMNHRTHIEQHNAPSLPTTTIAPQPPTFVTGLDKLTIDSYPMTVLGASKRLPKPSDS 973
             K     R  I +       T+ + PQP T V GLD  TI+SYP  VLG S+RLPKP D+
Sbjct: 238  VKAFGGRRRPIAEF------TSMVTPQP-TAVMGLDGPTIESYPKVVLGESRRLPKPDDN 290

Query: 974  TCAICLSEYQPKDTIRTV 1027
            TC+ICLSEY+PK+T++ +
Sbjct: 291  TCSICLSEYRPKETLKII 308



 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
 Frame = +2

Query: 161  GPVIRFPFRLIGKQPRQCGYPGFDLSCNNNSQLLLHLPFAGDFVVTHINYVTHNIFFK-P 337
            GP+IRFPFRL   QP  CGYPGF+LSC    Q +L LP++   +V  I+Y T  I  + P
Sbjct: 492  GPLIRFPFRL-KDQPDHCGYPGFELSCTEKKQTVLDLPYSVKLLVKKIDYTTQEIRVQDP 550

Query: 338  EFCPPNTIQAFSPVVSPFVGEL------LAEYTFFNCSSDRFFPIGEPFETLECFSKMNY 499
            + C P  +Q      SPF  EL        ++TF NCS ++         ++ C S    
Sbjct: 551  DNCLPRQLQNLDLAGSPFQFELENSWDYFRDFTFVNCSVNK-SANQYNLRSIPCLSVPGN 609

Query: 500  TVLVVESRLFDGVGDRRLPASCRN--------DTVAGAIPVGFRWDLPVCGKCEVENRTC 655
             V  + S     +GD  L +SCR              + P+   W   +CGKCE E + C
Sbjct: 610  LVYAILSNA--DLGDFDL-SSCRKIYNISLPYRMSNNSFPMS--WSKSICGKCEAEGKKC 664

Query: 656  GFKNVETLEL-GCSGPSKSGLSNAGKYGIIVGVGMPGXXXXXFIANYAKKKMNHRTHIEQ 832
              K+  T  +  C    K+G S  G + +++ V         ++    K + +H+  IE+
Sbjct: 665  RLKSNNTEPVTECIEKPKTG-SIVGSFLLVLVV-----IVLYYVYTKNKSRKDHQMKIEK 718


>emb|CBI23148.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  191 bits (486), Expect = 2e-46
 Identities = 120/318 (37%), Positives = 163/318 (51%), Gaps = 20/318 (6%)
 Frame = +2

Query: 134  CEPVTCKPTGPVIRFPFRLIGKQPRQCGYPGFDLSCNNNSQLLLHLPFAGDFVVTHINYV 313
            CE  +C  +   IRFPFRL   QP  CGYPGFDLSC+   Q +L LP +G+F V  I+Y 
Sbjct: 37   CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 95

Query: 314  THNIFFK-PEFCPPNTIQAFSPVVSPFVGELLAEYTFFNCSSDRFFPIGEPFETLECFSK 490
            T  I+   P+ C P  I + +   S F G     Y+FF CS+D         +++ C S 
Sbjct: 96   TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 149

Query: 491  MNYTVLVVESR--------LFDGVGDRRLPASC-------RNDTVAGAIPVGFRWDLPVC 625
             NYTV   +S         + D +    +PA          +D  +  +     W  P C
Sbjct: 150  DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL---LSWGAPRC 206

Query: 626  GKCEVENRTCGFKNVETLELGCSGPSKSGLSNAGKYGIIVGVGMPGXXXXX----FIANY 793
            G CE+E   CGF++  +LE+GC    K GL    +Y I VGVG+P          F+   
Sbjct: 207  GDCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGR 266

Query: 794  AKKKMNHRTHIEQHNAPSLPTTTIAPQPPTFVTGLDKLTIDSYPMTVLGASKRLPKPSDS 973
             K     R  I +       T+ + PQP T V GLD  TI+SYP  VLG S+RLPKP D+
Sbjct: 267  VKAFGGRRRPIAEF------TSMVTPQP-TAVMGLDGPTIESYPKVVLGESRRLPKPDDN 319

