BLASTX nr result

ID: Cnidium21_contig00024107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024107
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana...   213   6e-53
ref|XP_002893698.1| hypothetical protein ARALYDRAFT_473391 [Arab...   213   6e-53
gb|AAM65181.1| unknown [Arabidopsis thaliana]                         213   6e-53
ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|2...   212   8e-53
emb|CBI31242.3| unnamed protein product [Vitis vinifera]              211   2e-52

>ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana]
           gi|10801363|gb|AAG23435.1|AC084165_1 unknown protein
           [Arabidopsis thaliana]
           gi|12321470|gb|AAG50795.1|AC074309_12 unknown protein
           [Arabidopsis thaliana] gi|14532512|gb|AAK63984.1|
           At1g32080/F3C3_12 [Arabidopsis thaliana]
           gi|20855884|gb|AAM26636.1| At1g32080/F3C3_12
           [Arabidopsis thaliana] gi|332193313|gb|AEE31434.1|
           putative membrane protein [Arabidopsis thaliana]
          Length = 512

 Score =  213 bits (541), Expect = 6e-53
 Identities = 114/152 (75%), Positives = 122/152 (80%)
 Frame = +3

Query: 3   LVRRHATEIFTAVIISALFSLYSTALVGRLVGLERYLTVSSLPRCITVALALSIASLFEV 182
           LV+RHA EIFT+VI+S +FSLYSTALVGRLVGLE  LTVS LPRCITVALALSI SLFE 
Sbjct: 361 LVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 420

Query: 183 ANSSIXXXXXXXXXXXXXNFVKVVLDKLRFQDPIARGVATASSCHGFGTAALSANEPEAL 362
            NSS+             NFV+VVLDKLR +DPIARG+ATASS HG GTAALSA EPEAL
Sbjct: 421 TNSSLTAAVVVVTGLIGANFVQVVLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEAL 480

Query: 363 PFCAIAYALTGISASLFCSVPAFRQSLLVVVG 458
           PFCAIAYALTGI  SL CSVPA RQSLL VVG
Sbjct: 481 PFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 512


>ref|XP_002893698.1| hypothetical protein ARALYDRAFT_473391 [Arabidopsis lyrata subsp.
           lyrata] gi|297339540|gb|EFH69957.1| hypothetical protein
           ARALYDRAFT_473391 [Arabidopsis lyrata subsp. lyrata]
          Length = 506

 Score =  213 bits (541), Expect = 6e-53
 Identities = 114/152 (75%), Positives = 122/152 (80%)
 Frame = +3

Query: 3   LVRRHATEIFTAVIISALFSLYSTALVGRLVGLERYLTVSSLPRCITVALALSIASLFEV 182
           LV+RHA EIFT+VI+S +FSLYSTALVGRLVGLE  LTVS LPRCITVALALSI SLFE 
Sbjct: 355 LVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 414

Query: 183 ANSSIXXXXXXXXXXXXXNFVKVVLDKLRFQDPIARGVATASSCHGFGTAALSANEPEAL 362
            NSS+             NFV+VVLDKLR +DPIARG+ATASS HG GTAALSA EPEAL
Sbjct: 415 TNSSLTAAVVVVTGLIGANFVQVVLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEAL 474

Query: 363 PFCAIAYALTGISASLFCSVPAFRQSLLVVVG 458
           PFCAIAYALTGI  SL CSVPA RQSLL VVG
Sbjct: 475 PFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 506


>gb|AAM65181.1| unknown [Arabidopsis thaliana]
          Length = 512

 Score =  213 bits (541), Expect = 6e-53
 Identities = 114/152 (75%), Positives = 122/152 (80%)
 Frame = +3

Query: 3   LVRRHATEIFTAVIISALFSLYSTALVGRLVGLERYLTVSSLPRCITVALALSIASLFEV 182
           LV+RHA EIFT+VI+S +FSLYSTALVGRLVGLE  LTVS LPRCITVALALSI SLFE 
Sbjct: 361 LVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEG 420

Query: 183 ANSSIXXXXXXXXXXXXXNFVKVVLDKLRFQDPIARGVATASSCHGFGTAALSANEPEAL 362
            NSS+             NFV+VVLDKLR +DPIARG+ATASS HG GTAALSA EPEAL
Sbjct: 421 TNSSLTAAVVVVTGLIGANFVQVVLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEAL 480

Query: 363 PFCAIAYALTGISASLFCSVPAFRQSLLVVVG 458
           PFCAIAYALTGI  SL CSVPA RQSLL VVG
Sbjct: 481 PFCAIAYALTGIFGSLLCSVPAVRQSLLAVVG 512


>ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|222841794|gb|EEE79341.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  212 bits (540), Expect = 8e-53
 Identities = 111/152 (73%), Positives = 122/152 (80%)
 Frame = +3

Query: 3   LVRRHATEIFTAVIISALFSLYSTALVGRLVGLERYLTVSSLPRCITVALALSIASLFEV 182
           LV+RHA EIFT+VI++ LFSLYSTALVGRLVGLE  LTVS +PRCITVALALSI S FE 
Sbjct: 253 LVKRHAAEIFTSVIVATLFSLYSTALVGRLVGLEPTLTVSIIPRCITVALALSIVSFFEG 312

Query: 183 ANSSIXXXXXXXXXXXXXNFVKVVLDKLRFQDPIARGVATASSCHGFGTAALSANEPEAL 362
           ANSS+             NFV+ VLDKL F+DPIARG+ATASS HG GTAALSA EPEAL
Sbjct: 313 ANSSLTAAVVVVTGLIGANFVQAVLDKLNFRDPIARGIATASSAHGLGTAALSAKEPEAL 372

Query: 363 PFCAIAYALTGISASLFCSVPAFRQSLLVVVG 458
           PFCAIAYALTGI  SLFCSVPA RQSLL ++G
Sbjct: 373 PFCAIAYALTGIFGSLFCSVPAVRQSLLAIIG 404


>emb|CBI31242.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  211 bits (536), Expect = 2e-52
 Identities = 109/152 (71%), Positives = 123/152 (80%)
 Frame = +3

Query: 3   LVRRHATEIFTAVIISALFSLYSTALVGRLVGLERYLTVSSLPRCITVALALSIASLFEV 182
           LV+RHA EIFT++IIS +FSLYSTA +GR++GLE+ LTVS LPRCITVALALSI SLFE 
Sbjct: 299 LVKRHAAEIFTSIIISTIFSLYSTAFIGRILGLEQDLTVSILPRCITVALALSIVSLFEG 358

Query: 183 ANSSIXXXXXXXXXXXXXNFVKVVLDKLRFQDPIARGVATASSCHGFGTAALSANEPEAL 362
           ANSS+             NFV+ VLDKL+F+DPIARG+ATASS HG GTAALSA EPEAL
Sbjct: 359 ANSSLTAAVVVLTGLVGANFVQAVLDKLKFRDPIARGIATASSAHGLGTAALSAKEPEAL 418

Query: 363 PFCAIAYALTGISASLFCSVPAFRQSLLVVVG 458
           PFCAIAYALTGI  SL CSVPA RQSLL +VG
Sbjct: 419 PFCAIAYALTGIFGSLLCSVPAVRQSLLAIVG 450


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