BLASTX nr result

ID: Cnidium21_contig00024256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024256
         (1713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   692   0.0  
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   686   0.0  
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   680   0.0  
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   655   0.0  
gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]         649   0.0  

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
            [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
            protein product [Vitis vinifera]
          Length = 503

 Score =  692 bits (1786), Expect = 0.0
 Identities = 333/470 (70%), Positives = 397/470 (84%)
 Frame = -3

Query: 1516 MTIKTMIKWPKKISRSLVEQLIRAEKDPQKALVIFDAAAAEYANGYKHDHNTFGLMISRL 1337
            M  KT+IKW K+I  + V QLI+AE+D QKA+VIFD+A AEY NG++H H TF LMISRL
Sbjct: 1    MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 1336 LSANQFRPAEDLLNRMKDEKCKITEDTFLTICRAYGRVHKPGEVIRIFQKMKEYDCEVTP 1157
            +SAN FR AE+LL RMK+EKC ITED FL+ICRAYGRVHKP + +R+F+KMKEY+CE + 
Sbjct: 61   VSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120

Query: 1156 KSYVTVFSILVDENQLKVAIKFYKYMRQMGIPPSVVSLNVLIKALCKNSGTINAAFQIFH 977
            KSY+TVF+ILV ENQLK+A++FY+YMR+MGIPPSV SLNVLIKALCKNSGT++AA +IF 
Sbjct: 121  KSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFR 180

Query: 976  EMPSHGCSPDSYTYGTLINGLCRLKRISEAKELFAEMGTKGCLPSVVTYTSLIHGLCLSN 797
            EMP+ GC PDSYTYGTLINGLCRL +I EAKELF EM TK C P+VVTYTSLIHGLC S 
Sbjct: 181  EMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSK 240

Query: 796  DLDEAMGLFEEMKEKGIVANLYTYSSLMDGLCKGGRCSQAMELLEILTNEHLQPNTVTYS 617
            DLD A+ L EEM  KGI  N++TYSSLMDG CK G  S+A+ELL+++ +    PN +TYS
Sbjct: 241  DLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYS 300

Query: 616  SLINGLCKEERLSEAVELLDRMKLRGFKPDAGLYGKIIGGFCDAKKFHEAANFLDEMVFG 437
            +L++GLCKE +L EAVE+LDRMKL+G +PDAGLYGKII GFCD  KFHEAANFLDEMV G
Sbjct: 301  TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLG 360

Query: 436  RISPNRLTWSLHVRINNTVVRGLCETDPNRAFQLYLSMRTRGISVEAETFDFLVDRFCKK 257
             ISPNRLTWSLHVRI+N VV+GLC   PNRAFQLYLSMRTRGIS++A+TFD LV+ FC K
Sbjct: 361  GISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNK 420

Query: 256  GDLHKAARIVEEMVLDGCIPNETTWSTVLRGFWDRKKVREAAELLQVELV 107
            GDLHKAA +V+EMVLDGCIP+E TW+ V+  FWDR+KVRE+AEL+QVEL+
Sbjct: 421  GDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELM 470


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  686 bits (1771), Expect = 0.0
 Identities = 331/474 (69%), Positives = 396/474 (83%)
 Frame = -3

Query: 1516 MTIKTMIKWPKKISRSLVEQLIRAEKDPQKALVIFDAAAAEYANGYKHDHNTFGLMISRL 1337
            M  KT+IKW K+I  + V QLI+AE+D QKA+VIFD+A AEY NG++H H TF LMISRL
Sbjct: 1    MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 1336 LSANQFRPAEDLLNRMKDEKCKITEDTFLTICRAYGRVHKPGEVIRIFQKMKEYDCEVTP 1157
            +SAN FR AE+LL RMK+EKC ITED FL+ICRAYGRVHKP + +R+F+KMKEY+CE + 
Sbjct: 61   VSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120

Query: 1156 KSYVTVFSILVDENQLKVAIKFYKYMRQMGIPPSVVSLNVLIKALCKNSGTINAAFQIFH 977
            KSY+TVF+ILV ENQLK+A++FY+YMR+MGIPPSV SLNVLIKALCKNSGT++AA +IF 
Sbjct: 121  KSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFR 180

Query: 976  EMPSHGCSPDSYTYGTLINGLCRLKRISEAKELFAEMGTKGCLPSVVTYTSLIHGLCLSN 797
            EMP+ GC P SYTYGTLI GLCRL +I EAKELF EM TK C P+VVTY SLIHGLC S 
Sbjct: 181  EMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSK 240

Query: 796  DLDEAMGLFEEMKEKGIVANLYTYSSLMDGLCKGGRCSQAMELLEILTNEHLQPNTVTYS 617
            DLD A+ L EEM  KGI  N++TYSSLMDG CK G  S+A+ELL+++ +    PN +TYS
Sbjct: 241  DLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYS 300