Query: 974  TCAICLSEYQPKDTIRTV 1027
            TC+ICLSEY+PK+T++ +
Sbjct: 320  TCSICLSEYRPKETLKII 337


>ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
            gi|297742332|emb|CBI34481.3| unnamed protein product
            [Vitis vinifera]
          Length = 386

 Score =  191 bits (485), Expect = 2e-46
 Identities = 123/306 (40%), Positives = 164/306 (53%), Gaps = 13/306 (4%)
 Frame = +2

Query: 149  CKPTGPVIRFPFRLIGKQPRQCGYP-GFDLSCNNNSQLLLHLPFAGDFVVTHINYVTHNI 325
            C   GP + FPF + G     CG+  GF L+CNN SQ +L LP AGDF+V  I Y T  I
Sbjct: 27   CSLNGPEVHFPFYINGSSSCGCGFSQGFGLTCNN-SQPVLKLPSAGDFIVQSIRYDTQRI 85

Query: 326  FFK-PEFCPPNTIQAFSPVVSPF--VGELLAEYTFFNCSSDRFFPIGEPFE--TLECFSK 490
              K P+ C P  +  FS   SPF             +C+ D      E FE  + +C ++
Sbjct: 86   RIKDPDNCIPKRLLNFSLSDSPFQEAPRRQRNLRLLSCNMDNSTEFSEEFELWSNDCVNE 145

Query: 491  MNYTVLVV-ESRLFDGVGDRRLPASCRN-DTVAGAIP----VGFRWDLPVCGKCEVENRT 652
             N+T++ + ESR  +      L + C+   TV  ++     +  +WD P CG CE E  T
Sbjct: 146  TNHTIVALDESRSTEASFSYYLHSQCKEIKTVLVSVSRFGSLELKWDEPNCGACEQEGIT 205

Query: 653  CGFKNVETLELGCSGPSKSGLSNAGKYGIIVGVGMPGXXXXXFIANYAKKKMNHRTHIEQ 832
            CGFK     E+  S  S  GL  + KYG+I+G+G+PG      I+     ++  RT+  +
Sbjct: 206  CGFKRGTDSEIESSKASSHGLPRSAKYGLIIGIGIPGLLCLIGISCCICGRI--RTYARR 263

Query: 833  -HNAPSLPTTTIAPQPPTFVTGLDKLTIDSYPMTVLGASKRLPKPSDSTCAICLSEYQPK 1009
             H + +    +I P P   V GLD  TI+SYP TVLG S RLPKPSD TC ICLSEYQPK
Sbjct: 264  RHRSDTDFAISIGPLPAVVVMGLDGPTIESYPKTVLGESMRLPKPSDGTCPICLSEYQPK 323

Query: 1010 DTIRTV 1027
            DTIRT+
Sbjct: 324  DTIRTI 329


>ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
            gi|223549860|gb|EEF51348.1| ring finger protein, putative
            [Ricinus communis]
          Length = 392

 Score =  190 bits (483), Expect = 4e-46
 Identities = 116/311 (37%), Positives = 162/311 (52%), Gaps = 17/311 (5%)
 Frame = +2

Query: 146  TCKPTGPVIRFPFRLIGKQPRQCGYPGFDLSCNNNSQLLLHLPFAGDFVVTHINYVTHNI 325
            +C  TG  IRFPF L G +   C YPGF+LSC+   Q +L LP AG+F+V  I+Y    I
Sbjct: 25   SCSRTGQEIRFPFGLTGGR---CSYPGFNLSCSAGDQTILALPRAGNFIVQFIDYSAQQI 81

Query: 326  FFK-PEFC-PPNTIQAFSPVVSPFVGELLAEYTFFNCSSD---RFFPIGEPFETLECFSK 490
            + + P  C     ++ FS   SPF+ E+   +TF NCSS+    F P       ++C S 
Sbjct: 82   YIRDPGNCIAERFLKNFSLSGSPFIAEIYRSFTFLNCSSNFSASFLPPSS--RKVKCLSS 139

