BLASTX nr result

ID: Cnidium21_contig00024270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024270
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511265.1| nucleic acid binding protein, putative [Rici...    88   6e-16
ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-...    86   2e-15
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...    85   5e-15
ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-...    85   7e-15
emb|CBI14884.3| unnamed protein product [Vitis vinifera]               84   1e-14

>ref|XP_002511265.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550380|gb|EEF51867.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 1736

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/89 (47%), Positives = 57/89 (64%)
 Frame = +1

Query: 85  NEKIDTEGERHAQCDRLPNKGLFSCVTCGILCFACVAIVKPTEVAARYLKSANCSNFTEW 264
           N + + +G  H   D+L ++ LFSCVTCGIL F C+A+V+PTE AARYL SA+CS F +W
Sbjct: 496 NTRTENKGTTHG--DKLSDQRLFSCVTCGILSFDCIAVVQPTETAARYLMSADCSFFNDW 553

Query: 265 GNGSEVNSECLTLSGGNAETAELSTGLGW 351
             GS   +  LT + G+  T +L    GW
Sbjct: 554 IVGSGATNNRLTTTNGDPNTCQLDQPTGW 582


>ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1586

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
 Frame = +1

Query: 4   KFPKSSGGSRLPLFGRSNSESCASPYENEKIDTEGERH-AQCDRLPNKGLFSCVTCGILC 180
           KF      +R+  F  + + S AS   +  +  + +R  +Q D L ++ LFSCVTCGILC
Sbjct: 485 KFTTLCERNRISTFNVNGNISTAS---SNPLQRDNDRETSQGDGLSDQRLFSCVTCGILC 541

Query: 181 FACVAIVKPTEVAARYLKSANCSNFTEWGNGSEVNSECLTLSGGNAETAELSTGLGW 351
           F+CVAIV+P E AARYL SA+CS F +W  GS V+S  LT++  +A   + +   GW
Sbjct: 542 FSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSSNKLTIAHEDATITKPNMYTGW 598


>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/99 (47%), Positives = 60/99 (60%)
 Frame = +1

Query: 55  NSESCASPYENEKIDTEGERHAQCDRLPNKGLFSCVTCGILCFACVAIVKPTEVAARYLK 234
           N     S +   + DTE E   Q D L ++ LFSCVTCGILCF+CVAIV+P E AARYL 
Sbjct: 502 NGNISISSFNPLQRDTERET-CQGDGLSDQRLFSCVTCGILCFSCVAIVQPREPAARYLM 560

Query: 235 SANCSNFTEWGNGSEVNSECLTLSGGNAETAELSTGLGW 351
           SA+CS F +W  GS V++   T++   A   E +   GW
Sbjct: 561 SADCSFFNDWVVGSGVSNNKFTIAREEATIPESNMYTGW 599


>ref|XP_003522415.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1567

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/77 (55%), Positives = 53/77 (68%)
 Frame = +1

Query: 121 QCDRLPNKGLFSCVTCGILCFACVAIVKPTEVAARYLKSANCSNFTEWGNGSEVNSECLT 300
           Q D L ++ LFSCVTCGILCF+CVAIV+P E AARYL SA+CS F +W  GS V+S   T
Sbjct: 501 QGDSLSDQRLFSCVTCGILCFSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSSNKFT 560

Query: 301 LSGGNAETAELSTGLGW 351
           ++   A  AE +   GW
Sbjct: 561 IALEEATIAEPNMYTGW 577


>emb|CBI14884.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
 Frame = +1

Query: 46  GRSNSESCASPYENEKIDTEGERHAQCDRLPNKGLFSCVTCGILCFACVAIVKPTEVAAR 225
           G  N  +  S  +N +   E   H   D L ++ LFSCVTCGIL FACVA+++P E AAR
Sbjct: 287 GNDNGSALTSQTQNMETKIESISHG--DGLSDQALFSCVTCGILSFACVALIQPREAAAR 344

Query: 226 YLKSANCSNFTEW--GNG-SEVNSECLTLSGGNAETAELSTGLGW 351
           YL SA+CS F +W  G+G S V +E  T   G+   +EL++  GW
Sbjct: 345 YLMSADCSFFNDWIVGSGPSGVANEDFTGVSGDVHNSELNSCSGW 389