BLASTX nr result
ID: Cnidium21_contig00024186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00024186
(1722 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27295.3| unnamed protein product [Vitis vinifera] 266 2e-68
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ... 266 2e-68
ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2... 256 2e-65
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu... 248 5e-63
ref|XP_004165617.1| PREDICTED: ninja-family protein AFP1-like [C... 245 2e-62
>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 266 bits (679), Expect = 2e-68
Identities = 160/315 (50%), Positives = 205/315 (65%), Gaps = 8/315 (2%)
Frame = -2
Query: 1172 RFGVNKTSNSLIRSSSIAGTIPLVRDEIEXXXXXXXXXXPYASLVRTSSLPVETEEEWRK 993
RFGV+K+ L+RSSSIAG+I + RDE Y+SL+RTSSLP ET+EEWRK
Sbjct: 46 RFGVDKSEKKLMRSSSIAGSIGITRDE----DALVTPAVSYSSLMRTSSLPTETQEEWRK 101
Query: 992 RKEIQSFRRMAAKRRRSEKQRAGKGGASGEI-EVNSKGKGEREQYIADMTKVGSS-ATPQ 819
RKE+Q+ RRM AKRRRSEKQR +G E +++S G R V ++ +
Sbjct: 102 RKELQTLRRMEAKRRRSEKQRNKEGCVEDEKRDLDSPIVGFRSNIEKAHHYVAANRSAAA 161
Query: 818 FGVPSWAAAAKQAILGVG---IEALIGRGKINSDFGDGGSGSIMKEASGLELEKKPIEG- 651
FG P+WAAAA A G G ++ + + S GGS S M E LE KP++G
Sbjct: 162 FGFPTWAAAAAAA-KGKGSGSLQNFVQQTSQGSGESQGGSSSSMSE-----LESKPLQGY 215
Query: 650 STCGDM-SRASAPSVPDQNSQTTVDSARTQGANTASKPSGAEMDDPSKNSDAAASR-RKS 477
S+CG+ S A S+ +Q+ Q S+RT+ + SGAEM++PSKN + +R R S
Sbjct: 216 SSCGEARSLACNQSLQEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGS 275
Query: 476 ELNSLEDMPSVFTKGDGPNGRRIEGILYKYGKGEDVRIMCVCHGTFHSPAGFVKHAGGTD 297
+N + DMP VFT+GDGPNGRRIEGILYKYGKGE+VRIMCVCHG+F SPA FVKHAGG D
Sbjct: 276 GMNFMGDMPCVFTRGDGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGD 335
Query: 296 INHPLKHIVVNPNSS 252
+ HPL+HIVVNP+S+
Sbjct: 336 VAHPLRHIVVNPSSA 350
>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
Length = 360
Score = 266 bits (679), Expect = 2e-68
Identities = 160/315 (50%), Positives = 205/315 (65%), Gaps = 8/315 (2%)
Frame = -2
Query: 1172 RFGVNKTSNSLIRSSSIAGTIPLVRDEIEXXXXXXXXXXPYASLVRTSSLPVETEEEWRK 993
RFGV+K+ L+RSSSIAG+I + RDE Y+SL+RTSSLP ET+EEWRK
Sbjct: 53 RFGVDKSEKKLMRSSSIAGSIGITRDE----DALVTPAVSYSSLMRTSSLPTETQEEWRK 108
Query: 992 RKEIQSFRRMAAKRRRSEKQRAGKGGASGEI-EVNSKGKGEREQYIADMTKVGSS-ATPQ 819
RKE+Q+ RRM AKRRRSEKQR +G E +++S G R V ++ +
Sbjct: 109 RKELQTLRRMEAKRRRSEKQRNKEGCVEDEKRDLDSPIVGFRSNIEKAHHYVAANRSAAA 168
Query: 818 FGVPSWAAAAKQAILGVG---IEALIGRGKINSDFGDGGSGSIMKEASGLELEKKPIEG- 651
FG P+WAAAA A G G ++ + + S GGS S M E LE KP++G
