BLASTX nr result

ID: Cnidium21_contig00024103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00024103
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]   111   3e-22
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...   104   3e-20
ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...   101   3e-19
gb|ADM53764.1| S-locus F-box brothers-like protein [Malus x dome...   100   4e-19
dbj|BAJ11951.1| MdFBX2 [Malus x domestica]                            100   4e-19

>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score =  111 bits (278), Expect = 3e-22
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
 Frame = +2

Query: 29  YLPQQMIFKILSLLPVISLVQCKSVCKFWLSTITNPHFIQTHLNISNTKQPSLLNIALVL 208
           +LP ++I +ILSLLPV SL++ K VCK W   I++P F +  LN++  +   L  + L+L
Sbjct: 3   HLPNEIILEILSLLPVKSLMRFKCVCKSWRLMISDPEFAKKQLNVATKESGKLDKLRLIL 62

Query: 209 AFEAVLKDEEGSVSFVYLHFGQYSSCIKLPQQFKDTV-QFNGYCNGLVCLG--DFDNESI 379
               +        S  Y  FG YS     P +    + +  G  NGLVC+   D + ++I
Sbjct: 63  HSPYLRIKSCSLPSLFYEPFG-YSINHDYPGRDLGVINEIVGCYNGLVCISIRDMEKDTI 121

Query: 380 CVWNPSIKQFKMLPTPNKKTTWSPVKLGFGYDSVSDDYKFVRILVSSVSNVVE--AELYS 553
            VWNPSIK+ K LP+   +  +  V   FGYDS++DDYK VR++  S+++  E   E++S
Sbjct: 122 FVWNPSIKESKRLPSKPFEQLFYLVSYAFGYDSITDDYKVVRLVCCSINDSYEYHVEVFS 181

Query: 554 VNEDCWKDI 580
           +  + W+ I
Sbjct: 182 LRSNAWRKI 190


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score =  104 bits (260), Expect = 3e-20
 Identities = 99/314 (31%), Positives = 136/314 (43%), Gaps = 26/314 (8%)
 Frame = +2

Query: 26  DYLPQQMIFKILSLLPVISLVQCKSVCKFWLSTITNPHFIQTHLNISNTKQPSLLNIALV 205
           D LP +++F I   LP  +L+ C  V K W S IT+P F+ +HLN SNT      N  L+
Sbjct: 3   DSLPPEILFYIFLKLPSRTLILCTCVSKPWRSLITDPAFLLSHLNQSNTNHHRNRNRLLL 62

Query: 206 LA---FEAVLKDEEGSVSFVYLHFGQYSSCIKLPQ-QFKDTVQFNGYCNGLVCLGDFDNE 373
           L      A  K E  S+ F     G Y   +KLP   +  + +  G  NGL+CL     +
Sbjct: 63  LRRCYSTATKKAERYSLHFDSDTLGIYKE-LKLPHVNWNQSFKLVGSSNGLLCL---LGQ 118

Query: 374 SICVWNPSIKQFKMLPTPNKKTT--WSPVK--LGFGYDSVSDDYKFVRIL-------VSS 520
           +I  WNPSI++F  LP P+   T   SP K  LGFG+DS ++D+K VR++       V  
Sbjct: 119 NIFFWNPSIQRFLALPWPSDIFTVYGSPYKYALGFGFDSRANDFKLVRLVYIEGGPPVYD 178

Query: 521 VSNVVEAELYSVNEDCWKDI-------ELPKEVQRVWPFMNLIRVHAIXXXXXXXXXXXX 679
                  ELY ++   W+ I       E+ K  Q    FMN                   
Sbjct: 179 YELPPRVELYQLSTGSWRQITDSAPCYEILKS-QWTQIFMNEAVHWIAFIRSRRGFRCVI 237

Query: 680 XXFHLHNEVFDVYPYPDSVKGK--QKFTFFDFGG--CVAMIFKMVVGDGSVYSLWTLDDV 847
             FH+  E F   P PD +  +  Q       GG  CV        G+  V S+W L   
Sbjct: 238 LRFHMDGEYFSTIPLPDCLVNEFPQNLKVAMLGGELCVLQCGWYPFGNRYVSSVWMLRKY 297

Query: 848 CGKLGWTKKFDLEP 889
                WTK   ++P
Sbjct: 298 DVVESWTKILSVDP 311


>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score =  101 bits (252), Expect = 3e-19
 Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
 Frame = +2

Query: 29  YLPQQMIFKILSLLPVISLVQCKSVCKFWLSTITNPHFIQTHLNISNTKQPSLLNIALVL 208
           +LP  +I  IL  LPV  L+Q + VCK W S I++P F + H  +S T+    L  +  L
Sbjct: 29  FLPFDLITDILCRLPVKFLIQFQCVCKSWNSLISDPKFAEKHCRLSTTRLVHTLTFS-NL 87

Query: 209 AFEAVLKDEEGSVSFVYLHFGQYSSCI-KLPQQFKDTVQFNGYCNGLVCLGDFDNE---S 376
            ++ +LK       F+ L   Q +  I +L    K    F G CNG++CL   D     S
Sbjct: 88  PYKHILKSYPLHSVFIDLTTNQTAHPITQLETPSKYYFYFVGSCNGILCLLACDYAGFVS 147

