BLASTX nr result

ID: Cnidium21_contig00024177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024177
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...   116   2e-24
gb|ACZ64227.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   114   8e-24
gb|ACZ64225.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   114   8e-24
gb|ACZ64224.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   114   8e-24
gb|ACZ64223.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   114   8e-24

>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/93 (62%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = -2

Query: 281 MAQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMINPNDPEENPDMFPDSXXXXXXX 102
           MAQRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKMINPNDP+ENP+MF D        
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 101 XXXXXXEIVGGKAAKPATHER--QSSRDSADPR 9
                 E VG +A +P+  E   Q   D+AD R
Sbjct: 61  SRPQPEEPVGRRAVRPSREENEYQPPNDNADRR 93


>gb|ACZ64227.1| RPM1 interacting protein 4 transcript 2 [Lactuca saligna]
          Length = 243

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/93 (61%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 281 MAQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMINPNDPEENPDMFPDSXXXXXXX 102
           MAQRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKMINPNDP+ENP+MF D        
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 101 XXXXXXEIVGGKAAKPATHER--QSSRDSADPR 9
                 E VG +A +P+  E   Q   D+A  R
Sbjct: 61  SRPQPEEPVGRRAVRPSREENEYQQPNDTAGRR 93


>gb|ACZ64225.1| RPM1 interacting protein 4 transcript 2 [Lactuca saligna]
          Length = 243

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/93 (61%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 281 MAQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMINPNDPEENPDMFPDSXXXXXXX 102
           MAQRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKMINPNDP+ENP+MF D        
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 101 XXXXXXEIVGGKAAKPATHER--QSSRDSADPR 9
                 E VG +A +P+  E   Q   D+A  R
Sbjct: 61  SRPQPEEPVGRRAVRPSREENEYQQPNDTAGRR 93


>gb|ACZ64224.1| RPM1 interacting protein 4 transcript 2 [Lactuca saligna]
          Length = 243

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/93 (61%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 281 MAQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMINPNDPEENPDMFPDSXXXXXXX 102
           MAQRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKMINPNDP+ENP+MF D        
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 101 XXXXXXEIVGGKAAKPATHER--QSSRDSADPR 9
                 E VG +A +P+  E   Q   D+A  R
Sbjct: 61  SRPQPEEPVGRRAVRPSREENEYQQPNDTAGRR 93


>gb|ACZ64223.1| RPM1 interacting protein 4 transcript 2 [Lactuca saligna]
           gi|270209082|gb|ACZ64226.1| RPM1 interacting protein 4
           transcript 2 [Lactuca saligna]
          Length = 243

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/93 (61%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 281 MAQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMINPNDPEENPDMFPDSXXXXXXX 102
           MAQRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKMINPNDP+ENP+MF D        
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 101 XXXXXXEIVGGKAAKPATHER--QSSRDSADPR 9
                 E VG +A +P+  E   Q   D+A  R
Sbjct: 61  SRPQPEEPVGRRAVRPSREENEYQQPNDTAGRR 93


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