BLASTX nr result

ID: Cnidium21_contig00024113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024113
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...    73   3e-11
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...    73   3e-11
ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414...    72   6e-11
sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb...    71   8e-11
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...    71   8e-11

>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116
           LG+VTIANGGVLPNIH TLLPKKVGKGK DIGSASQEF
Sbjct: 105 LGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 142


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116
           LGTVTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF
Sbjct: 102 LGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139


>ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116
           LG+VTIANGGVLPNIH TLLPKK+GKGK DIGSASQEF
Sbjct: 105 LGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 142


>sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb|CAA07234.1| histone H2A
           [Cicer arietinum]
          Length = 139

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116
           LG+VTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF
Sbjct: 102 LGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116
           LG+VTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF
Sbjct: 103 LGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 140


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