BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024340
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis th...   288   4e-76
ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...   288   4e-76
ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   284   8e-75
emb|CBI20856.3| unnamed protein product [Vitis vinifera]              284   8e-75
ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative ...   284   1e-74

>ref|NP_190207.1| exosome complex component RRP46 [Arabidopsis thaliana]
           gi|79314404|ref|NP_001030817.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314427|ref|NP_001030818.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|79314448|ref|NP_001030819.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|145332769|ref|NP_001078250.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|334185757|ref|NP_001190019.1| exosome complex
           component RRP46 [Arabidopsis thaliana]
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana] gi|110736314|dbj|BAF00127.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
           thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
           [Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644609|gb|AEE78130.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644611|gb|AEE78132.1| exosome complex component
           RRP46 [Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
           exosome complex component RRP46 [Arabidopsis thaliana]
           gi|332644613|gb|AEE78134.1| exosome complex component
           RRP46 [Arabidopsis thaliana]
          Length = 239

 Score =  288 bits (738), Expect = 4e-76
 Identities = 133/159 (83%), Positives = 150/159 (94%)
 Frame = -2

Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299
           M+I+R DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGP+AGT KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119
           CFEVIWKPK+GQIGK EKEYEMILKRT+QSIC+  VNPNTTTS+IIQVVHDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2
           NAAC ALVDAGIP+KHLAVAICCC+A+NG+++LDPNKLE
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLE 159


>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  288 bits (738), Expect = 4e-76
 Identities = 133/159 (83%), Positives = 149/159 (93%)
 Frame = -2

Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299
           M+I+R DGRT NQLRPLACSRN+L+R HGSASWSQG+TKVLAAVYGP+AGT KNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119
           CFEVIWKPKTGQIGK EKEYEMI+KRT+QSIC+  VNPNTTTS+IIQVVHDDG+LLPCAI
Sbjct: 61  CFEVIWKPKTGQIGKVEKEYEMIMKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2
           NAAC ALVDAGIP+KHLAVAICCC+A NG+++LDPNKLE
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLADNGYLVLDPNKLE 159


>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  284 bits (727), Expect = 8e-75
 Identities = 134/159 (84%), Positives = 148/159 (93%)
 Frame = -2

Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299
           M+I R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGP+AGT KNENPEKA
Sbjct: 3   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 62

Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119
           C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI
Sbjct: 63  CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 122

Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2
           NAAC ALVDA IPLKHLAVAICCC+ ++G+VILDP K+E
Sbjct: 123 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVE 161


>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  284 bits (727), Expect = 8e-75
 Identities = 134/159 (84%), Positives = 148/159 (93%)
 Frame = -2

Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299
           M+I R DGRTANQLRPLACSRN+LNRAHGSASWSQG+TKVLAAVYGP+AGT KNENPEKA
Sbjct: 1   MEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119
           C EV+WKPKTGQIGK EKEYE+ILKRT++SICL N+NPNTTTSIIIQVV DDGALLPCAI
Sbjct: 61  CIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPCAI 120

Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2
           NAAC ALVDA IPLKHLAVAICCC+ ++G+VILDP K+E
Sbjct: 121 NAACAALVDAAIPLKHLAVAICCCLTESGYVILDPTKVE 159


>ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative [Ricinus communis]
           gi|223544318|gb|EEF45839.1| Exosome complex exonuclease
           RRP46, putative [Ricinus communis]
          Length = 211

 Score =  284 bits (726), Expect = 1e-74
 Identities = 132/159 (83%), Positives = 147/159 (92%)
 Frame = -2

Query: 478 MDIERADGRTANQLRPLACSRNVLNRAHGSASWSQGETKVLAAVYGPRAGTNKNENPEKA 299
           MDI+R DGRT NQLRPLACSRNVLNRAHGSASW QG+TKVLAAVYGP+ GT KNENPEKA
Sbjct: 1   MDIDRDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKA 60

Query: 298 CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICLSNVNPNTTTSIIIQVVHDDGALLPCAI 119
           C EVIWKPKTGQIGK EKEYEMILKRT+Q+IC+  +NPNTTTS+I+QVVHDDGALL CAI
Sbjct: 61  CIEVIWKPKTGQIGKVEKEYEMILKRTLQTICVLTINPNTTTSVIVQVVHDDGALLTCAI 120

Query: 118 NAACVALVDAGIPLKHLAVAICCCVAQNGHVILDPNKLE 2
           NAAC ALVDAGIP+KHLAVAICCC++++G+VILDP KLE
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLSESGYVILDPTKLE 159