BLASTX nr result

ID: Cnidium21_contig00024345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024345
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317540.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002317545.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002317549.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002317547.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002528881.1| conserved hypothetical protein [Ricinus comm...   116   2e-24

>ref|XP_002317540.1| predicted protein [Populus trichocarpa] gi|222860605|gb|EEE98152.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/95 (60%), Positives = 74/95 (77%)
 Frame = -3

Query: 287 SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
           SD +SFGV+VLEI+SGN+ RGF + D+NLNLLG AWK++ EG  L+LV E+  E+CN SE
Sbjct: 691 SDVFSFGVLVLEILSGNRNRGFCHPDHNLNLLGHAWKLFTEGRPLELVSESIVETCNLSE 750

Query: 107 VLRAVQIGLLCVQPYPKDRPNMRFVVSMLGNDNEL 3
            LR + +GLLCVQ  P+DRP M +VV MLGN++ L
Sbjct: 751 ALRLIHVGLLCVQENPEDRPTMSYVVLMLGNEDAL 785


>ref|XP_002317545.1| predicted protein [Populus trichocarpa] gi|222860610|gb|EEE98157.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/95 (57%), Positives = 76/95 (80%)
 Frame = -3

Query: 287 SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
           SD +SFGV+VLE VSGN+ RGF++ D+ LNLLG AW ++ EG  L+L+ ++  E+CN SE
Sbjct: 687 SDVFSFGVLVLETVSGNRNRGFYHPDHQLNLLGHAWTLFNEGRPLELIAKSTIETCNLSE 746

Query: 107 VLRAVQIGLLCVQPYPKDRPNMRFVVSMLGNDNEL 3
           VLR +Q+GLLCVQ  P+DRP++ +VV MLGN++EL
Sbjct: 747 VLRVIQVGLLCVQESPEDRPSISYVVLMLGNEDEL 781


>ref|XP_002317549.1| predicted protein [Populus trichocarpa] gi|222860614|gb|EEE98161.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/95 (58%), Positives = 74/95 (77%)
 Frame = -3

Query: 287 SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
           SD +SFGV+VLEI+SGNK RGF + D+ LNLLG AW+++ EG  L+L+ E+  ESCN  E
Sbjct: 646 SDVFSFGVLVLEIISGNKNRGFSHPDHQLNLLGHAWRLFIEGKPLELISESIIESCNLFE 705

Query: 107 VLRAVQIGLLCVQPYPKDRPNMRFVVSMLGNDNEL 3
           VLR++ +GLLCVQ  P DRP+M +VV MLGN++ L
Sbjct: 706 VLRSIHVGLLCVQENPVDRPSMSYVVLMLGNEDAL 740


>ref|XP_002317547.1| predicted protein [Populus trichocarpa] gi|222860612|gb|EEE98159.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/95 (56%), Positives = 76/95 (80%)
 Frame = -3

Query: 287 SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
           SD +SFGV+VLE VSGN+ RGF+++D+ LNLLG AW ++ EG   +L+ E+  E+CN SE
Sbjct: 641 SDVFSFGVLVLETVSGNRNRGFYHSDHQLNLLGHAWTLFNEGRPSELIAESTIETCNLSE 700

Query: 107 VLRAVQIGLLCVQPYPKDRPNMRFVVSMLGNDNEL 3
           VLR +Q+GLLCVQ  P+DRP++ +VV MLGN+++L
Sbjct: 701 VLRVIQLGLLCVQESPEDRPSISYVVLMLGNEDKL 735


>ref|XP_002528881.1| conserved hypothetical protein [Ricinus communis]
            gi|223531680|gb|EEF33505.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2428

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/90 (62%), Positives = 69/90 (76%)
 Frame = -3

Query: 287  SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
            SD +SFGV++LEIVSG K R F + D+ LNLLG AW ++KEG  L+L+D   KESCN SE
Sbjct: 1510 SDVFSFGVLILEIVSGKKNRRFSHPDHQLNLLGHAWNLFKEGRYLELIDALIKESCNLSE 1569

Query: 107  VLRAVQIGLLCVQPYPKDRPNMRFVVSMLG 18
            VLR+V +GLLCVQ  P+DRP+M  VV MLG
Sbjct: 1570 VLRSVHVGLLCVQHAPEDRPSMSSVVLMLG 1599



 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/95 (55%), Positives = 73/95 (76%)
 Frame = -3

Query: 287 SDAYSFGVVVLEIVSGNKIRGFFNTDNNLNLLGQAWKVYKEGNILDLVDEAFKESCNKSE 108
           SD +SFGV+VLEIVSG + RGF + +++LNLLG AWK++K G   +L+  +  +SC +SE
Sbjct: 692 SDVFSFGVMVLEIVSGKRNRGFCHPEHHLNLLGHAWKLHKAGRTFELIAASVIDSCYESE 751

Query: 107 VLRAVQIGLLCVQPYPKDRPNMRFVVSMLGNDNEL 3
           VLR++QIGLLCVQ  P+DRP+M  VV MLG++  L
Sbjct: 752 VLRSIQIGLLCVQRSPEDRPSMSNVVLMLGSEGTL 786



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233  IRGFFNTDNNLNLLGQ-AWKVYKEGNILDLVDEAFKESCNKSEVLRAVQIGLLCVQPYPK 57
            I G F+  ++    G  AWK++KEG  L+L+D    ESCN SEVLR++Q+GLLCVQ  P+
Sbjct: 2311 IDGLFSVKSDTFSFGVLAWKLFKEGRYLELIDALIMESCNLSEVLRSIQVGLLCVQHSPE 2370

Query: 56   DRPNMRFVVSMLGNDNEL 3
            DRP+M  VV ML  +  L
Sbjct: 2371 DRPSMSSVVLMLSGEGAL 2388


Top