Query: 377 ICVWNPSIKQFKMLPTPNKKTTWSPVKLGFGYDSVSDDYKFVRILVS--SVSNVVEAELY 550
           I +WNPSI++FK LP   K+     V  GFGYD+V+++YK V +L +  S  N  E  +Y
Sbjct: 148 IRLWNPSIRKFKELPYLQKQ---EGVMYGFGYDAVTNNYKVVVVLRACYSSGNSFEVNVY 204

Query: 551 SVNEDCWKDIEL 586
           +++ D WK +++
Sbjct: 205 TLSTDSWKSLQI 216


>gb|ADM53764.1| S-locus F-box brothers-like protein [Malus x domestica]
          Length = 392

 Score =  100 bits (250), Expect = 4e-19
 Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 44/334 (13%)
 Frame = +2

Query: 35  PQQMIFKILSLLPVISLVQCKSVCKFWLSTITNPHFIQTHLNISNTKQPS-----LLNIA 199
           P+  + +ILS LP  SL++ K + K W + I +P F+  HL IS   + S     LLN  
Sbjct: 10  PEDKVVEILSKLPPKSLIRFKCIRKSWCTIINSPSFVAKHLRISMDNKLSSTTCILLNRC 69

Query: 200 LVLAF--EAVLKDEEGSVSFV-------YLHFGQYSSCIKLPQQFKDTVQFNGYCNGLVC 352
            V  F   +  +D   S++ +        LH+      I  P + +D V+ +GYCNG+VC
Sbjct: 70  QVHVFPDRSWKQDVFWSMTNLSIDSDEHNLHYDVEDLNIPFPMEDQDNVEIHGYCNGIVC 129

Query: 353 LGDFDNESICVWNPSIKQFKMLPTPN-----------KKTTWSPVKLGFGYDSVSDDYKF 499
           +    N  +C  NP+ ++F+ LP  +            +TT+    +GFGYD  + +YK 
Sbjct: 130 VIVGKNVLLC--NPATREFRQLPNSSLLLPLPKGRFGLETTFK--GMGFGYDCKTKEYKV 185

Query: 500 VRILVSSVSNVVE--------------AELYSVNEDCWKDIELPKEVQRVW---PFMNLI 628
           VRI+ +      E              AE+Y+   + WK+I++   ++  W   P+   +
Sbjct: 186 VRIIENCDCEYSEDGESYYERILLPHTAEVYTTTANSWKEIKIDISIETRWYCIPYSCSV 245

Query: 629 RVHAIXXXXXXXXXXXXXXFHLHNEVFDVYPYPDSVKGKQKF-TFFDFGGCVAMIFKMVV 805
            +                 F L +E+F     P   +   KF   F +   V        
Sbjct: 246 YLKGFCYWFAYDNGEYVFSFDLGDEIFHRIELPSRRESDFKFYGIFLYNESVTSYCYRHE 305

Query: 806 GDGSVYSLWTLDDVCG-KLGWTKKFDLEPDLQMD 904
            D  ++ +W +DD  G K  WTK+  + P   +D
Sbjct: 306 EDCELFEIWVMDDYDGVKSSWTKQLTIGPLKDID 339


>dbj|BAJ11951.1| MdFBX2 [Malus x domestica]
          Length = 392

 Score =  100 bits (250), Expect = 4e-19
 Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 44/334 (13%)
 Frame = +2

Query: 35  PQQMIFKILSLLPVISLVQCKSVCKFWLSTITNPHFIQTHLNISNTKQPS-----LLNIA 199
           P+  + +ILS LP  SL++ K + K W + I +P F+  HL IS   + S     LLN  
Sbjct: 10  PEDKVVEILSKLPPKSLIRFKCIRKSWCTIINSPSFVAKHLRISMDNKLSSTTCILLNRC 69

Query: 200 LVLAF--EAVLKDEEGSVSFV-------YLHFGQYSSCIKLPQQFKDTVQFNGYCNGLVC 352
            V  F   +  +D   S++ +        LH+      I  P + +D V+ +GYCNG+VC
Sbjct: 70  QVHVFPDRSWKQDVFWSMTNLSIDSDEHNLHYDVEDLNIPFPMEDQDNVEIHGYCNGIVC 129

Query: 353 LGDFDNESICVWNPSIKQFKMLPTPN-----------KKTTWSPVKLGFGYDSVSDDYKF 499
           +    N  +C  NP+ ++F+ LP  +            +TT+    +GFGYD  + +YK 
Sbjct: 130 VIVGKNVLLC--NPATREFRQLPNSSLLLPLPKGRFGLETTFK--GMGFGYDCKTKEYKV 185

Query: 500 VRILVSSVSNVVE--------------AELYSVNEDCWKDIELPKEVQRVW---PFMNLI 628
           VRI+ +      E              AE+Y+   + WK+I++   ++  W   P+   +
Sbjct: 186 VRIIENCDCEYSEDGESYYERILLPHTAEVYTTTANSWKEIKIDISIETRWYCIPYSCSV 245

Query: 629 RVHAIXXXXXXXXXXXXXXFHLHNEVFDVYPYPDSVKGKQKF-TFFDFGGCVAMIFKMVV 805
            +                 F L +E+F     P   +   KF   F +   V        
Sbjct: 246 YLKGFCYWFAYDNGEYVFSFDLGDEIFHRIELPSRRESDFKFYGIFLYNESVTSYCYRHE 305

Query: 806 GDGSVYSLWTLDDVCG-KLGWTKKFDLEPDLQMD 904
            D  ++ +W +DD  G K  WTK+  + P   +D
Sbjct: 306 EDCELFEIWVMDDYDGVKSSWTKQLTIGPLKDID 339


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