BLASTX nr result

ID: Cnidium21_contig00024323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024323
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302577.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-12
ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-12
ref|XP_002511843.1| DNA binding protein, putative [Ricinus commu...    74   8e-12
ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265...    74   9e-12
ref|XP_003552386.1| PREDICTED: uncharacterized protein LOC100802...    74   1e-11

>ref|XP_002302577.1| predicted protein [Populus trichocarpa] gi|222844303|gb|EEE81850.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 73.9 bits (180), Expect(2) = 1e-12
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = -3

Query: 406 GRFEILCLSGSYLHNDGGNSRGQTGGLSISLANSDXXXXXXXXXXILIAASPVQVIIGSF 227
           GRFEILCLSGSYL ++ G SR +TGGLS+SLA+ D          +LIAASPVQVI GSF
Sbjct: 199 GRFEILCLSGSYLFSNDGGSRNRTGGLSVSLASPDGCVIGGGVGGVLIAASPVQVIAGSF 258

Query: 226 M 224
           +
Sbjct: 259 L 259



 Score = 23.5 bits (49), Expect(2) = 1e-12
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 132 KTKSTANADNTDRQIGDSPINQVHSHLS*GLSPTSSM 22
           K +    A ++D Q  ++P+       S  L+PTSSM
Sbjct: 269 KVEGAEVARDSDHQTVENPVTPTSVQPSLNLTPTSSM 305


>ref|XP_002320785.1| predicted protein [Populus trichocarpa] gi|222861558|gb|EEE99100.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 72.8 bits (177), Expect(2) = 2e-12
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = -3

Query: 406 GRFEILCLSGSYLHNDGGNSRGQTGGLSISLANSDXXXXXXXXXXILIAASPVQVIIGSF 227
           GRFEILCLSGSYL  + G SR ++GGLS+SLA+ D          +LIAASPVQVI+GSF
Sbjct: 206 GRFEILCLSGSYLLTNDGGSRNRSGGLSVSLASPDGRVIGGGVGGVLIAASPVQVIVGSF 265

Query: 226 M 224
           +
Sbjct: 266 L 266



 Score = 24.3 bits (51), Expect(2) = 2e-12
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 132 KTKSTANADNTDRQIGDSPINQVHSHLS*GLSPTSSM 22
           K +    A ++D Q  ++P+       S  L+PTSSM
Sbjct: 277 KVEGPEGARDSDHQTVENPVTPTSVQPSQNLTPTSSM 313


>ref|XP_002511843.1| DNA binding protein, putative [Ricinus communis]
           gi|223549023|gb|EEF50512.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 340

 Score = 74.3 bits (181), Expect(2) = 8e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = -3

Query: 406 GRFEILCLSGSYLHNDGGNSRGQTGGLSISLANSDXXXXXXXXXXILIAASPVQVIIGSF 227
           GRFEILCLSGSYL    G SR +TGGLS+SLA+ D          +LIAASPVQVI+GSF
Sbjct: 211 GRFEILCLSGSYLVTSNGGSRNRTGGLSVSLASPDGRVIGGGVGGMLIAASPVQVIVGSF 270

Query: 226 M 224
           +
Sbjct: 271 L 271



 Score = 20.4 bits (41), Expect(2) = 8e-12
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 132 KTKSTANADNTDRQIGDSPINQVHSHLS*GLSPTSSM 22
           K +    A ++D Q  ++P+       S  L+PTSS+
Sbjct: 281 KGEGPEGARDSDHQTVENPVTPSSVPPSQNLTPTSSI 317


>ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265498 [Vitis vinifera]
           gi|297745264|emb|CBI40344.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = -3

Query: 406 GRFEILCLSGSYLHNDGGNSRGQTGGLSISLANSDXXXXXXXXXXILIAASPVQVIIGSF 227
           GRFEILCLSGSYL  D G SR +TGGLS+SLA+ D          +L AASPVQVI+GSF
Sbjct: 215 GRFEILCLSGSYLLTDNGGSRNRTGGLSVSLASPDGRVIGGGVGGMLTAASPVQVIVGSF 274

Query: 226 M 224
           +
Sbjct: 275 I 275


>ref|XP_003552386.1| PREDICTED: uncharacterized protein LOC100802542 isoform 1 [Glycine
           max] gi|356568376|ref|XP_003552387.1| PREDICTED:
           uncharacterized protein LOC100802542 isoform 2 [Glycine
           max]
          Length = 342

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/61 (59%), Positives = 45/61 (73%)
 Frame = -3

Query: 406 GRFEILCLSGSYLHNDGGNSRGQTGGLSISLANSDXXXXXXXXXXILIAASPVQVIIGSF 227
           GRFEI+CLSGSYL  D G SR +TGGLS+SLA+ D          +LIA+SPVQV++GSF
Sbjct: 208 GRFEIVCLSGSYLVTDNGGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVVVGSF 267

Query: 226 M 224
           +
Sbjct: 268 L 268


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