BLASTX nr result

ID: Cnidium21_contig00024336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024336
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...   371   e-100
ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99
ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99
ref|XP_002528427.1| Rop guanine nucleotide exchange factor, puta...   352   1e-94
ref|XP_003537755.1| PREDICTED: rop guanine nucleotide exchange f...   348   1e-93

>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera] gi|297744497|emb|CBI37759.3| unnamed protein
           product [Vitis vinifera]
          Length = 587

 Score =  371 bits (953), Expect = e-100
 Identities = 197/286 (68%), Positives = 216/286 (75%), Gaps = 11/286 (3%)
 Frame = -2

Query: 827 MASVSSEDCSDD---RCGXXXXXXXXXXXXXXXXXXXXXXXXXSISAE---SPLGRRGFA 666
           M SVSSE+  DD   RCG                           S+    SPL  R   
Sbjct: 1   MGSVSSEEGVDDQSDRCGSYSLSADVSESESCSSFSCRRYDGEGASSSMTSSPLACRPVV 60

Query: 665 GNSGFPA--PVMFPVVGGKDVVVWEDRTQKSEADLSEVLMIKERFAKLLLGEDMSGGGKG 492
           GNS FP   P+M PV+GG+DVVVW ++ +K E DLSE  M+KERFAKLLLGEDMSGGGKG
Sbjct: 61  GNSSFPVGPPLMLPVIGGRDVVVWGEKPEKRETDLSEAEMMKERFAKLLLGEDMSGGGKG 120

Query: 491 VCTALAISNAITNLSATVFGELWRLEPLAHQKKAMWRREMECLLWVSDSIVELVPSIQQF 312
           VCTALAISNAITNLSATVFGELWRLEPLA QKKAMW REME LL VSDSIVELVPSIQQF
Sbjct: 121 VCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWCREMEWLLCVSDSIVELVPSIQQF 180

Query: 311 PGGGSYEVMATQPRSDLYINLPALKKLDAMLISILDEFHDLEFWYVERGMDVAEG---DV 141
           PGGG+YEVMAT+PRSDLY+NLPALKKLDAML+S+LD F + EFWYV+RG+ VAE    D 
Sbjct: 181 PGGGTYEVMATRPRSDLYMNLPALKKLDAMLLSMLDGFCETEFWYVDRGIIVAEADNHDA 240

Query: 140 YPSAFSSGRPSVRQEEKWWLPCPKVPSKGLSEDARKRLQQCRDCTN 3
           YP + SSGRPS+RQEEKWWLPCPKVP  GLSEDARKRLQQCRDCTN
Sbjct: 241 YPLSASSGRPSIRQEEKWWLPCPKVPPNGLSEDARKRLQQCRDCTN 286


>ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  366 bits (940), Expect = 4e-99
 Identities = 181/238 (76%), Positives = 202/238 (84%), Gaps = 4/238 (1%)
 Frame = -2

Query: 704 ISAESPLGRRGFAGNSGFPAPVMFPVVGGKDVVVWEDRTQK-SEADLSEVLMIKERFAKL 528
           +S+      R   G   FPAPVM PV+GGKDVVVW+ + +K  +ADLSEV M+KERFAKL
Sbjct: 50  VSSSMTSSPRPLPGGFCFPAPVMVPVIGGKDVVVWDSKNEKRGDADLSEVEMMKERFAKL 109

Query: 527 LLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAHQKKAMWRREMECLLWVSD 348
           LLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLA QKK+MW+REME LL VSD
Sbjct: 110 LLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLALQKKSMWKREMEWLLCVSD 169

Query: 347 SIVELVPSIQQFPGGGSYEVMATQPRSDLYINLPALKKLDAMLISILDEFHDLEFWYVER 168
           SIVELVPSIQQFPGGG+YEVMAT+PRSDLY+NLPALKKLDAMLI++LD F + EFWY +R
Sbjct: 170 SIVELVPSIQQFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLITMLDGFSETEFWYADR 229

Query: 167 GMDVAEG---DVYPSAFSSGRPSVRQEEKWWLPCPKVPSKGLSEDARKRLQQCRDCTN 3
           G+ V +G   D YPS  S GRPS+RQE+KWWLPCPKVP  GLSEDARKRLQQCRDCTN
Sbjct: 230 GIVVGDGGDCDTYPSGISGGRPSIRQEDKWWLPCPKVPPDGLSEDARKRLQQCRDCTN 287


>ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  366 bits (939), Expect = 6e-99
 Identities = 182/229 (79%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
 Frame = -2

Query: 677 RGFAGNSGFPAPVMFPVVGGKDVVVWEDRTQKS-EADLSEVLMIKERFAKLLLGEDMSGG 501
           R  AG   FPAPVM PV+GGKDVVVW  + +K  E DLSEV M+KERFAKLLLGEDMSGG
Sbjct: 59  RPVAGGFCFPAPVMVPVIGGKDVVVWGSKNEKRRETDLSEVEMMKERFAKLLLGEDMSGG 118

