BLASTX nr result

ID: Cnidium21_contig00024307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024307
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|g...    52   1e-06
ref|XP_002511201.1| ATP binding protein, putative [Ricinus commu...    51   3e-06
ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266...    49   1e-05
emb|CBI15650.3| unnamed protein product [Vitis vinifera]               49   1e-05

>ref|XP_003602096.1| Spastin [Medicago truncatula] gi|355491144|gb|AES72347.1| Spastin
           [Medicago truncatula]
          Length = 1260

 Score = 52.0 bits (123), Expect(2) = 1e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389
           SENTK+VLIAA +IHLKH+E  KYTA LPT+
Sbjct: 460 SENTKNVLIAACFIHLKHKEHAKYTADLPTV 490



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 383 RILLSGPPAGSEIYVDLV 330
           RILLSGP AGSEIY +++
Sbjct: 493 RILLSGP-AGSEIYSEML 509


>ref|XP_002511201.1| ATP binding protein, putative [Ricinus communis]
           gi|223550316|gb|EEF51803.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1240

 Score = 50.8 bits (120), Expect(2) = 3e-06
 Identities = 22/31 (70%), Positives = 29/31 (93%)
 Frame = -3

Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389
           SENTK+VLIAA++IHL+H+E VKYTA+L T+
Sbjct: 439 SENTKNVLIAASFIHLRHKEHVKYTAELTTV 469



 Score = 25.8 bits (55), Expect(2) = 3e-06
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 383 RILLSGPPAGSEIYVDLV 330
           RILLSGP AGSEIY +++
Sbjct: 472 RILLSGP-AGSEIYQEML 488


>ref|XP_002279926.2| PREDICTED: uncharacterized protein LOC100266414 [Vitis vinifera]
          Length = 1247

 Score = 48.9 bits (115), Expect(2) = 1e-05
 Identities = 21/31 (67%), Positives = 28/31 (90%)
 Frame = -3

Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389
           SENTK+VLIAA++IHLKHRE  K+T++L T+
Sbjct: 444 SENTKNVLIAASFIHLKHREHAKFTSELTTV 474



 Score = 25.8 bits (55), Expect(2) = 1e-05
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 383 RILLSGPPAGSEIYVDLV 330
           RILLSGP AGSEIY +++
Sbjct: 477 RILLSGP-AGSEIYQEML 493


>emb|CBI15650.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score = 48.9 bits (115), Expect(2) = 1e-05
 Identities = 21/31 (67%), Positives = 28/31 (90%)
 Frame = -3

Query: 481 SENTKDVLIAATYIHLKHREQVKYTAKLPTI 389
           SENTK+VLIAA++IHLKHRE  K+T++L T+
Sbjct: 413 SENTKNVLIAASFIHLKHREHAKFTSELTTV 443



 Score = 25.8 bits (55), Expect(2) = 1e-05
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -2

Query: 383 RILLSGPPAGSEIYVDLV 330
           RILLSGP AGSEIY +++
Sbjct: 446 RILLSGP-AGSEIYQEML 462


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