BLASTX nr result

ID: Cnidium21_contig00024302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024302
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...    96   5e-18
ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatu...    94   2e-17
ref|XP_003539122.1| PREDICTED: uncharacterized protein LOC100781...    92   7e-17
emb|CBI16624.3| unnamed protein product [Vitis vinifera]               92   1e-16
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...    92   1e-16

>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 48/63 (76%), Positives = 53/63 (84%)
 Frame = -1

Query: 531 TATAASVPKLPSEIIGHSVVEIIKE*NAELQARTGKFRKQATAIGEWDRRILQNRDALLR 352
           +AT +S PKLPSEI G +V EIIKE NAELQ RTGKFRKQA AI EWDRRI+QNRD LLR
Sbjct: 542 SATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLR 601

Query: 351 LEV 343
           LE+
Sbjct: 602 LEI 604


>ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatula]
           gi|355497564|gb|AES78767.1| Nuclear pore glycoprotein
           [Medicago truncatula]
          Length = 299

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -1

Query: 531 TATAASVPKLPSEIIGHSVVEIIKE*NAELQARTGKFRKQATAIGEWDRRILQNRDALLR 352
           + + A+ PKLPSEI G +V EIIKE NAELQ RTGKFRKQA AI EWDRRILQNRD LLR
Sbjct: 85  STSVAATPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDVLLR 144

Query: 351 LEV 343
           LE+
Sbjct: 145 LEI 147


>ref|XP_003539122.1| PREDICTED: uncharacterized protein LOC100781711 [Glycine max]
          Length = 761

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 46/63 (73%), Positives = 51/63 (80%)
 Frame = -1

Query: 531 TATAASVPKLPSEIIGHSVVEIIKE*NAELQARTGKFRKQATAIGEWDRRILQNRDALLR 352
           + + A+ PKLPSEI G +V EIIKE NAELQ RTGKFRKQA AI EWDRRIL NRD LLR
Sbjct: 547 STSVAAAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILNNRDVLLR 606

Query: 351 LEV 343
           LE+
Sbjct: 607 LEI 609


>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 45/63 (71%), Positives = 50/63 (79%)
 Frame = -1

Query: 531 TATAASVPKLPSEIIGHSVVEIIKE*NAELQARTGKFRKQATAIGEWDRRILQNRDALLR 352
           T   A  PK+PSEI G +V EIIKE N ELQ RTGKFRKQATAI EWD++ILQNRD LLR
Sbjct: 594 TTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLR 653

Query: 351 LEV 343
           LE+
Sbjct: 654 LEI 656


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 45/63 (71%), Positives = 50/63 (79%)
 Frame = -1

Query: 531 TATAASVPKLPSEIIGHSVVEIIKE*NAELQARTGKFRKQATAIGEWDRRILQNRDALLR 352
           T   A  PK+PSEI G +V EIIKE N ELQ RTGKFRKQATAI EWD++ILQNRD LLR
Sbjct: 561 TTAVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLR 620

Query: 351 LEV 343
           LE+
Sbjct: 621 LEI 623


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