BLASTX nr result

ID: Cnidium21_contig00024235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024235
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinif...   166   2e-39
ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|2235455...   160   1e-37
ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]     148   4e-34
ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]     147   7e-34

>ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinifera]
           gi|296089029|emb|CBI38732.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/120 (63%), Positives = 96/120 (80%)
 Frame = +2

Query: 2   CGFPLKSLYIQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKGKVYRHLFYNMF 181
           CGFP+K+L++QYSPGNIRLMKCE CK VADEYIECE+MI++IDLILHK K YRHL +N+ 
Sbjct: 8   CGFPIKTLFLQYSPGNIRLMKCENCKAVADEYIECESMIVLIDLILHKPKAYRHLLFNLL 67

Query: 182 TRETLNFEVWLWKLAFGFLILDTYKMFVLSRIEDGLKSSMSFASLISCYGKLFMDVVFGN 361
             +TLNF+  LWK A GFL+LD Y++ VL+R E+    SMSF+SL   + K+ MDV+FGN
Sbjct: 68  NPQTLNFQGLLWKSALGFLLLDAYRILVLTRSEEEWGLSMSFSSLFWRFSKILMDVLFGN 127


>ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|223545582|gb|EEF47086.1| arv1,
           putative [Ricinus communis]
          Length = 187

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/139 (57%), Positives = 95/139 (68%)
 Frame = +2

Query: 2   CGFPLKSLYIQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKGKVYRHLFYNMF 181
           CGF +KSLY+QYSPGNIRLMKCE CK VADEYIECE MI++IDLILHK K YRHL YN+ 
Sbjct: 7   CGFGVKSLYVQYSPGNIRLMKCENCKAVADEYIECEFMIMLIDLILHKPKAYRHLLYNVL 66

Query: 182 TRETLNFEVWLWKLAFGFLILDTYKMFVLSRIEDGLKSSMSFASLISCYGKLFMDVVFGN 361
            +ET+N E  +WK A  FL+LD Y+  +L R  +   SS+SF SL     K+FMDV  GN
Sbjct: 67  NQETVNLEGLIWKSAISFLLLDAYRSILLQRNVEEQVSSLSFPSLFWRSQKIFMDVFLGN 126

Query: 362 XXXXXXXXXGIRVLTKASV 418
                      R+L KASV
Sbjct: 127 LTFLCVFLLATRILLKASV 145


>ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  155 bits (393), Expect = 3e-36
 Identities = 72/139 (51%), Positives = 97/139 (69%)
 Frame = +2

Query: 2   CGFPLKSLYIQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKGKVYRHLFYNMF 181
           CGFP+K+L++QYSPGNIRLM+CE CK VADEYIECE MI++IDLILHK K YRHL +N+ 
Sbjct: 8   CGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVI 67

Query: 182 TRETLNFEVWLWKLAFGFLILDTYKMFVLSRIEDGLKSSMSFASLISCYGKLFMDVVFGN 361
            + T+NFE  LWK  F FL+LD Y+  +L R E    SSMSF+S++  + ++ +DV  GN
Sbjct: 68  NQHTVNFEGSLWKSIFAFLLLDAYRSLLLKRNEGEWGSSMSFSSIVWTFEEVIVDVFVGN 127

Query: 362 XXXXXXXXXGIRVLTKASV 418
                     +R++   S+
Sbjct: 128 FVFFCIFLLSMRLMLNTSI 146


>ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 247

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/120 (59%), Positives = 87/120 (72%)
 Frame = +2

Query: 2   CGFPLKSLYIQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKGKVYRHLFYNMF 181
           CG P+K+LY+QYSPGNIRLMKCE CK VADEYIECE MIL IDLILHK K YRHL +N+ 
Sbjct: 8   CGCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILAIDLILHKPKAYRHLLHNVI 67

Query: 182 TRETLNFEVWLWKLAFGFLILDTYKMFVLSRIEDGLKSSMSFASLISCYGKLFMDVVFGN 361
            +ET+ F+  LWKLA  FL  + Y+  +L   +  L SSMS +  +S   K+ MDV+FGN
Sbjct: 68  NQETMKFQGLLWKLAVIFLFFEYYRCLILESSKGKLDSSMSVSPSVSICWKVLMDVLFGN 127


>ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 250

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/120 (59%), Positives = 88/120 (73%)
 Frame = +2

Query: 2   CGFPLKSLYIQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKGKVYRHLFYNMF 181
           C  P+K+LY+QYSPGNIRLMKCE CK VADEYIECE MILVIDLILHK K YRHL +N+ 
Sbjct: 8   CWCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILVIDLILHKPKAYRHLLHNVI 67

Query: 182 TRETLNFEVWLWKLAFGFLILDTYKMFVLSRIEDGLKSSMSFASLISCYGKLFMDVVFGN 361
            +ET+ F   LWKLA  FL+ ++Y+  +L   +  L SS S +SL+S   K+ MDV+ GN
Sbjct: 68  NQETMKFHGLLWKLAVIFLLFESYRCLILESSKGKLGSSNSVSSLVSICWKVLMDVIIGN 127


Top