BLASTX nr result

ID: Cnidium21_contig00024149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024149
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-19
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-19
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-19
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    62   2e-18
ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-18

>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 67.4 bits (163), Expect(2) = 2e-19
 Identities = 39/93 (41%), Positives = 57/93 (61%)
 Frame = +2

Query: 203 EGFSS*WINRFDNPDNRDVQDLFNKLIQHGTVNDYEDKFEELKALVFAKYKSLTEEYFVS 382
           E FS     RF + D  D+ + FNKLIQ   ++DY ++FEEL++L+      L E Y+VS
Sbjct: 79  EEFSQDLCRRFGSKD--DIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYVS 136

Query: 383 SFVSGLKDHIKTNVRMFRPQTMYDAVFLAKQEE 481
           SF+SGLKD IK  +++ +P  +  A   AK +E
Sbjct: 137 SFISGLKDEIKPMLKILKPARVLVAFEQAKWQE 169



 Score = 53.1 bits (126), Expect(2) = 2e-19
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +3

Query: 12  PMPKIEFPKFDGNDPKGWVIRVEQYFEFINMDDLKRVKLSGLHFEGKASVWYR-FYQSSR 188
           P+P++E   F G DP+GW+ + ++YF   ++   + +++   + EGKA VW+    + S 
Sbjct: 14  PLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSD 73

Query: 189 SNIPWKVFQAD 221
           S I W+ F  D
Sbjct: 74  SLIEWEEFSQD 84


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 67.4 bits (163), Expect(2) = 2e-19
 Identities = 39/93 (41%), Positives = 57/93 (61%)
 Frame = +2

Query: 203 EGFSS*WINRFDNPDNRDVQDLFNKLIQHGTVNDYEDKFEELKALVFAKYKSLTEEYFVS 382
           E FS     RF + D  D+ + FNKLIQ   ++DY ++FEEL++L+      L E Y+VS
Sbjct: 79  EEFSQDLCRRFGSKD--DIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYVS 136

Query: 383 SFVSGLKDHIKTNVRMFRPQTMYDAVFLAKQEE 481
           SF+SGLKD IK  +++ +P  +  A   AK +E
Sbjct: 137 SFISGLKDEIKPMLKILKPARVLVAFEQAKWQE 169



 Score = 53.1 bits (126), Expect(2) = 2e-19
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +3

Query: 12  PMPKIEFPKFDGNDPKGWVIRVEQYFEFINMDDLKRVKLSGLHFEGKASVWYR-FYQSSR 188
           P+P++E   F G DP+GW+ + ++YF   ++   + +++   + EGKA VW+    + S 
Sbjct: 14  PLPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSD 73

Query: 189 SNIPWKVFQAD 221
           S I W+ F  D
Sbjct: 74  SLIEWEEFSQD 84


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 71.6 bits (174), Expect(2) = 7e-19
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = +2

Query: 203 EGFSS*WINRFDNPDNRDVQDLFNKLIQHGTVNDYEDKFEELKALVFAKYKSLTEEYFVS 382
           E FS    NRF N     + + FNKL+Q G V++Y ++FEELK+L+ +    L E Y++S
Sbjct: 116 EKFSGAICNRFGN--RTAIVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESYYIS 173

Query: 383 SFVSGLKDHIKTNVRMFRPQTMYDAVFLAKQEE 481
           SF+SGLK+ IK  +++ +P T+  A   AK +E
Sbjct: 174 SFISGLKEDIKPMLKILKPVTLMIAFDQAKWQE 206



 Score = 47.0 bits (110), Expect(2) = 7e-19
 Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +3

Query: 15  MPKIEFPKFDGNDPKGWVIRVEQYFEFINMDDLKRVKLSGLHFEGKASVWYRFYQSS-RS 191
           +P+++   F G++P+GW+ R +++F+       + V+L+ L+ EGKA +W+  Y      
Sbjct: 52  LPRMDLTTFWGDNPRGWLRRCKKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEG 111

Query: 192 NIPWKVF 212
            + W+ F
Sbjct: 112 VVDWEKF 118


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 62.4 bits (150), Expect(2) = 2e-18
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = +3

Query: 21  KIEFPKFDGNDPKGWVIRVEQYFEFINMDDLKRVKLSGLHFEGKASVWYRFYQSSRSNIP 200
           +++FPKF+G DP GWV R +Q+F +   +   RV L+  H EGKA VW++  +++     
Sbjct: 90  RLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISS 149

Query: 201 WKVF 212
           W+ F
Sbjct: 150 WEGF 153



 Score = 54.7 bits (130), Expect(2) = 2e-18
 Identities = 33/93 (35%), Positives = 49/93 (52%)
 Frame = +2

Query: 203 EGFSS*WINRFDNPDNRDVQDLFNKLIQHGTVNDYEDKFEELKALVFAKYKSLTEEYFVS 382
           EGF      RF +    D  +   +L Q  TV DY+ +FE L      + + L E Y +S
Sbjct: 151 EGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSN----QLRGLAESYKLS 206

Query: 383 SFVSGLKDHIKTNVRMFRPQTMYDAVFLAKQEE 481
            F+SGL+++I+  VRM  P  ++ A  LAK +E
Sbjct: 207 CFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQE 239


>ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|222870020|gb|EEF07151.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 71.2 bits (173), Expect(2) = 2e-18
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = +2

Query: 203 EGFSS*WINRFDNPDNRDVQDLFNKLIQHGTVNDYEDKFEELKALVFAKYKSLTEEYFVS 382
           E FS    +RF N    D+ + FNKL+Q G V++Y  +FEELK+L+ +    L E Y++S
Sbjct: 155 EEFSRAICSRFGN--RTDIVEEFNKLMQEGDVDEYVKRFEELKSLMHSLNSLLPESYYIS 212

Query: 383 SFVSGLKDHIKTNVRMFRPQTMYDAVFLAKQEE 481
           SF+SGLK+ IK  +++ +P T+  A   AK +E
Sbjct: 213 SFISGLKEDIKPMLKILKPVTLMIAFDQAKWQE 245



 Score = 45.8 bits (107), Expect(2) = 2e-18
 Identities = 17/54 (31%), Positives = 34/54 (62%)
 Frame = +3

Query: 15  MPKIEFPKFDGNDPKGWVIRVEQYFEFINMDDLKRVKLSGLHFEGKASVWYRFY 176
           +P+++   F G++P+GW+ R  ++F+       + V+L+ L+ EGKA +W+  Y
Sbjct: 91  LPRMDLTTFWGDNPRGWLRRCNKFFKLNTTPFQRWVELASLYLEGKAEIWFEGY 144


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