BLASTX nr result

ID: Cnidium21_contig00024272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024272
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23759.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1...    71   8e-11
ref|XP_002529531.1| serine hydroxymethyltransferase, putative [R...    71   1e-10
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1...    70   2e-10
ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago tr...    69   3e-10

>emb|CBI23759.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 5/55 (9%)
 Frame = -1

Query: 450 ADFLFRAAQIANLVQR-----QKDSLMGLQSNKDIVELRTRVENFATQFALPGLD 301
           ADFL RAAQIA++VQR     QK  L GL+SNKDIVELRTRVE FATQF +PG D
Sbjct: 290 ADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQFVMPGFD 344


>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
          Length = 577

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 5/55 (9%)
 Frame = -1

Query: 450 ADFLFRAAQIANLVQR-----QKDSLMGLQSNKDIVELRTRVENFATQFALPGLD 301
           ADFL RAAQIA++VQR     QK  L GL+SNKDIVELRTRVE FATQF +PG D
Sbjct: 522 ADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQFVMPGFD 576


>ref|XP_002529531.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223530979|gb|EEF32834.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 590

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/53 (67%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
 Frame = -1

Query: 450 ADFLFRAAQIANLVQRQ--KDSLMGLQSNKDIVELRTRVENFATQFALPGLDV 298
           ADFL +AA+IAN++QR+  K  L GLQSNKDI+ELR RVE FATQFA+PG D+
Sbjct: 538 ADFLLKAARIANILQREHGKALLKGLQSNKDILELRNRVETFATQFAMPGFDL 590


>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
          Length = 563

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/56 (62%), Positives = 45/56 (80%), Gaps = 5/56 (8%)
 Frame = -1

Query: 450 ADFLFRAAQIANLVQR-----QKDSLMGLQSNKDIVELRTRVENFATQFALPGLDV 298
           A+FL RAAQIA+++QR     QK +L GL+SN+D+VELR RVE FATQFA+PG D+
Sbjct: 508 AEFLIRAAQIASILQREHGKLQKTTLKGLESNRDVVELRARVEAFATQFAMPGFDI 563


>ref|XP_003593000.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|355482048|gb|AES63251.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
          Length = 593

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/56 (64%), Positives = 43/56 (76%), Gaps = 5/56 (8%)
 Frame = -1

Query: 450 ADFLFRAAQIANLVQRQKDSLMG-----LQSNKDIVELRTRVENFATQFALPGLDV 298
           ADFLFRAAQIAN++QR+   L       L+SN+DI+ELR RVE FATQFALPG D+
Sbjct: 538 ADFLFRAAQIANMLQREHGKLQKTISKVLESNRDILELRARVEAFATQFALPGFDI 593


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