BLASTX nr result

ID: Cnidium21_contig00024225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024225
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associat...   212   4e-53
ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-...   197   1e-48
ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arab...   194   1e-47
ref|XP_002519434.1| conserved hypothetical protein [Ricinus comm...   191   8e-47
ref|XP_002323492.1| predicted protein [Populus trichocarpa] gi|2...   187   9e-46

>ref|XP_002263868.1| PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 2
           [Vitis vinifera] gi|297740010|emb|CBI30192.3| unnamed
           protein product [Vitis vinifera]
          Length = 233

 Score =  212 bits (539), Expect = 4e-53
 Identities = 105/139 (75%), Positives = 120/139 (86%)
 Frame = +3

Query: 3   YNQLLLSLDMVRTQNHVRDELKNETLQLARNNLEKESYLMELQNQCRIIRTTELATAQEK 182
           YNQLLLSLD V+ QN++RDEL+ ETLQLAR NLEKE  ++EL+NQCRIIRTTELA AQEK
Sbjct: 95  YNQLLLSLDQVKIQNNLRDELRKETLQLARENLEKEPQIVELRNQCRIIRTTELAAAQEK 154

Query: 183 LNELERQKAEIMKFYSPASLLHHIQVDLNNIEEESETLHKQLLDKECDLPVFVQKYKKLR 362
           LNELERQK EI+KFYSPA LLH +Q  +N  EEESETLH+QLLD+E DL  FVQKYK+LR
Sbjct: 155 LNELERQKEEILKFYSPACLLHRLQETMNKTEEESETLHRQLLDREMDLGAFVQKYKRLR 214

Query: 363 NTYHKRSLTHLAAKTSLTG 419
            TYH+R+LTHLAAKTS TG
Sbjct: 215 TTYHRRALTHLAAKTSSTG 233


>ref|NP_190880.1| vacuolar protein-sorting-associated protein 37-1 [Arabidopsis
           thaliana] gi|75202732|sp|Q9SCP9.1|VP371_ARATH RecName:
           Full=Vacuolar protein-sorting-associated protein 37
           homolog 1; Short=AtVPS37-1; AltName: Full=ESCRT-I
           complex subunit VPS37 homolog 1
           gi|6630732|emb|CAB64215.1| putative protein [Arabidopsis
           thaliana] gi|332645518|gb|AEE79039.1| vacuolar
           protein-sorting-associated protein 37-1 [Arabidopsis
           thaliana]
          Length = 217

 Score =  197 bits (500), Expect = 1e-48
 Identities = 96/136 (70%), Positives = 114/136 (83%)
 Frame = +3

Query: 3   YNQLLLSLDMVRTQNHVRDELKNETLQLARNNLEKESYLMELQNQCRIIRTTELATAQEK 182
           Y Q LLSLD V+ QN+++DEL+ ETLQLAR+NLEKE  +MEL+NQCRIIRTTELATAQEK
Sbjct: 80  YQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIMELRNQCRIIRTTELATAQEK 139

Query: 183 LNELERQKAEIMKFYSPASLLHHIQVDLNNIEEESETLHKQLLDKECDLPVFVQKYKKLR 362
           LNELERQK EI+KFYSP SLLH +Q  +N ++EESE L ++ L+KE D   FVQKYKKLR
Sbjct: 140 LNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLR 199

Query: 363 NTYHKRSLTHLAAKTS 410
            TYH+R+L HLAAKTS
Sbjct: 200 TTYHRRALIHLAAKTS 215


>ref|XP_002877902.1| hypothetical protein ARALYDRAFT_906697 [Arabidopsis lyrata subsp.
           lyrata] gi|297323740|gb|EFH54161.1| hypothetical protein
           ARALYDRAFT_906697 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  194 bits (492), Expect = 1e-47
 Identities = 95/136 (69%), Positives = 112/136 (82%)
 Frame = +3

Query: 3   YNQLLLSLDMVRTQNHVRDELKNETLQLARNNLEKESYLMELQNQCRIIRTTELATAQEK 182
           Y Q LLSLD V+ QN+++DEL+ ETLQLAR NLEKE  +MEL+NQCRIIRTTELA AQEK
Sbjct: 80  YQQFLLSLDQVKIQNNIKDELRRETLQLARENLEKEPQIMELRNQCRIIRTTELAAAQEK 139

Query: 183 LNELERQKAEIMKFYSPASLLHHIQVDLNNIEEESETLHKQLLDKECDLPVFVQKYKKLR 362
           LNELERQK EI+KFYSP SLLH +Q  +N ++EESE L ++ L+KE D   FVQKYKKLR
Sbjct: 140 LNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTVAFVQKYKKLR 199

Query: 363 NTYHKRSLTHLAAKTS 410
            TYH+R+L HLAAKTS
Sbjct: 200 TTYHRRALIHLAAKTS 215


>ref|XP_002519434.1| conserved hypothetical protein [Ricinus communis]
           gi|223541297|gb|EEF42848.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  191 bits (485), Expect = 8e-47
 Identities = 96/139 (69%), Positives = 115/139 (82%)
 Frame = +3

Query: 3   YNQLLLSLDMVRTQNHVRDELKNETLQLARNNLEKESYLMELQNQCRIIRTTELATAQEK 182
           Y+Q LLSLD V+ QN++RDEL+ ETLQLAR+NLEKE  + EL+NQCRIIRTTELATAQEK
Sbjct: 91  YHQFLLSLDQVKIQNNIRDELRKETLQLARDNLEKEPQINELRNQCRIIRTTELATAQEK 150

Query: 183 LNELERQKAEIMKFYSPASLLHHIQVDLNNIEEESETLHKQLLDKECDLPVFVQKYKKLR 362
           LNELE+QK E+++  SPASLL  +Q  +N  +EESE LHKQLLD+E +L  FVQKYKKLR
Sbjct: 151 LNELEKQKEEMLRSCSPASLLQRLQEAINKTDEESEILHKQLLDREIELLAFVQKYKKLR 210

Query: 363 NTYHKRSLTHLAAKTSLTG 419
            TYH+R+L HLA KTS TG
Sbjct: 211 ATYHRRTLIHLAGKTSSTG 229


>ref|XP_002323492.1| predicted protein [Populus trichocarpa] gi|222868122|gb|EEF05253.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  187 bits (476), Expect = 9e-46
 Identities = 94/139 (67%), Positives = 111/139 (79%)
 Frame = +3

Query: 3   YNQLLLSLDMVRTQNHVRDELKNETLQLARNNLEKESYLMELQNQCRIIRTTELATAQEK 182
           Y+Q LLSLD V+ QN++RDEL  ETLQLAR NLEKE  +MEL+NQCRIIRTTELA AQEK
Sbjct: 92  YHQFLLSLDQVKIQNNIRDELCKETLQLARENLEKEPRIMELRNQCRIIRTTELAAAQEK 151

Query: 183 LNELERQKAEIMKFYSPASLLHHIQVDLNNIEEESETLHKQLLDKECDLPVFVQKYKKLR 362
           LNELE+QK E+++  SPAS+L  +Q  +N  EEES+  H+Q L+KE DL  FVQKYKKLR
Sbjct: 152 LNELEKQKEELLRSCSPASILQRLQEAMNKTEEESDAFHRQFLEKEMDLGAFVQKYKKLR 211

Query: 363 NTYHKRSLTHLAAKTSLTG 419
            TYHKR+L HLAAK S TG
Sbjct: 212 TTYHKRALIHLAAKASPTG 230


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