Sbjct: 169 FGFPTWAAAAAAA-KGKGSGSLQNFVQQTSQGSGESQGGSSSSMSE-----LESKPLQGY 222
Query: 650 STCGDM-SRASAPSVPDQNSQTTVDSARTQGANTASKPSGAEMDDPSKNSDAAASR-RKS 477
S+CG+ S A S+ +Q+ Q S+RT+ + SGAEM++PSKN + +R R S
Sbjct: 223 SSCGEARSLACNQSLQEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGS 282
Query: 476 ELNSLEDMPSVFTKGDGPNGRRIEGILYKYGKGEDVRIMCVCHGTFHSPAGFVKHAGGTD 297
+N + DMP VFT+GDGPNGRRIEGILYKYGKGE+VRIMCVCHG+F SPA FVKHAGG D
Sbjct: 283 GMNFMGDMPCVFTRGDGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGD 342
Query: 296 INHPLKHIVVNPNSS 252
+ HPL+HIVVNP+S+
Sbjct: 343 VAHPLRHIVVNPSSA 357
>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
predicted protein [Populus trichocarpa]
Length = 335
Score = 256 bits (653), Expect = 2e-65
Identities = 154/309 (49%), Positives = 196/309 (63%), Gaps = 4/309 (1%)
Frame = -2
Query: 1172 RFGVNKTSNSLIRSSSIAGTIPLVRDEIEXXXXXXXXXXPYASLVRTSSLPVETEEEWRK 993
RFGV+KTS L RSSSIAG+IPL+RD Y L+RTSSLP ETEEEWRK
Sbjct: 51 RFGVDKTSEKLTRSSSIAGSIPLLRDH----DALSTPPVSYPFLIRTSSLPTETEEEWRK 106
Query: 992 RKEIQSFRRMAAKRRRSEKQRAGKGGASGEIEVNSKGKGEREQYIADMTKVGSSATPQFG 813
RKE QS RRM AKRRRSEKQ+ +G + E +KG
Sbjct: 107 RKENQSLRRMEAKRRRSEKQKNLRGELNLEEVKLNKGNW--------------------- 145
Query: 812 VPSWAAAAKQAILGVGIEALIGRGKINSDFGDGGSGSIMKEASGL-ELEKKPIEGSTCGD 636
VP+WA KQ+ GV + G+ G S+ +SGL E+E KP++GS+ G
Sbjct: 146 VPTWAN--KQS--GVVNRSSNLEGQQQQQGSRGSVESLGGSSSGLSEMESKPVQGSSSGG 201
Query: 635 MSR--ASAPSVPDQNSQTTVDSARTQGANTASKPSGAEMDDPSKNSDAAASR-RKSELNS 465
+R AS S+ +++SQ V S+ T+ A + S E ++ SK D+A +R R+ N+
Sbjct: 202 EARSPASNQSLQERSSQEAVGSSGTKKIENACRASRTEPENLSKKLDSAENRGREIGTNA 261
Query: 464 LEDMPSVFTKGDGPNGRRIEGILYKYGKGEDVRIMCVCHGTFHSPAGFVKHAGGTDINHP 285
+EDMP VFTKGDGPNGRR++GILYKYGKGE+VRIMCVCHG+FHSPA FVKHAGG+D++HP
Sbjct: 262 MEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHGSFHSPAEFVKHAGGSDVDHP 321
Query: 284 LKHIVVNPN 258
L+HIVVNP+
Sbjct: 322 LRHIVVNPS 330
>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
gi|223549250|gb|EEF50739.1| RNA binding protein, putative
[Ricinus communis]
Length = 355
Score = 248 bits (632), Expect = 5e-63
Identities = 161/379 (42%), Positives = 218/379 (57%), Gaps = 9/379 (2%)
Frame = -2
Query: 1361 SKKSGKEMVNSAFD-SRIPRDLLQRFGNLKQSRLRQXXXXXXXXXXXXXXXXXXXXXXXX 1185
S S + M + + + ++ PRDLLQRF + +L+
Sbjct: 11 SSSSSRTMESLSLEINKYPRDLLQRFMSNDSQQLKTSEGEEDNTEEIELNLGLSLGG--- 67
Query: 1184 XXXGRFGVNKTSNSLIRSSSIAGTIPLVRDEIEXXXXXXXXXXPYASLVRTSSLPVETEE 1005
RFGV+KTS L RSSSIAG+IPLVRD Y L+RTSSLP ETEE
