BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024313
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   101   6e-20
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   101   6e-20
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]             95   7e-18
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar...    91   1e-16

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1   MGVAADSWMAFTDKFLTL-DDNSDEXXXXXXXXXXXIDIYYDALDAPKTGKEVKVPKQYR 177
           +G+AAD+W+ F D+ LTL DD SDE            DIYYDALDAPK+G +V V K+ +
Sbjct: 698 IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 757

Query: 178 ADLYPHYMGKGDGYHSSSVLGKISDIVETYKTERMST 288
           A+ +PH+MG+   YHS+S+LG+I D VE+++ E  ST
Sbjct: 758 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQST 794


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1    MGVAADSWMAFTDKFLTL-DDNSDEXXXXXXXXXXXIDIYYDALDAPKTGKEVKVPKQYR 177
            +G+AAD+W+ F D+ LTL DD SDE            DIYYDALDAPK+G +V V K+ +
Sbjct: 712  IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 771

Query: 178  ADLYPHYMGKGDGYHSSSVLGKISDIVETYKTERMST 288
            A+ +PH+MG+   YHS+S+LG+I D VE+++ E  ST
Sbjct: 772  AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQST 808


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +1

Query: 1    MGVAADSWMAFTDKFLTL-DDNSDEXXXXXXXXXXXIDIYYDALDAPKTGKEVKVPKQYR 177
            +G+AAD+W+ F D+ LTL DD SDE            DIYYDALDAPK+G +V V K+ +
Sbjct: 981  IGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELK 1040

Query: 178  ADLYPHYMGKGDGYHSSSVLGKISDIVETYKTERMST 288
            A+ +PH+MG+   YHS+S+LG+I D VE+++ E  ST
Sbjct: 1041 AEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQST 1077


>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
          Length = 929

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1    MGVAADSWMAFTDKFLTL-DDNSDEXXXXXXXXXXXIDIYYDALDAPKTGKEVKVPKQYR 177
            +G+AADSW+   D+FL L DD ++E           IDIYYDALDAPK G +V +P + +
Sbjct: 668  IGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLK 727

Query: 178  ADLYPHYMGKGDGYHSSSVLGKISDIVETYKTER---MSTHGVCCLLIVSYN-LTKYLFS 345
             D++PHYM +   + S+S+LG I D V++  TE     S  G   +L+ +YN +TK + +
Sbjct: 728  PDIFPHYMERDKKFQSTSILGLIFDFVKSQTTEEPSPSSGKGPLLVLLYTYNQITKEIIN 787

Query: 346  RQSC 357
               C
Sbjct: 788  HDMC 791


>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
            gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 4;
            Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
            4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
            polymerase family protein [Arabidopsis thaliana]
          Length = 927

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1    MGVAADSWMAFTDKFLTL-DDNSDEXXXXXXXXXXXIDIYYDALDAPKTGKEVKVPKQYR 177
            +G AADSW+A  D+FLTL D+N  E            DIYYDA+DAPKTG EV +P   +
Sbjct: 748  IGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLDVK 807

Query: 178  ADLYPHYMGKGDGYHSSSVLGKISDIVETYKTERMSTHGV 297
             DL+PHYM +   + S+S+LG I D V+ +  E  +  G+
Sbjct: 808  VDLFPHYMERNKTFKSTSILGLIFDTVDFHNAEDTTPSGI 847