BLASTX nr result

ID: Cnidium21_contig00024332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024332
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related or...   164   1e-38
ref|NP_180592.1| biogenesis of lysosome-related organelles compl...   157   2e-36
ref|XP_002319421.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36
ref|XP_002517726.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related or...   154   2e-35

>ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1 [Vitis vinifera] gi|297745789|emb|CBI15845.3|
           unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  164 bits (415), Expect = 1e-38
 Identities = 78/126 (61%), Positives = 102/126 (80%)
 Frame = -3

Query: 606 SSSSKNLEASLLQLISNHNQSSLRLKQHTXXXXXXXXXXXIRVSDVLVESVNGGVEECYI 427
           ++    LEASLLQLI +H+Q+SL+L+  T           +RVSD+LV++VNGGV+E +I
Sbjct: 23  NADPSGLEASLLQLIQDHHQTSLKLRDETEKAKNDAIRTAMRVSDLLVDTVNGGVQEAFI 82

Query: 426 NQKRIELEIQALSSTILRFAKQTDQWLLASRSLNNAVKEIGDFENWMKTMEFDCKSINAA 247
           N+KRIELE +AL++T++RFAKQT QWL AS ++N A+KEIGDFENWMKTM+FDC+SINAA
Sbjct: 83  NEKRIELESRALTATVIRFAKQTHQWLAASHAINTAIKEIGDFENWMKTMDFDCRSINAA 142

Query: 246 IRNIHQ 229
           IRNIHQ
Sbjct: 143 IRNIHQ 148


>ref|NP_180592.1| biogenesis of lysosome-related organelles complex 1 subunit 1
           [Arabidopsis thaliana]
           gi|3024583|sp|O22929.1|BL1S1_ARATH RecName:
           Full=Biogenesis of lysosome-related organelles complex 1
           subunit 1; Short=BLOC-1 subunit 1; AltName:
           Full=GCN5-like protein 1; AltName: Full=Protein RT14
           homolog gi|2347196|gb|AAC16935.1| unknown protein
           [Arabidopsis thaliana] gi|30793871|gb|AAP40388.1|
           unknown protein [Arabidopsis thaliana]
           gi|30794132|gb|AAP40508.1| unknown protein [Arabidopsis
           thaliana] gi|110738901|dbj|BAF01372.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330253277|gb|AEC08371.1| biogenesis of
           lysosome-related organelles complex 1 subunit 1
           [Arabidopsis thaliana]
          Length = 152

 Score =  157 bits (397), Expect = 2e-36
 Identities = 74/133 (55%), Positives = 101/133 (75%)
 Frame = -3

Query: 627 YLKKMEKSSSSKNLEASLLQLISNHNQSSLRLKQHTXXXXXXXXXXXIRVSDVLVESVNG 448
           +L+K +    S+ LE+SLLQLI ++ +SSL+L++ T            R +D+LV++VNG
Sbjct: 17  FLEKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNG 76

Query: 447 GVEECYINQKRIELEIQALSSTILRFAKQTDQWLLASRSLNNAVKEIGDFENWMKTMEFD 268
           GVEEC++N+KRIE EI+ L+ T+ +F KQTDQWL  + ++N+AVKEIGDFENWMKTMEFD
Sbjct: 77  GVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFD 136

Query: 267 CKSINAAIRNIHQ 229
           CK I AAIRNIH+
Sbjct: 137 CKKITAAIRNIHE 149


>ref|XP_002319421.1| predicted protein [Populus trichocarpa] gi|222857797|gb|EEE95344.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  156 bits (395), Expect = 3e-36
 Identities = 72/135 (53%), Positives = 103/135 (76%)
 Frame = -3

Query: 633 PEYLKKMEKSSSSKNLEASLLQLISNHNQSSLRLKQHTXXXXXXXXXXXIRVSDVLVESV 454
           PE  K  + + +  +LE+SLLQ+ ++HN +SLRL++ T            RV+D+LV+ V
Sbjct: 17  PECEKPPQSNPTGNDLESSLLQIFTDHNHTSLRLRETTVIETEKAKKEAARVADLLVDKV 76

Query: 453 NGGVEECYINQKRIELEIQALSSTILRFAKQTDQWLLASRSLNNAVKEIGDFENWMKTME 274
           NGGV+E ++N+KRIE+EI++L+++I+RF KQ+DQWL A+ S+N A+KEIGDFENWMKTME
Sbjct: 77  NGGVQESFVNEKRIEMEIRSLAASIVRFMKQSDQWLTATHSINTAIKEIGDFENWMKTME 136

Query: 273 FDCKSINAAIRNIHQ 229
           +DCKSI  AI NIH+
Sbjct: 137 YDCKSITTAIHNIHK 151


>ref|XP_002517726.1| conserved hypothetical protein [Ricinus communis]
           gi|223543124|gb|EEF44658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 148

 Score =  154 bits (389), Expect = 2e-35
 Identities = 72/121 (59%), Positives = 97/121 (80%)
 Frame = -3

Query: 591 NLEASLLQLISNHNQSSLRLKQHTXXXXXXXXXXXIRVSDVLVESVNGGVEECYINQKRI 412
           +LE SLLQLI +H+Q+SLRL+++T            +VS +L+++VNGGV+E +IN+KRI
Sbjct: 28  SLEGSLLQLIQDHHQTSLRLRENTEKAKKDAIRKAAKVSGLLMDAVNGGVQESFINEKRI 87

Query: 411 ELEIQALSSTILRFAKQTDQWLLASRSLNNAVKEIGDFENWMKTMEFDCKSINAAIRNIH 232
           E EI+AL++T+ RF +QTD WL A+ ++N A+KEIGDFENW+KTMEFDCKSINAAIR IH
Sbjct: 88  EFEIRALAATVSRFMRQTDHWLTATHAINTAIKEIGDFENWLKTMEFDCKSINAAIRTIH 147

Query: 231 Q 229
           Q
Sbjct: 148 Q 148


>ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1-like [Glycine max]
          Length = 205

 Score =  154 bits (388), Expect = 2e-35
 Identities = 78/129 (60%), Positives = 92/129 (71%)
 Frame = -3

Query: 615 MEKSSSSKNLEASLLQLISNHNQSSLRLKQHTXXXXXXXXXXXIRVSDVLVESVNGGVEE 436
           M   +  K LEASL  LI  H+  SL L  HT            RVSD+LVE+VNGGV++
Sbjct: 7   MAMDAEPKGLEASLQHLIDLHHHKSLVLAHHTDKAKKDAIRKAERVSDLLVEAVNGGVQD 66

Query: 435 CYINQKRIELEIQALSSTILRFAKQTDQWLLASRSLNNAVKEIGDFENWMKTMEFDCKSI 256
            +INQKRIELEI+ L++TI RF KQTDQWL A+ +LN A+KEIGDFENWMK MEFDCKSI
Sbjct: 67  SFINQKRIELEIRTLAATITRFMKQTDQWLAATHALNTALKEIGDFENWMKIMEFDCKSI 126

Query: 255 NAAIRNIHQ 229
             AI+NIHQ
Sbjct: 127 TTAIQNIHQ 135


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