Sbjct: 68 ----RFGVDKTSKKLTRSSSIAGSIPLVRDH---DAFNTQPAVSYPLLIRTSSLPTETEE 120
Query: 1004 EWRKRKEIQSFRRMAAKRRRSEKQRAGKGGASGEIEVNSKGKG---EREQYIADMTKVGS 834
EWRKRKE+Q+ RRM AKRRRSEKQ+ GE+ + + KG R ++A
Sbjct: 121 EWRKRKEMQTLRRMEAKRRRSEKQK-NLNLNRGELSLEDERKGLNANRGNWVA------- 172
Query: 833 SATPQFGVPSWAAAAKQAILGVGIEALIGR--GKINSDFGDGGSGSIMKEASGLELEKKP 660
P+W+ + G ++ LIG+ G S GGS S + E +E KP
Sbjct: 173 --------PTWSRNVNR---GNTLQGLIGQQQGSQGSVESQGGSSSGISE-----MESKP 216
Query: 659 IEGSTCGDMSR--ASAPSVPDQNSQTTVDSARTQGANTASKPSGAEMDDPSKNSDAAASR 486
++G++ G +R AS S+ D+ +Q V S+R++ ++ S M++PS+ ++A R
Sbjct: 217 VQGTSSGGEARSPASNQSLQDRINQEAVGSSRSKTNENINRTSS--MENPSRKLESAEIR 274
Query: 485 -RKSELNSLEDMPSVFTKGDGPNGRRIEGILYKYGKGEDVRIMCVCHGTFHSPAGFVKHA 309
R+ +N +EDMP VFT GDGPNGR++EGILYKYGKGE+VRIMCVCHG+F SPA FVKHA
Sbjct: 275 GREIGMNPMEDMPCVFTIGDGPNGRKVEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHA 334
Query: 308 GGTDINHPLKHIVVNPNSS 252
GG D++HPL+HIVVN + S
Sbjct: 335 GGRDVDHPLRHIVVNTSGS 353
>ref|XP_004165617.1| PREDICTED: ninja-family protein AFP1-like [Cucumis sativus]
Length = 396
Score = 245 bits (626), Expect = 2e-62
Identities = 171/409 (41%), Positives = 221/409 (54%), Gaps = 34/409 (8%)
Frame = -2
Query: 1379 MGDDLESKKSGKEMVNSAFDSRIPRDLLQRFGNLKQSRLRQXXXXXXXXXXXXXXXXXXX 1200
MG+ + G E V S + P DLLQRF S Q
Sbjct: 1 MGEANQGGSRGMEKV-SLQTEKYPTDLLQRF---LCSNSHQTQIGRAFNEEEEEDTEEIE 56
Query: 1199 XXXXXXXXGRFGVNKTSNSLIRSSSIAGTIPLVRDEIEXXXXXXXXXXPYASLVRTSSLP 1020
GRFGV+K S LIRSSSIAGT+ L D+ A+++RTSSLP
Sbjct: 57 LNLGLSLGGRFGVDKNSKKLIRSSSIAGTMLLRDDDASTPAAVSYP----AAIIRTSSLP 112
Query: 1019 VETEEEWRKRKEIQSFRRMAAKRRRSEKQRAGKG-----GASGEIEVNSK------GKGE 873
ETEEEWRKRKE+Q+ RRM AKRRR EKQR G G SG E + G
Sbjct: 113 PETEEEWRKRKELQTLRRMEAKRRRFEKQRNKDGIGMGMGTSGCFEEERREIEGLTGLNL 172
Query: 872 REQYIADMTKVGSSATPQFGVPSWAAAAKQAILGVGIEALIGRGKINSDFGDGG------ 711
RE+ + ++ P FG+P+WAAAA+QA+ G GI IG+GK G GG
Sbjct: 173 REKRHGSC--ISTTVAPPFGLPTWAAAARQALTG-GIVDEIGKGKGGCTSGGGGGTNGGG 229
Query: 710 ------------SGSIMKEASGL-ELEKKPIEGSTCGDMSRASAPSVPDQNSQTTVDSAR 570
+ S +SG+ EL+ K I+GS+ +R+S+ + +++A
Sbjct: 230 FQGVGQPASQCSAESQGGSSSGMSELDSKQIQGSSSYGEARSSS------QERGNLEAAG 283
Query: 569 TQGANTASKPSGA---EMDDPSKNSDAAASR-RKSELNSLEDMPSVFTKGDGPNGRRIEG 402
+ G+ PS + E + SK D+ ++ R++ S+EDMP VFT GDGP+GRR+EG
Sbjct: 284 SSGSKMCDNPSASYKTETKNQSKKPDSGENKGREAGTMSMEDMPCVFTIGDGPDGRRVEG 343
Query: 401 ILYKYGKGEDVRIMCVCHGTFHSPAGFVKHAGGTDINHPLKHIVVNPNS 255
ILYKYGKGE+VRIMCVCHG F SPA FVKHAGG ++ HPL+HIVVNPNS
Sbjct: 344 ILYKYGKGEEVRIMCVCHGKFLSPAEFVKHAGGKNVAHPLRHIVVNPNS 392