Query: 616  SLINGLCKEERLSEAVELLDRMKLRGFKPDAGLYGKIIGGFCDAKKFHEAANFLDEMVFG 437
            +L++GLCKE +L EAVE+LDRMKL+G +PDAGLYGKII GFCD  KFHEAANFLDEMV G
Sbjct: 301  TLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLG 360

Query: 436  RISPNRLTWSLHVRINNTVVRGLCETDPNRAFQLYLSMRTRGISVEAETFDFLVDRFCKK 257
             ISPNRLTWSLHVRI+N VV+GLC   PNRAFQLYLSMRTRGIS++A+TFD LV+ FC K
Sbjct: 361  GISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNK 420

Query: 256  GDLHKAARIVEEMVLDGCIPNETTWSTVLRGFWDRKKVREAAELLQVELVDKFI 95
            GDLHKAA +V+EMVLDGCIP+E TW+ V+  FWDR+KVRE+AEL+QVEL+  F+
Sbjct: 421  GDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQVELMGTFL 474


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  680 bits (1754), Expect = 0.0
 Identities = 322/476 (67%), Positives = 404/476 (84%), Gaps = 1/476 (0%)
 Frame = -3

Query: 1516 MTIKTMIKWPKKISRSLVEQLIRAEKDPQKALVIFDAAAAEYANGYKHDHNTFGLMISRL 1337
            M +KT++KW K+I+ S VEQL+RAE+D +KA +IFD+A+AEY+NG++HDH TFG+MIS+L
Sbjct: 1    MGMKTLLKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKL 60

Query: 1336 LSANQFRPAEDLLNRMKDEKCKITEDTFLTICRAYGRVHKPGEVIRIFQKMKEYDCEVTP 1157
            +SAN+FRPAE++LNRMK+EKC+ITE+ FL+ICR YGRVH P + IR+F KM ++ C+ T 
Sbjct: 61   VSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTD 120

Query: 1156 KSYVTVFSILVDENQLKVAIKFYKYMRQMGIPPSVVSLNVLIKALCKNSGTINAAFQIFH 977
            KSY++VF+ILV+ENQLKVA+ FYKYMR+MG+  SVVSLNVLIKALCKNSGTI+AAF+IF 
Sbjct: 121  KSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFR 180

Query: 976  EMPSHGCSPDSYTYGTLINGLCRLKRISEAKELFAEMGTKGCLPSVVTYTSLIHGLCLSN 797
            EMP  GC PDSYTYGTLINGLC+L +  EAKELF EM TKGC PSVVTY+ L+HGLC + 
Sbjct: 181  EMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAG 240

Query: 796  DLDEAMGLFEEMKEKGIVANLYTYSSLMDGLCKGGRCSQAMELLEILTNEHLQPNTVTYS 617
            ++DEAMGLF++MK+K I  N++TYSSLMDGLCK G   +AMELLE++  +  +PN VTYS
Sbjct: 241  NVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYS 300

Query: 616  SLINGLCKEERLSEAVELLDRMKLRGFKPDAGLYGKIIGGFCDAKKFHEAANFLDEMVFG 437
            +LINGLCKE +L+EAVE LDRMKL+G KPDAGLYGKII GFC+ +KF EAA +LDEMV G
Sbjct: 301  TLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLG 360

Query: 436  RISPNRLTWSLHVRINNTVVRGLCET-DPNRAFQLYLSMRTRGISVEAETFDFLVDRFCK 260
            +ISPNR+TWSLHV++NN VV+GLC   + NR+FQLY+ MRTRGIS++A TFD LV  FCK
Sbjct: 361  QISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCK 420

Query: 259  KGDLHKAARIVEEMVLDGCIPNETTWSTVLRGFWDRKKVREAAELLQVELVDKFIE 92
            KGDLHKAARI +EMVLDGC+P+   WS V+ GFWDR+KVREA E + VEL+++F+E
Sbjct: 421  KGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEFVE 476


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like
            [Glycine max]
          Length = 479

 Score =  655 bits (1690), Expect = 0.0
 Identities = 320/477 (67%), Positives = 383/477 (80%), Gaps = 1/477 (0%)
 Frame = -3

Query: 1516 MTIKTMIKWPKKISRSLVEQLIRAEKDPQKALVIFDAAAAEYANGYKHDHNTFGLMISRL 1337
            M  KT+ KWPK+I+ SLV QLI+AEKD  KA+ +FD+A AEY NG++HDH TFGL+ISRL
Sbjct: 1    MGSKTLFKWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRL 60

Query: 1336 LSANQFRPAEDLLNRMKDEKCKITEDTFLTICRAYGRVHKPGEVIRIFQKMKEYDCEVTP 1157
            ++ NQFRPAE +L RMK EKC +TED FL+ICR YGRVH+P + IR+F KM+ +    T 
Sbjct: 61   VTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQ 120

