BLASTX nr result
ID: Cnidium21_contig00024340
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024340 (611 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th... 288 4e-76 ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab... 288 4e-76 ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46... 284 8e-75 emb|CBI20856.3| unnamed protein product [Vitis vinifera] 284 8e-75 ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative ... 284 1e-74 >ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|79314404|ref|NP_001030817.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|79314427|ref|NP_001030818.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|79314448|ref|NP_001030819.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|145332769|ref|NP_001078250.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|334185757|ref|NP_001190019.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis thaliana] gi|27808554|gb|AAO24557.1| At3g46210 [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1| hypothetical protein [Arabidopsis thaliana] gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210 [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|332644609|gb|AEE78130.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|332644611|gb|AEE78132.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1| exosome complex component RRP46 [Arabidopsis thaliana] gi|332644613|gb|AEE78134.1| exosome complex component RRP46 [Arabidopsis thaliana] Length = 239 Score = 288 bits (738), Expect = 4e-76 Identities = 133/159 (83%), Positives = 150/159 (94%) Frame = -2 Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299 M+I+R DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGP+AGT KNEN EKA Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60 Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119 CFEVIWKPK+GQIGK EKEYEMILKRT+QSIC+ VNPNTTTS+IIQVVHDDG+LLPCAI Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120 Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2 NAAC ALVDAGIP+KHLAVAICCC+A+NG+++LDPNKLE Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLE 159 >ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata] Length = 242 Score = 288 bits (738), Expect = 4e-76 Identities = 133/159 (83%), Positives = 149/159 (93%) Frame = -2 Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299 M+I+R DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGP+AGT KNEN EKA Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60 Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119 CFEVIWKPKTGQIGK EKEYEMI+KRT+QSIC+ VNPNTTTS+IIQVVHDDG+LLPCAI Sbjct: 61 CFEVIWKPKTGQIGKVEKEYEMIMKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120 Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2 NAAC ALVDAGIP+KHLAVAICCC+A NG+++LDPNKLE Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLADNGYLVLDPNKLE 159 >ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis vinifera] Length = 245 Score = 284 bits (727), Expect = 8e-75 Identities = 134/159 (84%), Positives = 148/159 (93%) Frame = -2 Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299 M+I R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGP+AGT KNENPEKA Sbjct: 3 MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 62 Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119 C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI Sbjct: 63 CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 122 Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2 NAAC ALVDA IPLKHLAVAICCC+ ++G+VILDP K+E Sbjct: 123 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVE 161 >emb|CBI20856.3| unnamed protein product [Vitis vinifera] Length = 243 Score = 284 bits (727), Expect = 8e-75 Identities = 134/159 (84%), Positives = 148/159 (93%) Frame = -2 Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299 M+I R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGP+AGT KNENPEKA Sbjct: 1 MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60 Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119 C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI Sbjct: 61 CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 120 Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2 NAAC ALVDA IPLKHLAVAICCC+ ++G+VILDP K+E Sbjct: 121 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVE 159 >ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative [Ricinus communis] gi|223544318|gb|EEF45839.1| Exosome complex exonuclease RRP46, putative [Ricinus communis] Length = 211 Score = 284 bits (726), Expect = 1e-74 Identities = 132/159 (83%), Positives = 147/159 (92%) Frame = -2 Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299 MDI+R DGRT NQLRPLACSRNVLNRAHGSASW QG+TKVLAAVYGP+ GT KNENPEKA Sbjct: 1 MDIDRDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKA 60 Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119 C EVIWKPKTGQIGK EKEYEMILKRT+Q+IC+ +NPNTTTS+I+QVVHDDGALL CAI Sbjct: 61 CIEVIWKPKTGQIGKVEKEYEMILKRTLQTICVLTINPNTTTSVIVQVVHDDGALLTCAI 120 Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2 NAAC ALVDAGIP+KHLAVAICCC++++G+VILDP KLE Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLSESGYVILDPTKLE 159