BLASTX nr result
ID: Cnidium21_contig00024307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024307 (612 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|g... 52 1e-06 ref|XP_002511201.1| ATP binding protein, putative [Ricinus commu... 51 3e-06 ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266... 49 1e-05 emb|CBI15650.3| unnamed protein product [Vitis vinifera] 49 1e-05 >ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|gb|AES72347.1| Spastin [Medicago truncatula] Length = 1260 Score = 52.0 bits (123), Expect(2) = 1e-06 Identities = 23/31 (74%), Positives = 27/31 (87%) Frame = -3 Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389 SENTK+VLIAA +IHLKH+E KYTA LPT+ Sbjct: 460 SENTKNVLIAACFIHLKHKEHAKYTADLPTV 490 Score = 25.8 bits (55), Expect(2) = 1e-06 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -2 Query: 383 RILLSGPPAGSEIYVDLV 330 RILLSGP AGSEIY +++ Sbjct: 493 RILLSGP-AGSEIYSEML 509 >ref|XP_002511201.1| ATP binding protein, putative [Ricinus communis] gi|223550316|gb|EEF51803.1| ATP binding protein, putative [Ricinus communis] Length = 1240 Score = 50.8 bits (120), Expect(2) = 3e-06 Identities = 22/31 (70%), Positives = 29/31 (93%) Frame = -3 Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389 SENTK+VLIAA++IHL+H+E VKYTA+L T+ Sbjct: 439 SENTKNVLIAASFIHLRHKEHVKYTAELTTV 469 Score = 25.8 bits (55), Expect(2) = 3e-06 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -2 Query: 383 RILLSGPPAGSEIYVDLV 330 RILLSGP AGSEIY +++ Sbjct: 472 RILLSGP-AGSEIYQEML 488 >ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266414 [Vitis vinifera] Length = 1247 Score = 48.9 bits (115), Expect(2) = 1e-05 Identities = 21/31 (67%), Positives = 28/31 (90%) Frame = -3 Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389 SENTK+VLIAA++IHLKHRE K+T++L T+ Sbjct: 444 SENTKNVLIAASFIHLKHREHAKFTSELTTV 474 Score = 25.8 bits (55), Expect(2) = 1e-05 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -2 Query: 383 RILLSGPPAGSEIYVDLV 330 RILLSGP AGSEIY +++ Sbjct: 477 RILLSGP-AGSEIYQEML 493 >emb|CBI15650.3| unnamed protein product [Vitis vinifera] Length = 1216 Score = 48.9 bits (115), Expect(2) = 1e-05 Identities = 21/31 (67%), Positives = 28/31 (90%) Frame = -3 Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389 SENTK+VLIAA++IHLKHRE K+T++L T+ Sbjct: 413 SENTKNVLIAASFIHLKHREHAKFTSELTTV 443 Score = 25.8 bits (55), Expect(2) = 1e-05 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -2 Query: 383 RILLSGPPAGSEIYVDLV 330 RILLSGP AGSEIY +++ Sbjct: 446 RILLSGP-AGSEIYQEML 462