Query: 500 GKGVCTALAISNAITNLSATVFGELWRLEPLAHQKKAMWRREMECLLWVSDSIVELVPSI 321
           GKGVCTALAISNAITNLSATVFGELWRLEPL  QKK+MW+REME LL VSDSIVELVPS+
Sbjct: 119 GKGVCTALAISNAITNLSATVFGELWRLEPLLPQKKSMWKREMEWLLCVSDSIVELVPSM 178

Query: 320 QQFPGGGSYEVMATQPRSDLYINLPALKKLDAMLISILDEFHDLEFWYVERGMDVAEG-- 147
           QQFPGGG+YEVMAT+PRSDLY+NLPALKKLDAMLIS+LD F + EFWYV+RG+ VA+G  
Sbjct: 179 QQFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIVVADGGD 238

Query: 146 -DVYPSAFSSGRPSVRQEEKWWLPCPKVPSKGLSEDARKRLQQCRDCTN 3
            D YPS  S GRPS+RQEEKWWLPCPKVP  GLS+DARKRLQQCRDCTN
Sbjct: 239 CDAYPSGISGGRPSIRQEEKWWLPCPKVPPNGLSDDARKRLQQCRDCTN 287


>ref|XP_002528427.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223532163|gb|EEF33969.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 580

 Score =  352 bits (902), Expect = 1e-94
 Identities = 171/220 (77%), Positives = 195/220 (88%), Gaps = 3/220 (1%)
 Frame = -2

Query: 653 FPAPVMFPVVGGKDVVVWEDRTQKSEADLSEVLMIKERFAKLLLGEDMSGGGKGVCTALA 474
           F  P++ P    KD+++W+ + +K + DLSEV M+KERFAKLLLGEDMSGGGKGVCTALA
Sbjct: 74  FQTPLLLP----KDLLLWDIKPEKRDTDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALA 129

Query: 473 ISNAITNLSATVFGELWRLEPLAHQKKAMWRREMECLLWVSDSIVELVPSIQQFPGGGSY 294
           ISNAITNLSATVFGELWRLEPLA QKK+MWRREME LL VSDSIVELVPS+QQFPGGG+Y
Sbjct: 130 ISNAITNLSATVFGELWRLEPLAPQKKSMWRREMEWLLCVSDSIVELVPSVQQFPGGGTY 189

Query: 293 EVMATQPRSDLYINLPALKKLDAMLISILDEFHDLEFWYVERGMDVAEG---DVYPSAFS 123
           E+MA QPRSDLY+NLPALKKLDAMLIS+LD F + EFWYV+RG+ +A+G   DVYPS FS
Sbjct: 190 EIMAAQPRSDLYVNLPALKKLDAMLISMLDGFCETEFWYVDRGIILADGADNDVYPSGFS 249

Query: 122 SGRPSVRQEEKWWLPCPKVPSKGLSEDARKRLQQCRDCTN 3
           +GRPS+RQEEKWWLPCPK+PS GLSEDARKRLQQCRDCTN
Sbjct: 250 TGRPSIRQEEKWWLPCPKLPSNGLSEDARKRLQQCRDCTN 289


>ref|XP_003537755.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 566

 Score =  348 bits (893), Expect = 1e-93
 Identities = 187/282 (66%), Positives = 208/282 (73%), Gaps = 7/282 (2%)
 Frame = -2

Query: 827 MASVSSEDCSD---DRCGXXXXXXXXXXXXXXXXXXXXXXXXXSISAESPLGRRGFAGNS 657
           M SVSSED SD   +RCG                           S+ + L  R  A + 
Sbjct: 1   MGSVSSEDASDHMSNRCGSYSLSADVSESESCSSFSARRFDAEGASSSANLSPRPVAAHF 60

Query: 656 GFP-APVMFPVVGGKDVVVWEDRTQKSEADLSEVLMIKERFAKLLLGEDMSGGGKGVCTA 480
            FP A V+ PV+GGKDV VW+    K + DLSEV M+KERFAKLLLGEDMSGGGKGVCTA
Sbjct: 61  NFPPAQVLLPVIGGKDVFVWD---HKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTA 117

Query: 479 LAISNAITNLSATVFGELWRLEPLAHQKKAMWRREMECLLWVSDSIVELVPSIQQFPGGG 300
           LAISNAITNLSATVFGELWRLEPLA QKKAMWRREME LL VSDSIVELVPS+QQFPGGG
Sbjct: 118 LAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGG 177

Query: 299 SYEVMATQPRSDLYINLPALKKLDAMLISILDEFHDLEFWYVERGM---DVAEGDVYPSA 129
           +YEVMAT+PRSDLYINLPALKKLD ML+S+LD FHD +FWYV+RG+   D  + D Y   
Sbjct: 178 TYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFWYVDRGIILGDSKDCDAY--- 234

Query: 128 FSSGRPSVRQEEKWWLPCPKVPSKGLSEDARKRLQQCRDCTN 3
              GRPSVRQEEKWWLP PK+P  GLSE++RKRLQQCRDCTN
Sbjct: 235 ---GRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTN 273


Top