Query: 1156 KSYVTVFSILVDENQLKVAIKFYKYMRQMGIPPSVVSLNVLIKALCKNSGTINAAFQIFH 977
            K+Y+T+  ILV+EN +K AI FY+ MR++GIP SVVSLN+LIKALCKN  T+++A +IF 
Sbjct: 121  KAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQ 180

Query: 976  EMPSHGCSPDSYTYGTLINGLCRLKRISEAKELFAEMGTKGCLPSVVTYTSLIHGLCLSN 797
            EMP+ GC PDSYTYGTLINGLCRL  ISEAKELF EM  KG   SVVTYTSLIHGLC SN
Sbjct: 181  EMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSN 240

Query: 796  DLDEAMGLFEEMKEKGIVANLYTYSSLMDGLCKGGRCSQAMELLEILTNEHLQPNTVTYS 617
            +LDEA+GL EEMK   I  N++TYSSLMDGLCKGG  SQAM+LLE++  +H  PN VTYS
Sbjct: 241  NLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYS 300

Query: 616  SLINGLCKEERLSEAVELLDRMKLRGFKPDAGLYGKIIGGFCDAKKFHEAANFLDEMVFG 437
            +LINGLCKE +L EAVE+LDRM+++G KP+AGLYGKII G C A  + EAANF+DEMV G
Sbjct: 301  TLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG 360

Query: 436  RISPNRLTWSLHVRINNTVVRGLC-ETDPNRAFQLYLSMRTRGISVEAETFDFLVDRFCK 260
             ISPNR +WSLHVR++N VV+GLC   DP RAFQLYLSMRTR ISVE +TFD LV  FCK
Sbjct: 361  GISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCK 420

Query: 259  KGDLHKAARIVEEMVLDGCIPNETTWSTVLRGFWDRKKVREAAELLQVELVDKFIES 89
            +GDLHKAARI+EEMVLDGCIP+E  W+ V+ G WDRKKVREA E L VEL  KF+E+
Sbjct: 421  RGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFVEA 477


>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  649 bits (1675), Expect = 0.0
 Identities = 314/477 (65%), Positives = 380/477 (79%), Gaps = 1/477 (0%)
 Frame = -3

Query: 1516 MTIKTMIKWPKKISRSLVEQLIRAEKDPQKALVIFDAAAAEYANGYKHDHNTFGLMISRL 1337
            M  KT+ KWPK+I+ SLVEQLI+AEKD  K LV+FD+A  EY+NG++HDHNTFG MI RL
Sbjct: 1    MASKTLFKWPKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRL 60

Query: 1336 LSANQFRPAEDLLNRMKDEKCKITEDTFLTICRAYGRVHKPGEVIRIFQKMKEYDCEVTP 1157
            +S NQFRPAE +L RMK E C++TED FLTICR YGRVH+P + IR+F KM+++  + T 
Sbjct: 61   VSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQ 120

Query: 1156 KSYVTVFSILVDENQLKVAIKFYKYMRQMGIPPSVVSLNVLIKALCKNSGTINAAFQIFH 977
            KSY+TVF ILV+EN +K AI FYK MR+ GIPP+VVSLN+LIKALCKN  T+ +AF++F 
Sbjct: 121  KSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFR 180

Query: 976  EMPSHGCSPDSYTYGTLINGLCRLKRISEAKELFAEMGTKGCLPSVVTYTSLIHGLCLSN 797
            EMP+ GC PDSYTYGTLINGLC+L +IS+AKEL  EM  KG  PSVV+YTSLIHGLC SN
Sbjct: 181  EMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSN 240

Query: 796  DLDEAMGLFEEMKEKGIVANLYTYSSLMDGLCKGGRCSQAMELLEILTNEHLQPNTVTYS 617
            +LDEA+ L EEM   GI  N++TYSSLMDGLCK G  SQAMELLE++    L PN VTYS
Sbjct: 241  NLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYS 300

Query: 616  SLINGLCKEERLSEAVELLDRMKLRGFKPDAGLYGKIIGGFCDAKKFHEAANFLDEMVFG 437
            +LINGLCKE +  EAVE+LDRM+L+G KPDAG+YG+II G C A  + EAANF+DEM  G
Sbjct: 301  TLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALG 360

Query: 436  RISPNRLTWSLHVRINNTVVRGLC-ETDPNRAFQLYLSMRTRGISVEAETFDFLVDRFCK 260
             ISPNR +W+ HV+++N VV+GLC   DP RAFQLYLSMRTRGISVE  TFD LV  FCK
Sbjct: 361  GISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCK 420

Query: 259  KGDLHKAARIVEEMVLDGCIPNETTWSTVLRGFWDRKKVREAAELLQVELVDKFIES 89
            +GDL+KAARI+EEM+LDGCIP+E  W+ ++ G WDRKKVRE  ELL  EL  KF+E+
Sbjct: 421  RGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFVEA 477


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