Query: 491  MNYTVLVVESRLFDGVGDRRLPASCRNDTVAGAIPVGF----------RWDLPVCGKCEV 640
             N TV+ + +    G      P SC        +PV +           W  P C  CE 
Sbjct: 140  ENSTVVALLNSYDQGYEPSSFP-SCTVMAKRVEVPVSWYRWAEGDASLTWTKPDCRSCEE 198

Query: 641  ENRTCGFKNVETLELGCSG--PSKSGLSNAGKYGIIVGVGMPGXXXXXFIANYAKKKMNH 814
               TCGFK    L++GC     SK  L  + KYGII+G+G+PG      +  Y   ++  
Sbjct: 199  RGGTCGFKGDTGLDIGCFDLPRSKRALPRSAKYGIIIGIGIPGLLCIIGLGCYVAGRVG- 257

Query: 815  RTHIEQHNAPSLPTTTIAPQPPTFVTGLDKLTIDSYPMTVLGASKRLPKPSDSTCAICLS 994
             T+    ++ +    T   QP   VTG+D  T++ YP T+LG S+RLPKP+D+TC ICL 
Sbjct: 258  -TYRRSLHSSTALNATFPRQPSMAVTGIDGATLELYPKTLLGESRRLPKPNDNTCPICLC 316

Query: 995  EYQPKDTIRTV 1027
            EYQPK+T+RT+
Sbjct: 317  EYQPKETLRTI 327


>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  188 bits (478), Expect = 2e-45
 Identities = 117/302 (38%), Positives = 166/302 (54%), Gaps = 16/302 (5%)
 Frame = +2

Query: 170  IRFPFRLIGKQPRQCGYPGFDLSCNNNSQLL-LHLPFAGDFVVTHINYVTHNIFFK-PEF 343
            +RFPF   G    +C YPGF LSC++ +Q++ L LP  G+F V +INY +  +    P+ 
Sbjct: 34   VRFPF---GFDNNRCSYPGFKLSCDSKTQIITLDLPNIGNFTVRNINYGSQTVTITDPQN 90

Query: 344  CPPNTI--QAFSPVVSPF-VGELLAEY-TFFNCSSDRFFPIGEPFETLECFSKMNYTVLV 511
            C        +F    SPF + E    + TF NCS++    I      + C S  N+TV+ 
Sbjct: 91   CLAKKFIDSSFDLSGSPFNIPEYYNHFFTFLNCSTNSTTVISG-IRRVNCLSNENFTVVT 149

Query: 512  VESRLFDGVGDRRLPASCRNDTVAGAIPVGFRW---------DLPVCGKCEVENRTCGFK 664
            + + +++   D  +P  C       A+P  +RW         + P C  CEV+  TC FK
Sbjct: 150  LPTNIYESFPDF-MPPFCTELKKRVAVPPWYRWSDSETRLIWNEPYCLPCEVDGGTCQFK 208

Query: 665  NVETLELGCSGPSKSGLSNAGKYGIIVGVGMPGXXXXXFIANYAKKKMNHRTHIEQHNAP 844
                L + C+G SK  L  + KYGII+G G+PG      I +Y   ++  R+     N P
Sbjct: 209  GNTGLTIDCNGRSKGPLPRSAKYGIIIGAGIPGLLCIIGIVSYVFGRLKARS---SGNEP 265

Query: 845  SLP-TTTIAPQPPTFVTGLDKLTIDSYPMTVLGASKRLPKPSDSTCAICLSEYQPKDTIR 1021
            ++  +T++APQP   VTGLD  TI+SYP T LG S RLPKP+D+TC ICLSEYQPKDT+R
Sbjct: 266  TMEMSTSVAPQPCVVVTGLDGPTIESYPKTQLGDSGRLPKPNDNTCPICLSEYQPKDTLR 325

Query: 1022 TV 1027
            T+
Sbjct: 326  TI 327


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