BLASTX nr result
ID: Cnidium21_contig00024113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00024113 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250... 73 3e-11 ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121... 73 3e-11 ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414... 72 6e-11 sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb... 71 8e-11 ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin... 71 8e-11 >ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone 2 [Populus trichocarpa] Length = 142 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/38 (92%), Positives = 36/38 (94%) Frame = +3 Query: 3 LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116 LG+VTIANGGVLPNIH TLLPKKVGKGK DIGSASQEF Sbjct: 105 LGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 142 >ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1| Histone H2A [Medicago truncatula] gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold [Medicago truncatula] gi|124360160|gb|ABN08176.1| Histone H2A; Histone-fold [Medicago truncatula] gi|355501355|gb|AES82558.1| Histone H2A [Medicago truncatula] gi|355501357|gb|AES82560.1| Histone H2A [Medicago truncatula] gi|388498640|gb|AFK37386.1| unknown [Medicago truncatula] Length = 139 Score = 72.8 bits (177), Expect = 3e-11 Identities = 35/38 (92%), Positives = 36/38 (94%) Frame = +3 Query: 3 LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116 LGTVTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF Sbjct: 102 LGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139 >ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone 2 [Populus trichocarpa] Length = 142 Score = 71.6 bits (174), Expect = 6e-11 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = +3 Query: 3 LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116 LG+VTIANGGVLPNIH TLLPKK+GKGK DIGSASQEF Sbjct: 105 LGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 142 >sp|O65759.1|H2AX_CICAR RecName: Full=Histone H2AX gi|3204129|emb|CAA07234.1| histone H2A [Cicer arietinum] Length = 139 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = +3 Query: 3 LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116 LG+VTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF Sbjct: 102 LGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 139 >ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max] gi|255625587|gb|ACU13138.1| unknown [Glycine max] Length = 140 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/38 (89%), Positives = 36/38 (94%) Frame = +3 Query: 3 LGTVTIANGGVLPNIHTTLLPKKVGKGKDDIGSASQEF 116 LG+VTIANGGVLPNIH TLLPKKVGKGK +IGSASQEF Sbjct: 103 LGSVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF 140